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dissem_3 - ADAS-EU

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4. 84 ADAS900 SERIES TUTORIAL Explore central ADAS900 directories on home sccp gttm FG300612 dev_adas madas The data file is inside madas The executables are on bin To run them be sure that you are on your own directory and then type home sccp gttm FG300612 dev_adas madas bin lt adas9xx out gt The input file must be in your working directory copy directory home sccp gttm FG300612 DEMO to your own directory Input files are inside DEMO inputs Explanation of input files are inside DEMO tutorial Exercises 1 Create input902 dat and run adas902 out with the specific settings that you d like Think what are the mdf02 files you would like to include in the calculations Remember that the states you keep in the mdf02 file are the ones which will be conserved through the whole sequence Explore the output file Identify the metastables selected on the input 902 Create the itaus dat to obtain the maxwellian time constants from mdf33 Use IDL to produce graphical plot from the output files you will find an example of IDL program in the tutorial directory Create input903 dat and run adas903 out Explore mdf04 pass Create input904 dat and run adas904 out Look at the mdf11 files Why are the DXCD values null Look at the table 1 to know what type of terms are writen on the mdf11 files Create the new type of itaus dat to output your desired effective coefficients Plot them using IDL Create i
5. Discussions about molecular data 2 3 4 5 These discussions were maintained with R Janev and later with D Reiter R Janev proposed FG to handle RJ and DR the calculations needed in the ADAS903 for completing the collisional matrix They see it fair as an interchange for the molecular data given by them at the starting of the project and that are the grounds of the H model FG have no objection for that but he replied that now he is busy with other parts of the project and with other ADAS EU activities as experiments in ASDEX U or organization of ADAS Workshop and ADAS EU course FG thinks that in the end of the year could be a good date to work in that as RJ and DR want the cross sections and not the rates coefficients which are given automatically by ADFAS903 FG does not believe that this will take much time as it is a straightforward modification in IPMRATE routines RJ wants to obtain scaling laws from these cross sections an publish them in a FZJ internal report FG asked RJ about a date to complete his advising contract to ADAS EU and suggested November that is when both FG and RJ are free of another compromises RJ wanted for a clarification of the end date of his contract because he thinks it could have finished in April However he agrees with November RJ and DR informed FG that they would like to be referenced to the data they have provided for H2 molecular system with a book ISBN number rather as private commu
6. divertor and plasma wall interaction physics Acknowledgments The authors would like to thank R Janev and D Reiter for providing data and useful discussions FG would like to acknowledge R Guirlet and L Menchero for support and useful discussions References 1 D Tskhakaya et al Contrib Plasma Phys 48 2008 121 125 2 Escarguel et al Plasma Phys Control Fusion 43 2001 1733 1746 3 K Sawada and T Fujimoto J Appl Phys 78 1995 2913 4 D W nderlich et al J Quant Spec Rad Transfer 110 62 71 2009 5 R Janev D Reiter and U Samm Juel Report 3966 4005 4038 6 H P Summers et al Plasma Phys Control Fusion 48 2006 263 293 7 H P Summers Atomic Data and Analysis Structure User Manual 2007 8 A Burgess and H P Summers MNRAS 174 345 1976 9 A Burgess and I C Percival Adv atom molec Phys 4 1968 109 10 R Janev D Reiter and U Samm private communication 11 D E Atems and J M Wadeira J Phys B 26 1993 L759 L765 12 R Celliberto et al Physica Scripta T96 2002 32 13 M Glass Maujean At Dat amp Nucl Dat Tables 30 1984 301 311 14 P M Dehmer and W A Chupka J Chem Phys 65 1976 2243 2273 15 U Fantz and D W nderlich IAEA report INDC NDS 457 2004 Caption of figures Figure 1 H X 2 v 0 14 to H X X v 0 18 ionization effective coefficients Figure 2 H X X v 0 14 to H 1s dissociation effective coefficients
7. Click on the Selections button for the 1st composite line assembly The window with the full list of lines pops up Click on the buttons alongside the lines you wish for the numerator of the line ratio These are on off buttons Note a button is darkened when activated and the program remembers the choice you made if you have had a previous run Select transition 2 for the test Click the Done button Click on the Selections button for the 2nd composite line assembly The window with the full list of lines pops up Click on the buttons alongside the lines you wish for the numerator of the line ratio Select transition 26 for the test Click the Done button Click on the Done button to proceed to the Output options window Click on the button for Graphical Output Click on the Diagnostic Contour Plot button This brings up contour plot choices Click on the Default Contour Scaling button if not already selected Then click Done The graph pops up An object of such a plot is to detect diagnostic line ratios that is ratios senitive to density or temperature Note that the contour plot gives an overview but is coarse Example 7 6 9 Experiment with the same data set in ADAS205 but edit in a relevant range of electron temperatures and densities for the density sensitive region Proceed to form the contour pass file Now run ADAS207 with this contour pass file Try adding more lines to the two composites or changing the lines ADAS EU Course at
8. Differential Emission Measure Lunch Round table Tutorial Charge exchange spectroscopy Coffee Beam stopping and beam emission spectroscopy Lunch Tutorial Course revievv MOM Martin O Mullane HPS Hugh Summers NRB Nigel Badnell FG Francisco Guzm n ASG Alessandra Giunta LEM Luis Menchero FG FG MOM ASG MOM LFM 51 C 3 Participants ADAS EU course 2012 CEA Cadarache Email addresses martin omullane phys strath ac uk summers phys strath ac uk badnell phys strath ac uk francisco guzman cea fr luis menchero ipp mpg de alessandra giunta stfc ac uk yannick marandet univ amu fr n denharder differ nl juan huang ipp ac cn tony lefevre cea fr 52 53 ADAS EU R 13 D103 Appendix D ADAS EU course 2012b lectures and tutorial exercises adas eu lec overview of atomic structure and collisional theory 2012b first page adas eu lec callable adas 2012b first page adas eu ionisation state 2012b first page 0 adas eu ionis state 2 2012b first page 1 adas eu lec introduction of molecular model 2012b first page 2 adas eu lec ADAS special features 2012b first page 31 adas eu lec differential emission measure analvsis 2012b first pages 4 adas eu charge exchange spectroscopy 2012b first page 5 adas eu lec adas beam codes 2012b first pages ADAS EU tutl ex overview 2012b ADAS EU tut2
9. Lunch Round table 1 1 5 hrs Beam models in ADAS MOM Coffee Developments in beam models LFM Tutorial and one to one instruction Argon experiments and approach to analysis FG State of CX analysis tools MOM Coffee Tutorial Lunch Round table 1 1 5 hrs Coffee Advanced population models HPS Tutorial and one to one instruction Non interactive ADAS and fundamental data MOM Preview of molecular population models FG Tutorial Coffee Round table round up Lunch ADAS EU achievements HPS EU fostering of collaborative research RA Coffee End of course ADAS EU meeting MOM Martin O Mullane HPS Hugh Summers FG Francisco Guzman AG Alessandra Giunta LFM Luis Menchera RA Rosa Antidormi EU Commission ts icipan A 3 Part ne edoune 2e QIwOpNUE ESOJ uoISSIWWOJ ueedoJun3 IWJOPIJUV ESO yn oe urens sAyd eyun ejpuesse e Mmobse 9 apAjouyeys yo Auf geunig eJpuesse v ep bBdw ddiDo eyouaursini mobse 5 SPAJOUJBJIS yo AUN OJSUDUSJA SINT Jy eeody ueuuznD oosioueJJ NO SETO p 9u1e41S Jo Auf UBWZNS OoSIOUEJ xn oe upeas sAud O aue nuo une ul mobse 5 p o9u e1s JO AUN SUEJINIA O ULEN XN OB UJBJIS SAQAASJOWLWNS mobse 5 p 9u1e41S yo Auf siowwns yBnH wos eW EDOUNEION jsodepng uoo3 9 uoe Jo ALIN Ulo ueqoH 2 0 TZ NOAJBJpL
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12. Note the reference value and valid ranges for each of these parameters are given The reference values are good values to start with 18 Click on the Done button to proceed to the Output options window 19 Click on the button for Graphical Output Then click Done to see the graph 20 Have a look at the output text file after completion ADAS 308 Test Case 1 Move to your directory lt uid gt adas pass Start ADAS and move to the ADAS3 series menu Select ADAS308 2 Click on Central Data the data root to data class ADFOI should appear in the window alongside Click on the directory name gcx h0 in the file list window gcx h0 appears above in the selection window Click on qcx h0 old n7 dat It appears in the selection window you may need to scroll down 3 Click the Browse comments button Information of what is in the file gcx h0_old n7 dat is displayed Click Done to restore the Input window Click Done and the ADAS308 Processing window appears 4 The Processing window is complex Note the information on donor and receiver near the top To the right enter the Atomic mass of the receiver 14 0 Remember to press return 5 Next Input the plasma parameters for example T 5 0e3 T 5 0e3 N 2 5e13 N 5 0e13 Zen 2 0 B 3 0 ADAS EU Course 26 30 March 2012 76 6 Now Select charge exchange theory This is a drop down menu Click Use input data set Note programs have built in default activation on some butto
13. Now click on Run now An Information widget appears After the calculation click on the Exit to Menu button to return to the ADAS3 series menu ADAS EU Course 26 30 March 2012 40 Tutorial session 5 examples ADAS 304 Test Case 1 2 eo Move to your directory lt uid gt adas pass Start ADAS and move to the ADAS3 series menu Select ADAS304 The Input window is different from the usual Click on Central Data the data root to the data class ADF21 should appear in the window above Now enter the Group name for input files This is the directory of the look up tables of stopping data for a particular beam species Type bms93 h Remember the return Now you must decide on the mixture of impurity nuclei and hydrogen nuclei which cause the total stopping Click the button Select Ion List The button incidentally becomes Reselect Ion List on later passes through A button table pops up Click on the buttons for the nuclei you wish to include for example Be4 C6 H1 and click Done Note the Stopping Ion List Click Done to advance to the Processing Options window Click on the Fit polynomial button then type 5 in the adjacent active editable box Now move to the Stopping ion fractions Click on the Edit Table button to activate Table Editor Enter 0 1 0 1 0 8 for Be C H respectively and click Done Now Select the co ordinate type for the output graph Click the Energy button for the first try Click on
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19. CEA 9 45 10 30 Excited population structure 10 30 10 45 Coffee 10 45 12 30 Tutorial ADAS introduction series 2 12 30 13 30 Lunch 13 30 14 00 Advanced population models 14 00 15 00 Tutorial 15 00 15 30 Coffee 15 30 16 00 Charge exchange for population models Fridav 28 September 9 30 10 15 10 10 10 30 10 30 11 00 11 00 12 20 12 20 14 00 14 00 16 00 Monday 1 October 9 30 10 15 10 15 10 30 10 30 11 00 11 00 12 20 12 20 14 00 14 00 14 30 Overview of Atomic Structure and Collision Theory Coffee ADAS and fundamental data generation Tutorial ADAS series 8 Lunch Round table Embedding ADAS in other codes Coffee lonisation state Tutorial ADAS series 4 Exercise Lunch Making data for ionisation state studies MOM LFM MOM ASG HPS HPS NRB MOM MOM ASG MOM 50 14 30 16 00 Tuesday 2 October 9 30 10 15 10 15 10 30 10 30 12 20 12 20 14 00 14 00 15 00 15 00 16 00 Round table Introduction of molecular models and data in ADAS Coffee ADAS series 9 and tutorial Lunch Round table Tutorial Wednesday 3 October 9 30 10 15 10 15 10 30 10 30 11 15 12 20 14 00 14 00 15 00 15 00 16 00 Thursday 4 October 9 30 10 15 10 15 10 30 10 30 12 20 12 20 14 00 14 00 15 00 15 00 16 00 ADAS special features Coffee
20. Make sure there are no blanks The Passing file template changes accordingly It is editable 26 Select Text Output and Default File Name and click Done 27 Note the list of passing files which will be created is shown in an information widget Click OK to accept the list 28 Click on the Escape to Menu button to finish 29 Look at acd30 c pass Note that it is fully formed ADF11 unresolved type file 3 Example 1 Repeat ADAS405 but this time select the file iter test c Everything else is the same You will see a line selection choice now on the processing options window Select one of these On the Output options window you should look at the other graphs 5 Example 2 ADAS405 has a very wide scope Feel free to try it You will probably need to look at the manual to appreciate its full capabilities and the range of data which it can access ADAS EU Course at RFX 26 30 March 2012 75 Tutorial session 4 examples 1 ADF01 and ADF12 1 Explore the ADAS database for these formats Note that the specification is in the ADAS User manual appxa 01 and appxa 12 ADAS301 Test Case 2 Move to your sub directory lt uid gt adas pass Start ADAS301 3 Click on Central Data and select qgcx h0 gcx h0 old n7 dat 4 Click the Browse comments button to see the list of transitions present in the file qex hO gex h0_old n7 dat Move onto ADAS301 Processing window 5 Select Fit polynomial at the 5 level Click on t
21. P3 089 ADAS Tools for Collisional Radiative Model for Molecules F Guzm n M O Mullane and H P Summers Department of Physics University of Strathclyde Glasgow G1 1XQ UK BCEA IRFM Saint Paul lez Durance 13108 France Abstract New theoretical and computational tools for molecule collisional radiative models are presented An application to the hydrogen molecule system has been studied At the same time a structured database has been created where either fundamental cross sections and rate for individual processes as well as derived data effective coefficients have been obtained Relative populations for vibrational states of ground electronic state of H are presented and compared for the two resolutions considered electronic transitions where vibronic transitions are summed over electronic states and full vibrational resolution where the vibrational states are considered individually New reaction rates were calculated by means of impact parameter approximation PACS 52 20 Hv 34 50 Gb PSI 20 Keywords ADAS Collisional radiative model Divertor region Divertor spectroscopy Edge plasma Hydrogen molecules Molecular assisted recombination Molecular ions Vibrational states Vibrational excitation Corresponding author address CEA Cadarache 508 b4 13108 Saint Paul lez Durance France Corresponding author E mail francisco guzman cea fr Presenting author Francisco Guzm n Presenting aut
22. Replace Click on the button for Text Output Type in paper txt this is the standard text output File Name On many Output windows there is a Default File Name button You can click on it to enter paper txt as the standard text output File Name Then click Done ADAS EU Course at RFX 26 30 March 2012 30 10 The graph appears in the next window Click on Print to send a copy of the graph to the graph ps file Click Done to return to the Output Options window Click on the Exit to Menu icon at the bottom left corner to restore the ADASS series menu Finally click on the Exit button on the sub menu and main menu windows to exit ADAS 11 s to see the files You may wish to list paper txt to see its format 3 Using the Table Editor widget 1 Repeat steps l 3 above Click on Edit Table on the processing screen Table Editor pops up 2 The values in italic font are vour input data Click in anv of these boxes to edit the number within it The workstation cut paste and copv kevs operate Press the return kev on the kevboard to record anv change This is the normal editing mode 3 The set of round and square buttons below the table are designed to help in some editing tasks You must be careful to remember the sequence of operations since it is different from that on personal computers Activate the appropriate button position the mouse text cursor or drag over required digits press the return kev on the kevboard to complete th
23. There are several possible outputs but our interest is in the contents of the first passing file The first passing file is of type ADF26 and contains the tabulated population structure and effective stopping coefficients as a function of plasma parameters It should be noted that the fourth passing file contains the stopping coefficients assembled ADAS EU Course 26 30 March 2012 78 according to format ADF21 The preferred route to obtaining the stopping coefficients is via ADAS312 23 Click on the First passing file button and enter a filename Now click on Run now An Information widget appears After the calculation click on the Exit to Menu button to return to the ADAS3 series menu ADAS EU Course 26 30 March 2012 79 Tutorial session 5 examples ADAS 304 Test Case 1 2 eo Move to your directory lt uid gt adas pass Start ADAS and move to the ADAS3 series menu Select ADAS304 The Input window is different from the usual Click on Central Data the data root to the data class ADF21 should appear in the window above Now enter the Group name for input files This is the directory of the look up tables of stopping data for a particular beam species Type bms93 h Remember the return Now you must decide on the mixture of impurity nuclei and hydrogen nuclei which cause the total stopping Click the button Select Ion List The button incidentally becomes Reselect Ion List on later
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25. XCD PLT then click Done 12 Note the Select directory branch click on the button and select Central 13 Enter Year of data 96 return Enter Default year 96 14 Enter Isonuclear element symbol c 15 Note Type of master files click on the button and select Partial Note the Specify partial type code click on the button and select Resolved 16 Look at the lower section on the Line and Analysis Selection File Click on the button for User data Select the file NULL Click Done to move to the processing window 17 Click the Default temperature density values button You will need to choose an electron density 1 00E9 say and a hydrogen density 1 00 say Then click Done to move to the Output options window 18 Click the button for Graphical output Then click the button for Fractional abundance plot Finally click Done to see the graph 19 Click Done to return to the Output options screen You can Exit to menu using the icon in this program 2 ADAS 407 Test Case 1 Move back to your pass directory lt uid gt adas pass Start ADAS407 2 code can operate in interactive or automatic mode On the Analysis Choice window select Interactive 3 The code works on the adf04 files for adjacent ionisation stages These adf04 files must have recognizable Eissner configuration format In practice this restricts you to copmm lt nucchg gt libraries 4 On the upper part of the Input screen select copmm t54 Isttxel0 dat If
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30. ic denotes J resolved intermediate coupling system ls denotes a term resolution system The n case is a special bundled n system for the hydrogen like ion The degeneracy ensures very strong mixing by ion collisions which can be assumed complete Select cop98 7_ic n3 dat Click the Browse comments button Information on the content and quality of the data set can be reviewed Click Done to restore the Input window Click Done and the ADA201 Processing window appears You may select to have a polynomial fit by clicking Fit polynomial button and selecting a accuarcy in the adjacent active editable box Activate the Select Temperaturesfor output file button to obtain a numerical tabulation of results Either edit in the temperatures you wish or click the Default Temperatures Values button Click on the Done button to proceed to the Output options window and Graphical Output Click on the button for Text Output And route output to paper txt the standard text output File Name Then click Done The graph appears in the next window Click on Print to send a copy of the graph file Click Done to return to the Output Options window Click on the Exit to Menu icon at the bottom left corner to restore the ADASS series menu paper txt is not viewable with an editor until you exit 2 10 You may wish to examine the paper txt file to see its format 3 Additional exercise 3 1 Restart ADAS201 and again select the adas 7 sub dir
31. made which have continued Also at the Padua couse Dr Antidormi the overseeing scientific officer of ADAS EU at the EU Commission was able to attend and give a presentation indicating in person the Commission s interest and support of the ADAS EU international collaborative perspectives The practice adopted at ADAS EU courses of taking sufficient time for each participant to describe his her research activities in some detail to the whole group and then engage in consequential group discussion of it has proved very fruitful and unifying Amongst many the contributions of Mark Holmberg Madison Wisconsin USA and Bharathi Punyapu IPR Gandhinagar India are noted The agenda participant and presentation details are in appendices A and B The provision of facilties at REX Padua is gratefully acknowledged The CEA Cadarache course participation was a little smaller Of special note was the participation for three days of Prof Gary Ferland a noted astrophyicist who had also participated in the ADAS Workshop This laid some special emphasis on atomic modelling of dielectronic recombination in low temperature plasma and allowed fuller discussion with participants and Prof Badnell for ADAS EU a specialist course presenter in this area In the group discussions the wide ranging contribution of Juan Huang ASIPP Hefei China is noted The agenda participant and presentation details are in appendices C and D The provision of facilties at CEA Cadara
32. oe en E ee E ee 47 A ja CPC er SS e pa SD dee po sh re vap e tere 50 CI EENHEETEN b a Y SUS dey A 52 D ADAS EU course 2012b lectures and tutorial exercises 54 dar e CPC 55 aM 1 ae a t A 7 69 E EFDA JET special meeting 87 Ed Picung report x an e Quai Ee El BR Te EE EEN 87 EZ o o AA 90 F Aachen and Juelich presentations and visits by Dr Guzman 109 Fl PSLconterence presentation o oe 5 2486 e Rom Ro Ro nr 109 ADAS EU R 13 D103 EZ dueshoh visit teen so ern Farin end 123 G IAEA and IM meeting presentations by Dr O Mullane 125 G 1 TAEA NFRI 4 7 Sept 2012 Accommodating uncertainty in ADAS models and data 125 G 2 ITM Innsbruck 3 7 Dec 2012 Non Maxwellian radiated power coefficients for carbon 151 Chapter 1 Overview and milestone DSM3 As discussed in report DISSEM2 the third ADAS EU course originally scheduled for 2011 was held at REX Padua on 26 30 March 2012 to fit in with RFX operations The fourth and final course was presented at CEA Cadarache on 26 September to 4 October 2012 following the 2012 ADAS Workshop 11 ADAS EU Courses Work packages 20 1 3 and 20 2 3 The Padua course was one of the most enjoyable of the whole set of courses It brought together very motivated participants from all over the world who engaged very strongly with the spectral diagnostic impact of the material of course They came with local applications interpretations and questions Many contacts and interactions were
33. the Default Output Values button You may find a warning widget pops up If so click the Confirm button Click the button for Graphical output Finally click Done to see the graph Click Done to return to the Output options screen You may Exit to menu using the icon in this program ADAS 310 Test Case 1 2 Move to your directory lt uid gt adas pass Start ADAS and move to the ADAS3 series menu Select ADAS310 The Input window is considerably different from the usual Enter beam species details H for hydrogen and its isotopes and the atomic charge of the beam species There are two files to be selected the expansion file and the charge exchange file To select the expansion file click on the Central Data button the Data root to the data class ADF18 should appear in the window above Now select the data file bndlen_exp h0 dat To select the charge exchange file click on Central Data the Data root to data class ADFOI should appear in the window Select gcx h0 Now select the data file qcx h0 e2ptihl dat Click on the Done button to advance to the Proessing options window The control parameters of the collisional radiative calculation are organised into three groups selected in turn by the buttons general switches 1 and switches 11 General button Click on the general button to view the general parameter settings The default values are reasonable Switches I button Click on the switches I button to view the s
34. the graphical display you may like to try the Retain and Adjust buttons Again details of use are in the user manual introduction pdf ADAS EU Course at RFX 26 30 March 2012 31 Tutorial session 2 examples 1 ADF04 1 1 Explore the adas adas adf04 database Note that a summary of the data base is given in the ADAS User manual appxa 04 pdf 2 ADAS201 Test Case 2 1 2 2 2 3 2 4 2 5 2 6 Select Post Script and Enable Hard Copy and assign an output graph file 2 8 2 9 Move to your sub directory Suid adas pass Graph and text hardcopy will consequently appear here Start ADAS type adas and go to the ADAS2 series sub menu Start ADAS201 Click on Central Data the data root to data class ADF04 should appear dimmed in the window above Click on the directory name adas 7 in the datafile list window Note the designations The ic denotes J resolved intermediate coupling system ls denotes a term resolution system The n case is a special bundled n system for the hydrogen like ion The degeneracy ensures very strong mixing by ion collisions which can be assumed complete Select cop98 7_ic n3 dat Click the Browse comments button Information on the content and quality of the data set can be reviewed Click Done to restore the Input window Click Done and the ADA201 Processing window appears You may select to have a polynomial fit by clicking Fit polynomial button and s
35. the tasks or change them slightly to deal with your favourite ion The sub tasks should be considered optional and are often more difficult marked with s so don t spend too much time on them unless they are of particular interest getting the main tasks done is more important 2 Tasks 1 Use run_adas208 to explore the population structure of boron like neon e Find the approximate density where the systems switches from coronal to CR and from CR to LTE e Produce a PEC file for the system e 2 Use read adf11 to read ionisation and recombination coefficients for carbon e Plot the temperature where the ionisation and recombination rates are equal as a function of ion charge SS 3 Use run_adas405 to generate an equilibrium ionisation balance for carbon e Compare the temperature of peak abundance as a function of ion charge with the points where the rates are equal see above SSIS e Contrast run adas405 time independent with run adas406 time dependent F X X FK e See if you can feed the results into write adf19 to produce a PZD file SS 4 Use read adf15 to read data for the 18 19 1s2p P and 18 S 1s2p 3S in He like argon e Produce a contour plot over a sensible temperature and density range A e Hence show that the ratio is a useful density diagnostic 43 10 11 12 Use read ad 15 to read the PEC for the 977A line of C e Compare the power radiated in this line
36. to go into the data base and explore ADF11 a bit further Also look at the ADAS User manual entry appxa 1 1 1 ADAS405 Test Case 9 Move to your directory lt uid gt adas scripts405 Check if you have files NULL and rfx test c If not copy them both from adas adas scripts405 10 Move back to your Suid adas pass directory Start ADAS and move to the ADAS4 series menu Select ADAS405 11 The Input window is complex Note the Isonuclear Classes click the SELECT button On the drop down choice click on the buttons for ACD SCD PRB OCD XCD PLT then click Done 12 Note the Select directory branch click on the button and select Central 13 Enter Year of data 96 return Enter Default year 96 14 Enter Isonuclear element symbol c 15 Note Type of master files click on the button and select Partial Note the Specify partial type code click on the button and select Resolved 16 Look at the lower section on the Line and Analysis Selection File Click on the button for User data Select the file NULL Click Done to move to the processing window 17 Click the Default temperature density values button You will need to choose an electron density 1 00E9 say and a hydrogen density 1 00 say Then click Done to move to the Output options window 18 Click the button for Graphical output Then click the button for Fractional abundance plot Finally click Done to see the graph 19 Click Done to return to the Out
37. u6nH uoddns uo sn SVGV pue Nasyon 3WWV39O3d YMOM3VV34 HLN3A3S 28 ADAS EU R 13 DI03 NOINA NOILVAONNI NOISSIWWOO pr NY SNIGaTINng M3 NVIdOANI ZIOZ OE eAoped CTOC 9S1N0 I Na SVGV UOISSIUIUIO J ueadounq IMJOPIJUV esoy yoo no 9 snjejs auuwueiboid y91e9s91 B1ouo uoisnj ue doin3 au L 29 B 2 Tutorial exercises Tutorial session 1 examples 1 Initial set up 1 The tutorial assumes ADAS is set up for operation from your terminal and that your personal home lt uid gt adas directory and sub directories pass and defaults have been initialised The pass directory is used for data sets created by ADAS which you choose finally how to dispose of The defaults directory remembers all the settings you selected on your last run of every ADAS code Since ADAS codes may have changed if you have already used ADAS your defaults directory files may be out of date This will cause codes to crash so it may be best to delete all the files in the defaults directory and start afresh Move to the central adas file space cd home adas Look at the directories at this level is You will see the directory doc Move into it and look again cd docs ls You should see the various sub directories including bulletin and manual Move into the bulletins and look again cd bulletin Is You will see all the bulletins including the one sep25_09 pdf Br
38. window The control parameters of the collisional radiative calculation are organised into three groups selected in turn by the buttons general switches 1 and switches II General button Click on the general button to view the general parameter settings The default values are reasonable Switches I button Click on the switches I button to view the settings associated with electron collisions Working down the list set the parameters to the following 2 3 NO YES Switches II button Click on the switches 11 button to view the settings associated with the ion collisions Working down the list set the parameters to the following YES 0 YES YES Now you must decide what range of principal quantum numbers that you want to include in the calculation Click on the Representative N shells button Enter 1 and 110 as the minimum and maximum n shells Now click on the Edit Table button and enter the following values into the editor 1 2 3 4 5 6 7 8 9 10 12 15 20 30 40 50 60 70 80 90 100 Click on Done to return to the processing widget Now you need to decide the impuritv content of the target plasma Click on the Impuritv information button Now click on the Selection mode button and choose Multiple impurities Click on the Edit Table button and enter the following information into the editor H 1 0 0 9 C 12 0 0 05 Be 11 0 0 05 Click on the Done button to return to the processing window Click on the electron pr
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40. ADAS EU R 13 DI03 ADAS EU ADAS for fusion in Europe Grant 224607 Hugh Summers Martin O Mullane Francisco Guzman Luis Menchero Alessandra Giunta Dissemination report 3 6 June 2013 This document has been prepared as part of the ADAS EU Project It is subject to change without notice Please contact the authors before referencing it in peer reviewed literature Copyright The ADAS Project Dissemination report 3 Hugh Summers Martin O Mullane Francisco Guzman Luis Menchero Alessandra Giunta Department of Physics University of Strathclyde Glasgow UK Abstract The report reviews dissemination task completion for project months 36 48 It includes the third ADAS EU course which was held in Padua and the fourth ADAS EU course which was held at CEA Cadarache Contents 1 Overview and milestone DSM3 3 1 1 ADAS EU Courses Work packages 20 1 3 and 20 2 3 3 1 2 ADAS EU external visits contacts VVork packages 21 1 3 and 21 2 3 3 13 0000000007 4 A ADAS EU course 2012a announcements agenda and participants 5 ch AMIOUACEMENE cj g w pus ay EN EE PSS ak a e ka a o 6 BL ocn ML 9 Pos Z on ate Cuv e B eae Cie INO PUR at p C ue ve itus doe Sta S a dris 10 B ADAS EU course 2012a lectures and tutorial exercises 12 DIEM A ke 7 7 13 ECCL 30 C ADAS EU course 2012 announcements agenda and participants 46 Col EEN
41. Click on the button for Graphical Output Then click Done to see the graph 11 Have a look at the output text file after completion ADAS303 Test Case 12 Move to your sub directory lt uid gt adas pass Start ADAS303 13 Click on Central Data and select qef934h qef93 h c6 dat 14 Click the Browse comments button to see what is in the file gef93 h_c6 dat Move onto ADAS303 Processing window 15 Select Fit polynomial at the 5 level Click on the n 8 n 7 transition in the transition list window You will need to use the scroll bar on the right 16 Click on the Default Energy Velocity Values button A set of energies appears in the Output energies column Note the units in use You need to edit the table to change the units 17 Click on the Select supplementary plasma parameters button Now type in Output Values for Ion Density Ion Temperature Z effective and B Magnetic Note the reference value and valid ranges for each of these parameters are given The reference values are good values to start with 18 Click on the Done button to proceed to the Output options window 19 Click on the button for Graphical Output Then click Done to see the graph 20 Have a look at the output text file after completion ADAS 308 Test Case 1 Move to your directory lt uid gt adas pass Start ADAS and move to the ADAS3 series menu Select ADAS308 2 Click on Central Data the data root to data class ADFOI should appear in the win
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44. March 2012 34 Tutorial session 3 examples 1 ADAS402 Test Case 1 Move to your directory lt uid gt adas pass Start ADAS402 2 The Input window is different from the usual you have encountered so far 3 In the top part of the screen you can choose a data set to interrogate directly Try adas adfl 1 acd89 acd89 n dat for nitrogen 4 Then try to lower screen search method Select iso nuclear master c r class ACD Then enter 96 as the year 89 as the default year and n as the element Select Standard for the type for master file Click the Search button 5 On the pop up choose one of the files offered and click Select to return to the input screen 6 On the processing screen you can make the usual choices of temperature and density pairs by default or using the editor 7 Move on to the output screen and finally obtain the graph 8 You may like to go into the data base and explore ADF11 a bit further Also look at the ADAS User manual entry appxa 1 1 1 ADAS405 Test Case 9 Move to your directory lt uid gt adas scripts405 Check if you have files NULL and rfx test c If not copy them both from adas adas scripts405 10 Move back to your Suid adas pass directory Start ADAS and move to the ADAS4 series menu Select ADAS405 11 The Input window is complex Note the Isonuclear Classes click the SELECT button On the drop down choice click on the buttons for ACD SCD PRB OCD
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47. REX 26 30 March 2012 72 Example 8 6 10 Repeat the above but at the metastable selection in the ADAS205 Processing options window select the first and second levels Follow through the consequences to ADAS207 Remember to obtain a contour output file from ADAS205 6 11 Note that with two metastables we have the opportunity to shift their relative number densities from that in equilibrium Generally a dynamic ionisation balance provides this but note that disequilibrium can confuse an apparent density sensitivity ADAS EU Course at RFX 26 30 March 2012 73 Tutorial session 3 examples 1 ADAS402 Test Case 1 Move to your directory lt uid gt adas pass Start ADAS402 2 The Input window is different from the usual you have encountered so far 3 In the top part of the screen you can choose a data set to interrogate directly Try adas adfl 1 acd89 acd89 n dat for nitrogen 4 Then try to lower screen search method Select iso nuclear master c r class ACD Then enter 96 as the year 89 as the default year and n as the element Select Standard for the type for master file Click the Search button 5 On the pop up choose one of the files offered and click Select to return to the input screen 6 On the processing screen you can make the usual choices of temperature and density pairs by default or using the editor 7 Move on to the output screen and finally obtain the graph 8 You may like
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49. W o uonippe ul sonsouDeip paseq abueyoxa sjoo Huljjapow pue soisAyd aiwoze aui uo siseydwa UB aq Wm 3134 esinoo siy away B seu asinoo Buuren ng syay u e3 N IA 1 asino9 pue erep ejuawepuny 5 eg Sjepoui ojui eyep pue sapos svqv Bulppaquy y Aeq seipms weag pue abueyoxa abieyo eg ops uonesiuoi pue soitueu p uonpindoq z Aeq aen syay ajeipauuajui pue dseg T Aeq sued ant ojui si esinoo ayy au pno sinoo gung PIPURSSA Y IQ pue osayoua sin iq ueuizno uel4 JQ eueiInW O 9 W J siawuwns d H 1014 jauuosiad NI SYAV Aq aq jim esinoo au L s omL uoq asino 2102 MI SVOV AJUaJUO BAZ AqeH poy 22 Aypofold 22 sazon aseajay APJJISIA 150w EJ dud ZTOZISINOI NS UOISNJ SEPE MMM AHU m a A gt datt sjoor syewyoog AOH Ma 3Ip3 sli A 2 Agenda Monday Tuesday Wednesday Thursday Friday Welcome from Lorella Carraro RFX Introduction to ADAS MOM Interactive ADAS LFM Coffee and computer setup First Tutorial Lunch Round table l 1 5 hrs Population modelling AG Coffee Tutorial and one to one instruction Embedding ADAS in other codes MOM Ionization state AG Coffee Tutorial Lunch Round table 1 1 5 hrs Impurity transport MOM Coffee Tutorial and one to one instruction Charge exchange HPS Developments in CX data FG Coffee Tutorial
50. a copmm lt nucchg gt file is selcted then the adjacent ionised ion file is automatically selected in the lower part of the screen Otherwise you must make an explicit choice 5 On the upper left side of the Processing window click Selections You must choose the lowest level that is the ground state ADAS407 has another mode for which additional metastable choices are required 6 On the upper right side of the Processing window the same for the ionised ion 7 On the Parameter Form section select A for all items 8 On the Matching Temperature part select 2 420e 06 ADAS EU Course at RFX 26 30 March 2012 35 9 Click on the select ionising ion ground state just above the Selection button on the upper left side This sets transitions in the lower right sub window 10 You assign a bundle index to each transition in turn in the lower right editable box Return to record the value on the list You can re edit your choices 11 Choose a Specific Line Index also and then click Done 12 On the Output window select the ATOMPARS Passing File and the usual paper txt file 13 Click View graph 14 Click Done and then on the Output window click Output files and back to input 15 Exit and look at the ATOMPARS passing file 16 Note the top line of the ATOMPARS passing file There are two sets of marks Edit 10 into both these locations that is the initial and final ion charge state you have only done one stage so b
51. adas218 collisional radiative code Each type 5 adf04 file was convolved with the numerical EEDF to produce a type 4 dataset PLTs were also generated with the type 3 Maxwell average datasets to eliminate differences due to factors other than the EEDF chosen A density of 10 3cm 3 is used for the comparison The results are lines drawn as a guide 10724 r Tr TTTTTTTT TTTT T 3 Te 95 64eV Te 4 118eV 10 3 1 04 T a 10 26 E z H 1 ENTE E E di o 1 8 1 l a 10 28 _ 5 E al 3 E y 1 96 ADAS MXW f Ba d 40 9 adas208 MXW P adas218 EEDF from D T d 4eV 0 02 96eV MXW i L 1 10 uta z ii ege ia izi vi ac AAC 0 1 2 3 4 5 Carbon ionisation stage The new baseline data matches the existing central ADAS data well the discrepancies can be accounted for by the absence of projection in the new calculation and the sensitivity of the neutral stage to differences in the calculation of its atomic structure It is notable that for the PLT coefficients a superposition of existing Maxwell averaged data is more than sufficient to describe the radiated power in the plasma The ionisation balance has not been studied The CADW code in adas8 2 can be modified to produce a type 1 adf23 dataset for ionisation cross sections
52. asis for a unique and fusion relevant ADAS EU extension sub contract 16 Elaborating further discussions took place pair wise on 27 Apr to fill out the plans for the sub contract specifications 17 A discussion meeting with a presentation bv Martin was held This was designed so that the ADAS EU specialists could meet the EFDA JET user communitv so that the relevance and progress of the atomic work could be explained and so that the fusion communitv could explain their atomic data utilisation and their kev urgent needs The meeting was first addressed bv Mathias Groth from the impuritv transport modelling area Mathias explained the various usages 18 Sebastian Bresinsek gave a resume of spectral analysis work especially around influx of tungsten at JET and Juelich 19 Martin then gave a presentation attached of some of the outcomes of the ADAS ADAS EU effort and the achievements of the sub contracting specialists present There was much discussion The new figures of W photon efficiencies provoked great interest 20 The meeting strongly endorsed the pathways that the ADAS EU team and sub contractors were pursuing The impression was that the activities were very well aligned with the fusion needs The EFDA JET task force leaders Mathias and Sebastian did emphasise the current great importance of aspects such the tungsten influx and encouraged all speed H P Summers 25 June 2012 mesye gt lt Strathclyde Status of
53. auto ionization data The atomic rates are taken from ADAS adf04 format files 7 The atomic effective coefficients which are indistinguishable from the ones obtained with an atomic CR calculation are taken from ADAS adf11 formats for the temperature and density required ADAS904 also accounts for the dissociation due to the spontaneous decay to dissociative states using the Einstein coefficients Einstein coefficients Franck Condon factors and vibrational energies are stored in mdf00 format files A series of routines has been created as well to read the different formats they are called respectively xxdatm_00 xxdatm_02 xxdatm_33 xxdatm_04 and xxdatm_11 We must note that the Franck Condon regime is assumed for plasmas containing molecules H system collisional data The H system includes the molecular species and derivatives from H2 That is H gt Hz Hz H and H A new compilation of the H gt system cross section has been used for this work 10 Most of the input data collections come from a compilation in 10 together with the dissociative attachment from 11 and dissociative ionization rates from 12 The data compilation have been filtered and chosen from the literature by the authors of 10 to provide recommended sets of data The problems found are summarized bellow There are only ionization data available from ground state of H gt Even when ionization from excited ordinary states is not important in the corona
54. button and enter the following information into the editor ADAS EU Course 26 30 March 2012 80 H 1 0 0 9 C 12 0 0 05 Be 11 0 0 05 Click on the Done button to return to the processing window Click on the electron proton density scan button to choose the range of plasma densities In the usual manner enter the following values into the table editor 1 0e13 1 0 2 0e13 2 0 3 0e13 3 0 4 0e13 4 0 5 0e13 5 0 Click Done to return to the processing window Enter the value 3 as the ndex for the reference density Now click on the electron proton temperature button and enter the following values ino the text editor 1 0e3 2 0e3 3 0e3 4 0e3 5 0e3 Click on the Done button to return to the processing widget Enter the value 3 as the Index for the reference temperature Click on the beam energy scan button and eneter the following values into the table editor 2 0e4 3 0e4 4 0e4 5 0e4 6 0e4 Click on the Done button to return to the processing widget Ernter the value 3 for the Index for the reference beam energy and 1 0e8 as the Beam density Now click on Done to advance to the Output window There are several possible outputs but our interest is in the contents of the first passing file The first passing file is of type ADF26 and contains the tabulated population structure and effective stopping coefficients as a function of plasma parameters It should be noted that the fourth passing file contains the stopping coefficient
55. ces for all elements between hydrogen and zinc have been calculated with the automation tools of adas7 3 These data are available in IC and LS resolutions as type 3 Maxwell averaged and as type 5 AS intermediate format versions The type 5 files can be post processed with an adas7 3 code into type 3 and type 4 adf04 files Type 4 datasets tabulate upward and downward collision strengths convolved with a supplied EEDF The up and down versions are required since the symmetry of the Maxwell averaging is lost when forming the excitation and de excitation rates Analytical Kappa and Druyvesteyn or numerical stored in adf37 EEDFs can be used 3 Two EEDFs from kinetic code runs David Tskhakaya 10 T nn T T r rr Maxwellian Te 95eV 2 2 Te 4eV ES Te 4eV 0 02 95eV 10 T 10 105 10 rd pr WESS 1 10 100 1000 Energy eV The low temperature EEDF is characteristic of a region 0 033m from the outer divertor while the higher temperature is from a region 1 4m distant The low temperature EEDF can be approximated by a superposition of two Maxwellians note fitted by eye while the high temperature one is already approaching a Maxwell distribution 4 adas218 is a variant of the principal population code in ADAS adas208 which can use type 4 adf04 data PLT coefficients the total radiated power from the sum of all line emission from an ionisation stage were calculated with the
56. che is gratefully acknowledged The requirements of the work packages have been met 1 2 ADAS EU external visits contacts Work packages 21 1 3 and 21 2 3 A special meeting focussed on tungsten ions was held at the EFDA JET Facility Culaham Laboratory UK on 26 27 April 2012 This had a dual purpose of disseminating the information obtained in ADAS EU and its associated sub contracts on tungsten to the diagnostic and modelling task forces at EFDA JET in a joint session on 27 April As such 1t brought together task forces leaders spectroscopists and spectral analysts from EFDA JET and CCFE Culham and the specialist university teams from Strathclyde Vilnius and Mons Hainaut Secondly it brought the specialist teams together for a two day period to consider and plan on going research on tungsten ions in the light of the interests and needs of the JET fusion programme and the implications of the sub contract delivery which had already been made in this area The presentation made to the joint meeting by Dr O Mullane on the state of tungsten modelling is in appendix E The overall meeting short report is also in appendix E Dr Guzman made two visits in May 2012 firstly to present the status of the ADAS EU molecular collisional radiative modelling at the 2012 Plasma Surface Interaction Conference Aachen 21 25 May 2012 followed by a visit to FZ Juelich on 29 May 2012 to discuss the integration of the upgraded molecular database and the collisio
57. ctronic state to all vibronic states of the Ha ground electronic state are presented in fig 1 Effective ionization has a strong dependence on temperature and increases smoothly with density at the range considered Ionization processes unlike in the atomic case compete with dissociation processes The sum of effective dissociation coefficients from all vibrational states in the ground state of Hydrogen molecule is plotted in figure 2 From the differences in values we can state that dissociation is the dominant process at the plasma edge temperatures and densities The relative population of the 14 vibrational states from v 1 to v 14 in the electronic ground state of H normalized to the source term is presented for different temperatures in figures 3 and 4 These relative populations fall steeply for densities higher that 10 cm where ionization starts to increase and compete with dissociation and excitation The main difference between the two temperature cases comes from the low vibrational states v 1 and v 2 which have a higher relative population at lower velocities as can be inferred from the lesser importance of the non excitative loosing processes dissociation and ionization A fully vibrational calculation at 25 eV has been performed in order to compare with the electronic resolution case Relative populations for fully vibrational CR are presented in figure 5 in function of densities As expected relative population of vibrational stat
58. cular beam species Type bms93 h Remember the return 23 Now you must decide on the mixture of impurity nuclei and hydrogen nuclei which cause the total stopping Click the button Select lon List The button incidentally becomes Reselect Ion List on later passes through A button table pops up Click on the buttons for the nuclei you wish to include for example Be4 C6 H1 and click Done Note the Stopping Ion List Click Done to advance to the Processing Options window 24 Click on the Fit polynomial button then type 5 in the adjacent active editable box 25 Now move to the Stopping ion fractions Click on the Edit Table button to activate Table Editor Enter 0 1 0 1 0 8 for Be C H respectively and click Done 26 Now Select the co ordinate type for the output graph Click the Energy button for the first try 27 Click on the Default Output Values button You may find a warning widget pops up If so click the Confirm button 28 Click the button for Graphical output Finally click Done to see the graph 29 Click Done to return to the Output options screen You may Exit to menu using the icon in this program ADAS 310 Test Case 13 Move to your directory lt uid gt adas pass Start ADAS and move to the ADAS3 series menu Select ADAS310 14 The Input window is considerably different from the usual Enter beam species details H for hydrogen and its isotopes and the atomic charge of the beam species 15 There are two
59. dow alongside Click on the directory name gcx h0 in the file list window gcx h0 appears above in the selection window Click on qcx h0 old n7 dat It appears in the selection window you may need to scroll down 3 Click the Browse comments button Information of what is in the file gcx h0_old n7 dat is displayed Click Done to restore the Input window Click Done and the ADAS308 Processing window appears 4 The Processing window is complex Note the information on donor and receiver near the top To the right enter the Atomic mass of the receiver 14 0 Remember to press return 5 Next Input the plasma parameters for example T 5 0e3 T 5 0e3 N 2 5e13 N 5 0e13 Zen 2 0 B 3 0 ADAS EU Course 26 30 March 2012 37 6 Now Select charge exchange theory This is a drop down menu Click Use input data set Note programs have built in default activation on some buttons If the button is darkened it is activated Now Select emission measure model This is also a drop down menu Click Charge exchange 7 Now turn to the Input of beam and spectrum line information and click first on the button for Beam parameter information The appropriate table appears below for editing Click Edit to bring up Table Editor and enter appropriate values for example 0 85 8 0E4 0 12 4 0E4 0 03 2 7E4 and then Done 8 Similarly click the button for Observed spectrum lines and edit it s table Try 9 8 1 00E12 and click Done 9 Finally c
60. e Edit Table button and enter the following values into the editor 1 2 3 4 5 6 7 8 9 10 12 15 20 30 40 50 60 70 80 90 100 Click on Done to return to the processing widget Now you need to decide the impuritv content of the target plasma Click on the Impuritv information button Now click on the Selection mode button and choose Multiple impurities Click on the Edit Table button and enter the following information into the editor H 1 0 0 9 C 12 0 0 05 Be 11 0 0 05 Click on the Done button to return to the processing window Click on the electron proton density scan button to choose the range of plasma densities In the usual manner enter the following values into the table editor 1 0e13 1 0 2 0e13 2 0 3 0e13 3 0 4 0e13 4 0 5 0e13 5 0 Click Done to return to the processing window Enter the value 3 as the ndex for the reference densitv Now click on the electron proton temperature button and enter the following values ino the text editor 1 0e3 2 0e3 3 0e3 4 0e3 5 0e3 Click on the Done button to return to the processing widget Enter the value 3 as the Index for the reference temperature Click on the beam energy scan button and eneter the following values into the table editor 2 0e4 3 0e4 4 0e4 5 0e4 6 0e4 Click on the Done button to return to the processing widget Ernter the value 3 for the Index for the reference beam energy and 1 0e8 as the Beam density Now click on Done to advance to the Output window
61. e Inputs from the file to change to the new units It does not change any Output values already typed in It merely interprets Output values in the selected units 8 Press the Done button to record the changes and return to the screen from which Table Editor was initiated The Cancel button prevents the new values being substituted on return 9 You may be interested to try some of the more advanced widgets used by ADAS501 On the processing screen click Value selection by Display A description of how to use this is in the user manual introduction pdf 10 On the graphical display you may like to try the Retain and Adjust buttons Again details of use are in the user manual introduction pdf ADAS EU Course at RFX 26 30 March 2012 70 Tutorial session 2 examples 1 ADF04 1 1 Explore the adas adas adf04 database Note that a summary of the data base is given in the ADAS User manual appxa 04 pdf 2 ADAS201 Test Case 2 1 2 2 2 3 2 4 2 5 2 6 Select Post Script and Enable Hard Copy and assign an output graph file 2 8 2 9 Move to your sub directory Suid adas pass Graph and text hardcopy will consequently appear here Start ADAS type adas and go to the ADAS2 series sub menu Start ADAS201 Click on Central Data the data root to data class ADF04 should appear dimmed in the window above Click on the directory name adas 7 in the datafile list window Note the designations The
62. e n 8 gt n 7 transition of CVI e Write a program which can turn a fitted line area into a carbon concentration given a known beam energy beam density and plasma parameters SS Use read adf22 to read beam populations BMP for a hydrogen beam look at the relative populations of n 2 to n 1 as a function of energy e Combine these populations with two ADFI2 files via read adf12 and explore the variation with energy compare it with just assuming n 1 population 4 A Read beam stopping coefficients for a neutral beam passing through a hydrogen plasma with a 3 neon content e Find the dependence on the stopping as a function of neon content e Integrate a real beam over a sensible profile find the penetration depth as a function of neon concentration f FSF J A Use run_adas306 to compare active CX emission and excitation driven emission for CVI 8 7 e Plot the Doppler broadened feature see c5dp1r pro along with the components which make it up z A e Write a program which finds where the two emission processes become comparable 77 83 3 Hints Many IDL routines will give you help if you type their name followed by help e g run adas405 help Source is also available e You can search for r8ah online IDL has built in integration routines type idlhelp to see it The adas_vector function can provide help in producing lists of numbers see home adas idl adaslib util adas_vector pro
63. e negligible presence of molecular and atomic negative ions in the plasma and the practical absence of Ha recombination mechanisms into H The equations for the H system are then an N MQCD NEIL re j i N MSCD NU AN MQCD NU p dN N PDCD NS N ACD NS N QCD N 1 4 aN il 2 B E H H pan x N PDCD ou Nio v gt N DXCDyq v TN EN SCD N FEN eQCD N F ta where the cross coupling diagonal terms are the losses and are negative terms It is now possible to obtain a full equilibrium solution for the population of metastables making the left hand side members of all equations equal to zero and solving ADAS tools and data base A series Fortran routines have been created to compute molecular CR coefficients and perform full equilibrium population calculations given plasma conditions of temperature and density Fundamental data which form the input to the model and the derived CR coefficients are archived in a structured and comprehensive data base that will be available in ADAS 7 The fundamental data cross sections and rates are archived in a specific format file called mdf02 mdf stands for molecular data format A dedicated routine ADAS902 produces the Maxwellian rates from these data The results are output in the specific formats mdf33 and mdf34 which store electron impact data and ion impact data respectively They also make the input of the next main routine ADAS903 I
64. e sequence 4 The Default round button is the reset to normal editing mode The Delete button allows deletion of the value in a box leaving an emptv box the Remove button allows deletion of a value with the column then being pushed up the Insert button creates a new empty box pushing the column down These buttons stay active until you click Default 5 The Copy and Paste round buttons operate for the next immediate action only 6 Square buttons have a continuing effect until an alternative is pressed The Row_skip button causes a jump to the next editable box in a row when the return key on the keyboard is pressed Column_skip causes jumping to next box in a column Scroll up moves the whole window down Note that the window only shows ten values in a column but the whole table may be longer that this 7 Preferred Temperature units for working with may be chosen Changing units causes the Inputs from the file to change to the new units It does not change any Output values already typed in It merely interprets Output values in the selected units 8 Press the Done button to record the changes and return to the screen from which Table Editor was initiated The Cancel button prevents the new values being substituted on return 9 You may be interested to try some of the more advanced widgets used by ADAS501 On the processing screen click Value selection by Display A description of how to use this is in the user manual introduction pdf 10 On
65. eMQCD N N MACD N N MXCD N T po dN dt Y N PDCD Not 7 N PXSDCD N uo 3 ay N DXCD N a SED AN AN 777 uo uu N QCD N N XCD NA r un where the meaning of the collisional radiative terms is given in table 1 These terms depend on both temperature and density and correspond to the effective direct and CR processes Quantity Description MQCD Molecular excitation CR coefficient MSCD Molecular ionization CR coefficient MACD Molecular recombination CR coefficient MXCD Molecular cross coupling through ionization CR coefficient PDCD Partial from a molecular specie dissociation CR coefficient PXDCD Partial from a molecular specie cross coupling through recombination dissociation CR coefficient PXSDCD Partial from a molecular specie double cross coupling through molecular recombination and atomic ionization dissociation CR coefficient DXCD Partial cross coupling through atomic ionisation dissociation CR coefficient SCD Atomic ionization CR coefficient ACD Atomic recombination CR coefficient QCD Atomic excitation CR coefficient XCD Atomic cross coupling through ionization CR coefficient Table 1 Description of collisional radiative terms in equation 3 Applving the equations 3 to Hvdrogen molecule svstem it is possible to eliminate most of the cross coupling coefficients due to th
66. ectory Select the cop98 7_Istin3 dat file Browse the comments Note that this file is obtained by bundling the level resolved ic file you fist chose into terms This procedure you will observe in the comments was done by ADAS209 You may wish to try ADAS209 The operation is described in the ADAS User manual Chap3 09 4 ADASSII Test case 4 1 4 2 4 3 4 4 ADAS811 is a new and more sophisticated interrogation code on ADF04 files It allows not only display of single collision rates but comparison of such data from different ADF04 files Note this code uses the configuration information and quantum numbers to match transitions between different files If you use a non standard that is not ADAS Standard or Eissner form the code will fail to match it is quite sensitive For this test we shall compare a high grade assessed boron like ion of oxygen adas 8 cop98 8 Is o3 dat with a much older impact parameter cross section based data set copss b copss b ss o3l dat built on a SUPERSTRUCTURE calculation Select the first data set in the in the upper part of the Input window The second data set is selected in the lower part and uses a more standard Unix file selection so that files can be tested during construction when not located in your ADAS space You can choose a third file if you wish e g the Born baseline copmm 8 Is o3 dat There is only a further display screen which incorporates selection and controls At this stage we a
67. ee above SSIS e Contrast run adas405 time independent with run adas406 time dependent F X X FK e See if you can feed the results into write adf19 to produce a PZD file SS 4 Use read adf15 to read data for the 18 19 1s2p P and 18 S 1s2p 3S in He like argon e Produce a contour plot over a sensible temperature and density range A e Hence show that the ratio is a useful density diagnostic 82 10 11 12 Use read ad 15 to read the PEC for the 977A line of C e Compare the power radiated in this line with the total line power for C34 in coronal equilibrium conditions SSS Using the fortran routine r 8ah write a small Fortran program which prints out the A value of the 8p 3s transition in hydrogen e Extend the program to print out the A value of the whole n 8ton 3 transition Z e Do the same in IDL Combine run_adas405 and read_adf15 to produce an emission profile over the device fusion machine star blob of tin of your choosing e Integrate over the data to simulate a spectrometer A e Automatically produce an adaptive grid of points where the emission is highest 77 Use run adas416 to produce partitioned data using the file home ITER omullam ADAS_course partition_example dat e Modify the partition and explore how the various ions move in and out of being bundled A Use read 212 to read effective charge exchange emission coefficients for th
68. electing a accuarcy in the adjacent active editable box Activate the Select Temperaturesfor output file button to obtain a numerical tabulation of results Either edit in the temperatures you wish or click the Default Temperatures Values button Click on the Done button to proceed to the Output options window and Graphical Output Click on the button for Text Output And route output to paper txt the standard text output File Name Then click Done The graph appears in the next window Click on Print to send a copy of the graph file Click Done to return to the Output Options window Click on the Exit to Menu icon at the bottom left corner to restore the ADASS series menu paper txt is not viewable with an editor until you exit 2 10 You may wish to examine the paper txt file to see its format 3 Additional exercise 3 1 Restart ADAS201 and again select the adas 7 sub directory Select the cop98 7_Istin3 dat file Browse the comments Note that this file is obtained by bundling the level resolved ic file you fist chose into terms This procedure you will observe in the comments was done by ADAS209 You may wish to try ADAS209 The operation is described in the ADAS User manual Chap3 09 4 ADASSII Test case 4 1 4 2 4 3 4 4 ADAS811 is a new and more sophisticated interrogation code on ADF04 files It allows not only display of single collision rates but comparison of such data from different ADF04 files Note
69. ell as done for W to further similar systems perhaps up to W and to include the isoelectronic ions of hafnium tantalum and rhenium However computation time suggested that this could only be done in the ADAS EU time frame with the simpler calculation excluding 5f Hugh accepted this 6 Discussion then moved to lifting the collisional calculation from just the plane wave Born type implemented in the initial Vilnius sub contract Nigel said that this required transfer of the numerical radial orbitals Pavel confirmed that he does generate and can provide an orthogonal basis of radial wave functions With these orbitals available to autostructure Nigel can pursue alignment of the structure calculations and then lift the collisional calculation first to distorted wave and then to R matrix 7 The mechanics of the transfer would be a matter for Pavel and Nigel 8 Hugh felt that he could identify the content of a valuable follow up sub contract with Vilnius relevant to fusion and ADAS EU from the above and would prepare a document for consideration 9 The second set of discussions 26 May p m included Pascal and Patrick and centred on the Mons Hainaut work Hugh and Martin wanted to pursue the exploitation of the data transfer pathways established in the initial ADAS EU sub contract With the latter so far the refined Cowan structure coupled with its extension to the collisional regime with plane wave Born had delivered key ADAS ad
70. els appears Click on the button beside the first level Note that it darkens It is a click on click off button Then click on its Done button to restore the full Processing options window Click on the Done button to proceed to the Output options window Click on the button for Graphics to display the graphics choices then click on the button for Graphical Output Select Graph Temperature by clicking on the one you wish in the list Choose the fifth one le5 Click on the Text button to display the output data set choices Click on the Contour File button and enter contour pass in the File Name editable window Then click Done The graph pops up There are several graphs to look at Finally click Done to restore the Output options window Click the Exit to Menu icon to finish up Finally click on the Exit button on the sub menu and main menu windows to exit ADAS Note the files created includes the collection file contour pass You may wish look at its format Move to your sub directory lt uid gt adas pass Make sure you have a contour pass file there Start ADAS and go to the ADAS2 series sub menu Click with the mouse on the seventh button in adas2 series for ADAS207 The Input window for ADAS207 pops up Click on User Data the data root to you pass sub directory should appear in the window alongside Click on contour pass in the file list window It appears in the selection window Click Done and the ADAS207 Processing window appears
71. en plasma with a 3 neon content e Find the dependence on the stopping as a function of neon content e Integrate a real beam over a sensible profile find the penetration depth as a function of neon concentration f FSF J A Use run_adas306 to compare active CX emission and excitation driven emission for CVI 8 7 e Plot the Doppler broadened feature see c5dp1r pro along with the components which make it up z A e Write a program which finds where the two emission processes become comparable 77 44 3 Hints Many IDL routines will give you help if you type their name followed by help e g run adas405 help Source is also available e You can search for r8ah online IDL has built in integration routines type idlhelp to see it The adas_vector function can provide help in producing lists of numbers see home adas idl adaslib util adas_vector pro 45 Appendix C ADAS EU course 2012b announcements agenda and participants 1 ADAS EU course 2012b 2 ADAS EU course agenda 2012b 3 adas eu course participants 2012b 46 ADAS EU R 13 D103 C 1 Announcement sesinoo Guiuren NA SYAV JO aineaj ay e are sijsaiajui sjuedionred uo SUOISSNISIP ajqel Puno y SUOISS9S pewon uo spuey pue Sa n 93 Jo B aney jim ep 292 sino2 au Jo uoneinp JIN eui 10 puaye jim syuedioned yev p y dx si 1 doysyiom syav jenuue ay UIMOJJOJ Ajaye paww sulb q
72. endentiv funded The ITER engagement of ADAS EU through Dr O Mullane is described separatelv for this period in report ITER2 It is concluded that the dissemination plans of ADAS EU and the associated spread of European atomic physics influence in the fusion plasma world are continuing to progress well The requirements of the work packages have been met 1 3 Work package 26 4 3 The work package task comprises the preparation of this report Appendix A ADAS EU course 2012a announcements agenda and participants 1 ADAS EU course 2012a 2 ADAS EU course agenda 2012a 3 adas eu course participants 2012a ADAS EU R 13 D103 A 1 Announcement sallojeioqel awoy s v Je SYAY uo noedes AJOSIApE ue ui 12 0 ajqe aq JJIM aq im sjuedionmed padoy si ji asinoo au JO pua au Ag suonesijdde p uidsui juedionied s u jo awos ul JsISS a sjuedionied Jayjo pue sio m sino v MOJJE 11M uonim papin6 pue some HulpiAoid se jam se esinoo au j ereudoidde aq 1uBiuu sindui pue gep 211012 SVQV suonesidde uo yox ye Apeaipe Ajqeqoid aye pue sjapou sonsouDeip sisAjeue ewsejd UOISN ul pabebua ase asino9 ayi uo sjuedionied yev pawnsse si y tuoneo1 dde uoisny ui Buippaquua uo souepIN pue y YIM payeloosse suome no eo IWAL BIMONIS SISAJEUV pue eye g IWY SVvQv au jo abpa mouy pejrejep pue anisuayalduoo Buu nba asou 10 esinoo palojie sAISUayu UB si SIUL puno4byopg ss q60
73. enpeae geq uolsni JO 8015 DIWOJE uo SUOIJBJOQBJJOD UMO JNO WIOJ O HU JO 19edse p m pom JO abejuenpe aye 4 GvGV buinoidwi uo Y om pue ajeioqejjo9 o ajdoad 9JON lt Senbiuy29 pue spoujew jeoueuinu soueyuy 4 Steg hqns aJou UJIM p ulj 1 aie sjapow sois ud ay lt PALIBI SUILJ 10 Joseyep O UBAIG 51 y 4 lesejep uoee SoluedWOD2E lli G L Uy 4 S E1S UOIJESIUOI JUBJIJIUDIS jepou pue onsoubeip JO uonejueuws ddns Ajljenb ypy 9JON lt dn jenunuoo seofuepun Ajpenb oujjoseg 4 se oJduui eg SIT SVAV IE PI G 2 TIM Innsbruck 3 7 Dec 2012 Non Maxwellian radiated power coef ficients for carbon 151 Non Maxwellian radiated power coefficients for carbon 1 New developments in ADAS since the Kudowa code camp summer 2012 can be used to explore the effect of non Maxwellian electron energy distribution functions EEDF on various coefficients Here the behaviour of the PLT the total line power collisional radiative coefficient adf11 plt is examined Carbon is chosen as the test element 2 adas7 1 an implementation of the AUTOSTRUCTURE AS atomic structure and col lision code has been enhanced to generate distorted wave excitation data This enables a significant improvement of the existing plane wave Born based baselines data since spin changing transitions are now calculated adf04 data file for the H like to Ar like isoelectronic sequen
74. es in the ground electronic state are higher than in the electronic resolution case That can be explained due to the many more states involved in the processes that can decay to the metastables At the same time ionization and dissociation become more density dependent due to the same reason making them drop faster than in the electronic resolution case The definitive mechanism and ultimate causes of this dependence will be matter of future studies Conclusions New theoretical and computational tools for molecule collisional radiative models are presented An application to the hydrogen molecule system has been studied Dissociation coefficients present a weak dependence with density and dominate over ionization coefficient in the density range studied Ionization effective coefficients increase on density making populations fall at electronic densities higher than 10 cm Populations for the two resolutions considered electronic and fully vibrational have been compared obtaining differences due to the bigger completeness of the latter An structured database that stores fundamental and derived data have been created From this basis new spectroscopic derived data for molecular bands as Photo Emission Coefficients and SXD coefficients Ionization over eXcitation and Dissociation will be calculated in the future Predictions about dissociation products and emitted light could be tested with experiments helping to understand the particle balance in
75. ettings associated with electron collisions Working down the list set the parameters to the following 2 3 NO YES Switches II button Click on the switches 11 button to view the settings associated with the ion collisions Working down the list set the parameters to the following YES 0 YES YES Now you must decide what range of principal quantum numbers that you want to include in the calculation Click on the Representative N shells button Enter 1 and 110 as the minimum and maximum n shells Now click on the Edit Table button and enter the following values into the editor 1 2 3 4 5 6 7 8 9 10 12 15 20 30 40 50 60 70 80 90 100 Click on Done to return to the processing widget Now you need to decide the impurity content of the target plasma Click on the Impuritv information button Now click on the Selection mode button and choose Multiple impurities Click on the Edit Table button and enter the following information into the editor ADAS EU Course 26 30 March 2012 41 H 1 0 0 9 C 12 0 0 05 Be 11 0 0 05 Click on the Done button to return to the processing window Click on the electron proton density scan button to choose the range of plasma densities In the usual manner enter the following values into the table editor 1 0e13 1 0 2 0e13 2 0 3 0e13 3 0 4 0e13 4 0 5 0e13 5 0 Click Done to return to the processing window Enter the value 3 as the ndex for the reference density Now click on the electron pr
76. euuosied n3 SvGv Ag aq II esinoo ay sso Kioye1oqe auj JO san jloej jueinejsai pue euajajes ay sn o ajqe aq jim esinoo aui ui sjuedionred 3s1n09 NI SYAY au 104 abieyo ou si 5350 A1o1e1oqe au o Jason aui JO auo Ul JO XIV UI YU AIS jjim M uonepouiuioo9e NOA ji SISZIUEHJO au JOBIUOD aseald BIOLU SI puayaam ay Guunp uodsuen aijqnd Aq Jane aam au Buunp ayoesepes WOU pue XIV O HOAJIE ay Wou s snq are aiay BIUBAO1d US XIV Aqreau ui UONEJS A9 B SI l u pue SYN ajiiasiey SI UOAJIE 1sasojo ayi 1 u are ayoerepej ye v32 oi Bu jenen ay uo Spa J AD n pup UONDPOUOIIY s no BY PUSTL JJIM NO JI uuoj SI ume SANSSI SANENSIUIIPE ajajdwuio9 o 1aquiadas 19 310 99 uoneuiijuoo paau M SJOIISIA 10 si eonou pasue npe pue ayseiepeg ye jueuoduir si Anoas E 215 VAD 0 SSIDIY JU3JUO se 3 Azeh Da Apeloig 22 sajon aseajay peisiA 3s0n E t E dyd eaJ ztozesunoo ne uoisnj sepe MMW d3U ds w uoq asino 2102 NI SVAV RS A gt datt sjooL sy ewyjoog AOH MAA pI a 48 ADAS EU R 13 DI03 uoq 9 oid SYAY 9UL ETOZ S66T 14 002 Sjiejaq 1200002 aas suons nb pue s uswwod 104 66 rv S rr 8 8 147839 Je uewzn oasiouely 92U914 eougin rze rneg ures BOTET 1211805 q 9u9erepe v32 upulzne O0ISIQUBI4 A
77. f04 datasets for w W and W which are proving very important and exciting for the fusion community 10 Martin and Pascal engaged to work out an heavy on list from the historic Mons Hainaut heavy ion evaluations which would be useful for fusion and for which Cowan structure parameter optimisations were available 11 Hugh and Nigel were again enthusiastic to keep moving forward on the lifting of the collisional part of the collaboration The objective is to enable AUTOSTRUCTURE distorted wave and R matrix cross sections from Mons Hainaut structure inputs 12 Nigel pointed out that the alignment of structure calculations by the autostructure superstructure procedures and the Cowan procedures had never been done Hugh was very keen that this should be pursed 13 Nigel and Patrick discussed the problems and what needed to be done Firstly there was the transfer of orbitals to be achieved demonstrated by a minimal system such as C with all the Cowan elaborations switched off The second step would be the addition of special integrals and integral modifiers used by Cowan to autostructure These include scaling polarization a f y and T optimizing parameters Nigel thought that autostructure had the infrastructure for everything necessary to achieve this 14 Nigel and Patrick engaged to work out the details and felt that Mo would be a good test species for the interchange format 15 Hugh was content that there was a good b
78. files to be selected the expansion file and the charge exchange file To select the expansion file click on the Central Data button the Data root to the data class ADF18 should appear in the window above Now select the data file bndlen_exp h0 dat ADAS EU Course 26 30 March 2012 TI 20 21 22 To select the charge exchange file click on Central Data the Data root to data class ADFOI should appear in the window Select gcx h0 Now select the data file qcx h0 e2ptihl dat Click on the Done button to advance to the Proessing options window The control parameters of the collisional radiative calculation are organised into three groups selected in turn by the buttons general switches 1 and switches II General button Click on the general button to view the general parameter settings The default values are reasonable Switches I button Click on the switches I button to view the settings associated with electron collisions Working down the list set the parameters to the following 2 3 NO YES Switches II button Click on the switches 11 button to view the settings associated with the ion collisions Working down the list set the parameters to the following YES 0 YES YES Now you must decide what range of principal quantum numbers that you want to include in the calculation Click on the Representative N shells button Enter 1 and 110 as the minimum and maximum n shells Now click on th
79. for n 10 cm 10 Figure 3 Populations of H2 X Z v 1 14 relative H X v 0 for electronic resolution at T 25 eV Figure 4 Populations of Hx X v 1 14 relative H X v 0 for electronic resolution at T 100 eV Figure 5 Populations of H X E4 v 1 14 relative H X X v 0 for fully vibronic resolution at T 25 eV Figure 1 Q 2 z Figure 2 em s LATAS 100 Temperature eV 11 Figure 3 T 25 eV le 11 le 12 le 13 le 14 le 15 le 16 3 N cm Figure 4 le 11 le 12 le 13 le 14 le 15 le 16 3 N cm 12 Figure 5 T 25 eV e Dir vsl le 12 le 13 13 12414 3 N cm le 15 le 16 E2 Juelich visit report 123 Location Date ADAS EU Travel Report Forschungszentrum Juelich Germany 29 May 2012 ADAS EU staff Francisco Guzman Persons visited Ratko Janev Detlev Reiter Dmitry Borodin and others Purpose Ttems 1 Work visit to FZJ to present molecular model to modelers in FZJ A series of discussions were carried about the extensions and implications of ADAS molecular models and molecular data used in it They can be separated in two main discussions a discussions with D Reiter and R Janev about molecular data b disscusions with FZJ ERO code modelers about implications and possible experiments with ADAS molecular models with Dmitry Borodin
80. h for the numerator of the line ratio Select transition 26 for the test Click the Done button Click on the Done button to proceed to the Output options window Click on the button for Graphical Output Click on the Diagnostic Contour Plot button This brings up contour plot choices Click on the Default Contour Scaling button if not already selected Then click Done The graph pops up An object of such a plot is to detect diagnostic line ratios that is ratios senitive to density or temperature Note that the contour plot gives an overview but is coarse Example 7 6 9 Experiment with the same data set in ADAS205 but edit in a relevant range of electron temperatures and densities for the density sensitive region Proceed to form the contour pass file Now run ADAS207 with this contour pass file Try adding more lines to the two composites or changing the lines ADAS EU Course at REX 26 30 March 2012 33 Example 8 6 10 Repeat the above but at the metastable selection in the ADAS205 Processing options window select the first and second levels Follow through the consequences to ADAS207 Remember to obtain a contour output file from ADAS205 6 11 Note that with two metastables we have the opportunity to shift their relative number densities from that in equilibrium Generally a dynamic ionisation balance provides this but note that disequilibrium can confuse an apparent density sensitivity ADAS EU Course at RFX 26 30
81. he n 8 n 7 transition in the transition list window You will need to use the scroll bar on the right 6 Click on Select Velocities Energies for Output File button 7 Now put in default values in the Table Note the units in use It is preferred to units of eV amu You need to edit the table to change the units 8 Click on the Select Quantum Numbers for Processing button Select the 7f shell Note that you can select total and partial cross sections see the key to the right 9 Click on the Done button to proceed to the Output options window 10 Click on the button for Graphical Output Then click Done to see the graph 11 Have a look at the output text file after completion ADAS303 Test Case 12 Move to your sub directory lt uid gt adas pass Start ADAS303 13 Click on Central Data and select qef934h qef93 h c6 dat 14 Click the Browse comments button to see what is in the file gef93 h_c6 dat Move onto ADAS303 Processing window 15 Select Fit polynomial at the 5 level Click on the n 8 n 7 transition in the transition list window You will need to use the scroll bar on the right 16 Click on the Default Energy Velocity Values button A set of energies appears in the Output energies column Note the units in use You need to edit the table to change the units 17 Click on the Select supplementary plasma parameters button Now type in Output Values for Ion Density Ion Temperature Z effective and B Magnetic
82. he transition may not exist in the other files Note the tape recorder controls at the bottom The upper and lower indices of a particular transition may be entered in the editable boxes Then click Show We find it convenient to have the files open in an editor as we do the examination Print will send the displayed transition to a file via a pop up dialogue Be cautious of using the Print All button there may be a lot of electron impact excitation transitions 5 ADAS205 Test Case 3 5 5 6 IT 6 ADAS207 Test Case 6 1 6 2 6 3 6 4 6 5 6 6 6 7 6 8 Move to your sub directory Suid adas pass ADAS205 Click on Central Data Select the Be like oxygen case adas 8 cop98 8 Is o4 dat Click on the Default Temperatures button and Default Densities button Click on the Selections button for metastable states A pop up list of all the levels appears Click on the button beside the first level Note that it darkens It is a click on click off button Then click on its Done button to restore the full Processing options window Click on the Done button to proceed to the Output options window Click on the button for Graphics to display the graphics choices then click on the button for Graphical Output Select Graph Temperature by clicking on the one you wish in the list Choose the fifth one le5 Click on the Text button to display the output data set choices Click on the Contour File button and en
83. hor E mail francisco guzman Dcea fr 1 Computational tools make that process automatic and simplify the data assembly Rate coefficients versus temperature and density are presented Introduction Molecules desorbed from the wall are present in the edge of tokamak plasmas they contribute to the neutral density through dissociation and influence divertor physics changing neutral population balance 1 Experimental measurements in tokamaks show that their densities in the plasma edge can be a significant fraction of neutrals density 2 Collisional radiative CR coefficients are needed for the interpretation of measurements Present day simulation codes consider CR coefficients from hydrogen e g 3 4 and some of the hydrocarbon molecules e g 5 Under the framework of ADAS EU project a CR model for molecules is developed This model will provide the tools for homonuclear diatomic molecule population studies in plasmas and will provide spectroscopic quantities needed for experimental studies Collisional data and derived spectroscopic data are stored in a comprehensive database so that users can include them in their plasma modelling routines In the next sections the theoretical basis of the collisional radiative model is given the database structure for H molecular svstem is discussed and results are presented Collisional Radiative Model for Molecules Molecules released into the plasma edge of a tokamak will suffer collision
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85. ing up a acrobat viewer for pdf files acroread amp to look at the sep25_09 pdf bulletin Bug fix releases and the associated bulletin comes out annually or occasionally more frequently New code releases are separate and occur when ready Return to the Terminal window move into the docs subdirectory manual and list the files appxa files describe the ADAS data and the others describe the ADAS codes Use he acrobat reader to look at chap5 03 pdf and at appxa 15 pdf Move to the directory work projects adas Notice the fortran and idl subdirectories Move into fortran and list and then down into adas5xx look again Finally move down into adas501 for a final look You are now at the FORTRAN codes themselves Note hat on your own site the source fortran may not be accessible to the ordinary user Now move to the directory work projects adas adas and list This is the database itself Look down into ADAS data format adf04 Actual datasets rather than directories have the erminator dat Move back to your own pass directory cd adas pass Start up ADAS adas The main ADAS menu pops up Note that it is best to start ADAS from your sub directory lt uid gt adas pass Graph and ext hardcopy files created by ADAS will appear in the directory from which you launch ADAS 2 Starting interactive ADAS and using its general GUI widgets 1 Move to your sub directory lt uid gt adas pass Graph and text hardcopy will co
86. itself Look down into ADAS data format adf04 Actual datasets rather than directories have the erminator dat Move back to your own pass directory cd adas pass Start up ADAS adas The main ADAS menu pops up Note that it is best to start ADAS from your sub directory lt uid gt adas pass Graph and ext hardcopy files created by ADAS will appear in the directory from which you launch ADAS 2 Starting interactive ADAS and using its general GUI widgets 1 Move to your sub directory lt uid gt adas pass Graph and text hardcopy will consequently appear here Start ADAS type adas and go to the ADASS series sub menu Click with the mouse on the first button in adas5 series for ADAS501 The Input window for ADAS501 pops up Click on Central Data the data root to data class ADF13 should appear dimmed in the window above Click on the directory name sxb93 cr in the datafile list window sxb93 cr appears above in the selection window Click on sxb93 cr_llu crO dat It appears in the selection window Click the Browse comments button Information of what is in the file sxb93 cr Ilu cr0 dat is displayed Click Done to restore the Input window Click Done and the ADAS501 Processing window appears Click on the Fit polynomial button then type 5 return in the adjacent active editable box Click on the first transition at 4270 7 in the transition list window It appears in the selection window above Click on the Default Tem
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88. k on Central Data the Data root to data class ADFOI should appear in the window Select gcx h0 Now select the data file qcx h0 e2ptihl dat Click on the Done button to advance to the Proessing options window The control parameters of the collisional radiative calculation are organised into three groups selected in turn by the buttons general switches 1 and switches 11 General button Click on the general button to view the general parameter settings The default values are reasonable Switches I button Click on the switches I button to view the settings associated with electron collisions Working down the list set the parameters to the following 2 3 NO YES Switches II button Click on the switches 11 button to view the settings associated with the ion collisions Working down the list set the parameters to the following YES 0 YES YES Now you must decide what range of principal quantum numbers that you want to include in the calculation Click on the Representative N shells button Enter 1 and 110 as the minimum and maximum n shells Now click on the Edit Table button and enter the following values into the editor 1 2 3 4 5 6 7 8 9 10 12 15 20 30 40 50 60 70 80 90 100 Click on Done to return to the processing widget Now you need to decide the impurity content of the target plasma Click on the Impuritv information button Now click on the Selection mode button and choose Multiple impurities Click on the Edit Table
89. l equilibrium picture this lack of data would be enough to suppress the density dependence of the effective coefficients Furthermore there is no data available for ionization from triplet metastable There are data for dissociative excitation from ground singlet electronic state but as for ionization there is no data from triplet or excited states Available pre dissociation data have been taken from 13 and auto ionization data from 14 Basic data such as Franck Condon factors A values and vibrational energies have been taken from 15 e In the H molecular ion non dissociative recombination is negligible compared with dissociative recombination so only the latter is accounted for and given in 10 Only the ground electronic state of H is bound and every excitation is dissociative Vibrationally resolved dissociative excitation is also provided in 10 Finally inverse charge exchange processes which suppose the only path back to the neutral species is also archived but not used yet at this stage All these gaps have been filled by the calculations of ADAS903 see previous section Comparisons with previously theoretical data from 10 gave a difference of a factor 3 for excitation from ground state to low levels and 2 for excitation to high states and a two orders of magnitude overestimation of bound free processes either ionizative or dissociative The reason of this is in the nature of the ECIP approximation which does no
90. lick the button for Required emissivity prediction and edit it s table Try 9 8 1 8 7 2 7 6 2 6 5 and click Done 10 All is now ready Click Done to move to the Output options window 11 Click the button for Graphical output You may also Enable Hard Copy and Text Output Finally click Done to see the graph 12 Click Done to return to the Output options screen Click on the Exit to Menu icon to finish up Finally click on the Exit button on the sub menu and main menu windows to exit ADAS ADAS 304 Test Case 21 Move to your directory lt uid gt adas pass Start ADAS and move to the ADASS series menu Select ADAS304 22 The Input window is different from the usual Click on Central Data the data root to the data class ADF21 should appear in the window above Now enter the Group name for input files This is the directory of the look up tables of stopping data for a particular beam species Type bms93 h Remember the return 23 Now you must decide on the mixture of impurity nuclei and hydrogen nuclei which cause the total stopping Click the button Select lon List The button incidentally becomes Reselect Ion List on later passes through A button table pops up Click on the buttons for the nuclei you wish to include for example Be4 C6 H1 and click Done Note the Stopping Ion List Click Done to advance to the Processing Options window 24 Click on the Fit polynomial button then type 5 in the adjacent active editable bo
91. nal radaiive modelling derived data at Juelich The conference presentation and travel report are given appendix F Dr O Mullane as part of the dissemination from ADAS EU participated in the IAEA Technical Meeting on Atomic and Molecular Data Validation at Daejeon Korea 4 7 September 2012 The whole meeting summarv and conclusion are available as Data Evaluation for Atomic Molecular and Plasma Material Interaction Processes in Fusion a Joint IAEA NFRI Technical Meeting report https www amdis iaea org publications INDC INDC NDS 627 pdf He also participated in the Integrated Tokamak modelling meeting in Innsbruck 3 7 December The travel for both of these meetings was not funded from ADAS EU See appendix G for details of these presentations Dr O Mullane has continued with his frequent visits to ITER During the period of this report the conceptual design phase for ITER spectroscopic diagnostics has been continuing with atomic model predictions verv much required Such studies link ADAS strongly with the ITER Domestic Agency teams of the countries responsible for the design and construction of the various diagnostics Itis therefore a kev part of the dissemination programme The contact with Korea and India is of special note In particular the contact with Korea has deepend and has included a special working visit in support of transport modelling bv Stuart Henderson a PhD student of Prof Summers and Dr O Mullane to NFRI Daejeon indep
92. nication as they are near to publish their book and they have already applied for this number FG agrees to change this reference in his PSI paper and other forthcoming papers ADAS EU molecular data implications and possible experiments 6 7 8 A presentation about molecular collisional radiative model was given to Ratko Janev Dmitry Borodin Dmitry Kondratiev and Carolina Bj rkas Numerous questions about technical details were answered Relevant was the question about how to fulfill the Franck Condon unitary when calculating the new cross sections FG answered that that was already checked and that the unitary is automatic when calculating excitation cross sections in vibrational resolution This is because the IP cross sections depend of dipole moments that are related with Franck Condon factors so the weighted is automatically done Dmitry Borodin was very interested to apply the molecular model to the BeD molecule that is being studied in detail in linear devices as sputtering of Be can be in a big fraction in form of this molecule He suggested to perform experiments and calculations for it with the ADAS model We agreed to be in contact when ADAS model is well cross checked and take the data from C Bj rkas and Ratko Janev F Guzm n 5 June 2012 Appendix G IAEA and IM meeting presentations by Dr O Mullane G TAFA NFRI 4 7 Sept 2012 Accommodating uncertainty in ADAS models and data 125 z10z 1aquiajda
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95. ns If the button is darkened it is activated Now Select emission measure model This is also a drop down menu Click Charge exchange 7 Now turn to the Input of beam and spectrum line information and click first on the button for Beam parameter information The appropriate table appears below for editing Click Edit to bring up Table Editor and enter appropriate values for example 0 85 8 0E4 0 12 4 0E4 0 03 2 7E4 and then Done 8 Similarly click the button for Observed spectrum lines and edit it s table Try 9 8 1 00E12 and click Done 9 Finally click the button for Required emissivity prediction and edit it s table Try 9 8 1 8 7 2 7 6 2 6 5 and click Done 10 All is now ready Click Done to move to the Output options window 11 Click the button for Graphical output You may also Enable Hard Copy and Text Output Finally click Done to see the graph 12 Click Done to return to the Output options screen Click on the Exit to Menu icon to finish up Finally click on the Exit button on the sub menu and main menu windows to exit ADAS ADAS 304 Test Case 21 Move to your directory lt uid gt adas pass Start ADAS and move to the ADASS series menu Select ADAS304 22 The Input window is different from the usual Click on Central Data the data root to the data class ADF21 should appear in the window above Now enter the Group name for input files This is the directory of the look up tables of stopping data for a parti
96. nsequently appear here Start ADAS type adas and go to the ADASS series sub menu Click with the mouse on the first button in adas5 series for ADAS501 The Input window for ADAS501 pops up Click on Central Data the data root to data class ADF13 should appear dimmed in the window above Click on the directory name sxb93 cr in the datafile list window sxb93 cr appears above in the selection window Click on sxb93 cr_llu crO dat It appears in the selection window Click the Browse comments button Information of what is in the file sxb93 cr Ilu cr0 dat is displayed Click Done to restore the Input window Click Done and the ADAS501 Processing window appears Click on the Fit polynomial button then type 5 return in the adjacent active editable box Click on the first transition at 4270 7 in the transition list window It appears in the selection window above Click on the Default Temperatures Values button If a warning pop up appears click Confirm on it A set of density values appears in a pop up window Click on 1 000E 13 The temperature and density output values appear in the table Click on the Done button to proceed to the Output options window Click on the button for Graphical Output Select Post Script out put by clicking on it in the Select Device list window Click on the button for Enable Hard Copy Enter a File Name such as graph ps Remember to press return A warning widget appears if graph ps already exits If so click on
97. o record the value on the list You can re edit your choices 11 Choose a Specific Line Index also and then click Done 12 On the Output window select the ATOMPARS Passing File and the usual paper txt file 13 Click View graph 14 Click Done and then on the Output window click Output files and back to input 15 Exit and look at the ATOMPARS passing file 16 Note the top line of the ATOMPARS passing file There are two sets of marks Edit 10 into both these locations that is the initial and final ion charge state you have only done one stage so both are 10 4 ADAS 408 Test Case 17 Move back to your pass directory lt uid gt adas pass Start ADAS and move to the ADASA series menu Select ADAS408 18 Click on Central Data Click on atompars in the selection window and then on atompars mm ec dat This is and atomic parameter data set for carbon Choose a filter if you wish 19 Click Done to advance to the Processing options window 20 Enter a Title for Run at the top of the window 21 In the top left box enter 12 0 for the Impurity element isotopic mass and 2 0 for the Neutral hydrogen isotopic mass 22 In the lower left box for electron temperature enter Lower limit 1 0 Upper limit 100 0 No of temps 10 23 In the lower right box for electron density enter Lower limit 1 00e 10 Upper limit 1 00e 15 No of dens 11 24 Click Done to advance to the Output window 25 Enter 30 for the two digit year number
98. oth are 10 4 ADAS 408 Test Case 17 Move back to your pass directory lt uid gt adas pass Start ADAS and move to the ADASA series menu Select ADAS408 18 Click on Central Data Click on atompars in the selection window and then on atompars mm ec dat This is and atomic parameter data set for carbon Choose a filter if you wish 19 Click Done to advance to the Processing options window 20 Enter a Title for Run at the top of the window 21 In the top left box enter 12 0 for the Impurity element isotopic mass and 2 0 for the Neutral hydrogen isotopic mass 22 In the lower left box for electron temperature enter Lower limit 1 0 Upper limit 100 0 No of temps 10 23 In the lower right box for electron density enter Lower limit 1 00e 10 Upper limit 1 00e 15 No of dens 11 24 Click Done to advance to the Output window 25 Enter 30 for the two digit year number Make sure there are no blanks The Passing file template changes accordingly It is editable 26 Select Text Output and Default File Name and click Done 27 Note the list of passing files which will be created is shown in an information widget Click OK to accept the list 28 Click on the Escape to Menu button to finish 29 Look at acd30 c pass Note that it is fully formed ADF11 unresolved type file 3 Example 1 Repeat ADAS405 but this time select the file iter test c Everything else is the same You will see a line selection choice now on the proce
99. oton density scan button to choose the range of plasma densities In the usual manner enter the following values into the table editor 1 0e13 1 0 2 0e13 2 0 3 0e13 3 0 4 0e13 4 0 5 0e13 5 0 Click Done to return to the processing window Enter the value 3 as the ndex for the reference densitv Now click on the electron proton temperature button and enter the following values ino the text editor 1 0e3 2 0e3 3 0e3 4 0e3 5 0e3 Click on the Done button to return to the processing widget Enter the value 3 as the Index for the reference temperature Click on the beam energy scan button and eneter the following values into the table editor 2 0e4 3 0e4 4 0e4 5 0e4 6 0e4 Click on the Done button to return to the processing widget Ernter the value 3 for the Index for the reference beam energy and 1 0e8 as the Beam density Now click on Done to advance to the Output window There are several possible outputs but our interest is in the contents of the first passing file The first passing file is of type ADF26 and contains the tabulated population structure and effective stopping coefficients as a function of plasma parameters It should be noted that the fourth passing file contains the stopping coefficients assembled ADAS EU Course 26 30 March 2012 39 according to format ADF21 The preferred route to obtaining the stopping coefficients is via ADAS312 23 Click on the First passing file button and enter a filename
100. oton temperature button and enter the following values ino the text editor 1 0e3 2 0e3 3 0e3 4 0e3 5 0e3 Click on the Done button to return to the processing widget Enter the value 3 as the Index for the reference temperature Click on the beam energy scan button and eneter the following values into the table editor 2 0e4 3 0e4 4 0e4 5 0e4 6 0e4 Click on the Done button to return to the processing widget Ernter the value 3 for the Index for the reference beam energy and 1 0e8 as the Beam density Now click on Done to advance to the Output window There are several possible outputs but our interest is in the contents of the first passing file The first passing file is of type ADF26 and contains the tabulated population structure and effective stopping coefficients as a function of plasma parameters It should be noted that the fourth passing file contains the stopping coefficients assembled according to format ADF21 The preferred route to obtaining the stopping coefficients is via ADAS312 Click on the First passing file button and enter a filename Now click on Run now An Information widget appears After the calculation click on the Exit to Menu button to return to the ADAS3 series menu ADAS EU Course 26 30 March 2012 42 Callable ADAS Exercises March 2012 1 Aim The aim is to familiarise you with callable ADAS mainly in an IDL environment but also using Fortran Please feel free to expand any of
101. passes through A button table pops up Click on the buttons for the nuclei you wish to include for example Be4 C6 H1 and click Done Note the Stopping Ion List Click Done to advance to the Processing Options window Click on the Fit polynomial button then type 5 in the adjacent active editable box Now move to the Stopping ion fractions Click on the Edit Table button to activate Table Editor Enter 0 1 0 1 0 8 for Be C H respectively and click Done Now Select the co ordinate type for the output graph Click the Energy button for the first try Click on the Default Output Values button You may find a warning widget pops up If so click the Confirm button Click the button for Graphical output Finally click Done to see the graph Click Done to return to the Output options screen You may Exit to menu using the icon in this program ADAS 310 Test Case 1 2 Move to your directory lt uid gt adas pass Start ADAS and move to the ADAS3 series menu Select ADAS310 The Input window is considerably different from the usual Enter beam species details H for hydrogen and its isotopes and the atomic charge of the beam species There are two files to be selected the expansion file and the charge exchange file To select the expansion file click on the Central Data button the Data root to the data class ADF18 should appear in the window above Now select the data file bndlen_exp h0 dat To select the charge exchange file clic
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103. peratures Values button If a warning pop up appears click Confirm on it A set of density values appears in a pop up window Click on 1 000E 13 The temperature and density output values appear in the table Click on the Done button to proceed to the Output options window Click on the button for Graphical Output Select Post Script out put by clicking on it in the Select Device list window Click on the button for Enable Hard Copy Enter a File Name such as graph ps Remember to press return A warning widget appears if graph ps already exits If so click on Replace Click on the button for Text Output Type in paper txt this is the standard text output File Name On many Output windows there is a Default File Name button You can click on it to enter paper txt as the standard text output File Name Then click Done ADAS EU Course at RFX 26 30 March 2012 69 10 The graph appears in the next window Click on Print to send a copy of the graph to the graph ps file Click Done to return to the Output Options window Click on the Exit to Menu icon at the bottom left corner to restore the ADASS series menu Finally click on the Exit button on the sub menu and main menu windows to exit ADAS 11 s to see the files You may wish to list paper txt to see its format 3 Using the Table Editor widget 1 Repeat steps l 3 above Click on Edit Table on the processing screen Table Editor pops up 2 The values in italic font are vou
104. pop dat to read the populations Plot them using IDL 85 Quantity Description MQCD Molecular excitation CR coefficient MSCD Molecular ionization CR coefficient MACD Molecular recombination CR coefficient MXCD Molecular cross coupling through ionization CR coefficient PDCD Partial from a molecular specie dissociation CR coefficient PXDCD Partial from a molecular specie cross coupling through recombination dissociation CR coefficient PXSDCD Partial from a molecular specie double cross coupling through molecular recombination and atomic ionization dissociation CR coefficient DXCD Partial cross coupling through atomic ionisation dissociation CR coefficient scD Atomic ionization CR coefficient ACD Atomic recombination CR coefficient QCD Atomic excitation CR coefficient XCD Atomic cross coupling through ionization CR coefficient Table 1 Description of collisional radiative terms 86 Appendix E EFDA JET special meeting E 1 Meeting report ADAS EU Travel Report Location EFDA JET Facility Culham Laboratory UK Date 26 27 Apr 2012 ADAS EU staff Nigel Badnell Martin O Mullane Alessandra Giunta Hugh Summers Persons visiting Pavel Bogdanovitch Vilnius Pascal Quinet Mons Patrick Palmeri Mons EFDA JET staff Mathias Groth Sebastian Brezinsek Costanza Maggi Andv Meigs Kerrv Lawson Mike Stamp Pu
105. put options screen You can Exit to menu using the icon in this program 2 ADAS 407 Test Case 1 Move back to your pass directory lt uid gt adas pass Start ADAS407 2 code can operate in interactive or automatic mode On the Analysis Choice window select Interactive 3 The code works on the adf04 files for adjacent ionisation stages These adf04 files must have recognizable Eissner configuration format In practice this restricts you to copmm lt nucchg gt libraries 4 On the upper part of the Input screen select copmm t54 Isttxel0 dat If a copmm lt nucchg gt file is selcted then the adjacent ionised ion file is automatically selected in the lower part of the screen Otherwise you must make an explicit choice 5 On the upper left side of the Processing window click Selections You must choose the lowest level that is the ground state ADAS407 has another mode for which additional metastable choices are required 6 On the upper right side of the Processing window the same for the ionised ion 7 On the Parameter Form section select A for all items 8 On the Matching Temperature part select 2 420e 06 ADAS EU Course at RFX 26 30 March 2012 74 9 Click on the select ionising ion ground state just above the Selection button on the upper left side This sets transitions in the lower right sub window 10 You assign a bundle index to each transition in turn in the lower right editable box Return t
106. q uonpyu u duir JUUIIBPLULIN uoneunuassiq SIMILI Areyuounjdwoj SIMAN sa1njea 3 jenads SSTUH d0 S weag B upupxq E12 12110 sapads AAP H SIMIUL IYRUIDS Alev enpeq XTA 012105u09 7 puu 05194 seurse d uorsnj o uoneordde ma pue suone noe 20001 uo uepin5 svav na svav ZIOZ WIEW 08 97 ISINO SUTUTPAL NA SVAV IL moqy doin3 ul uolsn 10 a1njonajs SISAJEUV pue eyeq onwojy i naFa syvov EM asino 2102 N3 SVOV gt BAZ AqeH PAY Apeloig e1opay EJ sazon ISEJJAHEJ Apaysin son E 316009 B2 A dud ztozesunoo ne uoisny sepewwwf dnu W E gt djaH sjool sysewxoog AoH wa PI a gt ADAS EU R 13 DI03 uoq OZ T3 SI Keuinof ajGuis e Jo 1502 ay SJ9JOU au o 9SOJ9 Alan dois e seu UJIUM snq Jequinu au Aq panas jam SI JI Ng gaye pewsnpul snow uoue re e u payeooj si X4 Olziosuo Ajareunuojun Keme LUQOZ ISNI SI Bab f loH ING 12 I loH ayi Je HulAeys aq JJIM 5101 SYAY aui JO ISON 5 910 UMOJUMOP soud piw are yolym OU Ono19 ajo are sjajoy om sBulu A au ui dn 1 ULI am jeu os ajay ABS NOA yey am pue juespojd ajou 51 sae ayi enpeq Aqieau ui yo A1olgioqp i au q asojo Jeune uonepoululo22e lou SI aiay 1 Ot TZ 1e SI epuns uo snq JSEJ aui pue mou Jad 89U0 uni sasng uodire ayi 1 3s p OA
107. q pajpuey aq jim seuenb uoneziuebio eiauah pue souapuodsayon v32 anbiwoyy 91b18U3 B jeuessiululo l Jo yoddns eui ui apAjouens yo Ailsi Alun eu Aq paziuebio si esinoo 13 S vOv SUL sarimbug Seale s ul uo JOIN pue juedioned auj 10 ajqejrene SJOJS euin aney JIM sino ay 1 oldo sjuediomed v yum s niliqede Syqy Jo uawu je UI djay o paynuap aq Wu 2100 nads sjuedionied yore o Dons souauadxe SYOY ui uosiad e yey peuue d si jj Som pue sjuedionied lle abebua ili uolssn sip AN MOJJOJ ay 19U SIU esueuiuns pue BONPOJUI o juediomed au 10 a qe rene aq JJIM Seinuiui pe punoiy ISAJBJUI jo Pale sjuedionied uoee o PAJEJIPAP uoissas e aq JJIM aay kep uoe3 sejdurexe payiom pue S US S191 X SUOISSAS 21 01 uo spueu aie 3 94 saina pewoj o uonippe uj saloads 1e noejoui jo Huljjapow uonejndod au SVQV Jo 1 mau e sanponu JJIM am esinoo siu 10 euiau e sey esinoo buiuren 13 50 u e3 A asino ZTOZ MI SVOV AJU3JUO Sau AqeH pay UJ Apaloid 22 sazon aseojoy s ApansiA 15ow EI V 6009 E dud ea zi0zesunoo ne uoisnj sepe MW d3U ds m s gt d eH sjoor syewyoog ASIH MA PI a 49 C 2 Agenda Agenda ADAS EU course 2012 CEA Cadarache Wednesday 26 September 14 00 14 30 Computer set up 14 30 15 00 Introduction 15 00 15 30 Interactive system Thursday 27 September 9 30 9 45 Computing instructions for
108. r input data Click in anv of these boxes to edit the number within it The workstation cut paste and copv kevs operate Press the return kev on the kevboard to record anv change This is the normal editing mode 3 The set of round and square buttons below the table are designed to help in some editing tasks You must be careful to remember the sequence of operations since it is different from that on personal computers Activate the appropriate button position the mouse text cursor or drag over required digits press the return kev on the kevboard to complete the sequence 4 The Default round button is the reset to normal editing mode The Delete button allows deletion of the value in a box leaving an emptv box the Remove button allows deletion of a value with the column then being pushed up the Insert button creates a new empty box pushing the column down These buttons stay active until you click Default 5 The Copy and Paste round buttons operate for the next immediate action only 6 Square buttons have a continuing effect until an alternative is pressed The Row_skip button causes a jump to the next editable box in a row when the return key on the keyboard is pressed Column_skip causes jumping to next box in a column Scroll up moves the whole window down Note that the window only shows ten values in a column but the whole table may be longer that this 7 Preferred Temperature units for working with may be chosen Changing units causes th
109. re only concerned with electron impact excitation data This is the default e exc in the Type of Plot The Type of e exc plot is selectable Note the usual Upsilon gamma and excitation rate coefficient but also the Burgess C plot ADAS EU Course at RFX 26 30 March 2012 71 4 5 4 6 4 7 Note the cursor is active for reading of values 4 9 At the top of the window select the file whose transitions youn wish to step through The code will attempt to match transitions from the other file to it which may nit be successful indeed the transition may not exist in the other files Note the tape recorder controls at the bottom The upper and lower indices of a particular transition may be entered in the editable boxes Then click Show We find it convenient to have the files open in an editor as we do the examination Print will send the displayed transition to a file via a pop up dialogue Be cautious of using the Print All button there may be a lot of electron impact excitation transitions 5 ADAS205 Test Case 3 5 5 6 IT 6 ADAS207 Test Case 6 1 6 2 6 3 6 4 6 5 6 6 6 7 6 8 Move to your sub directory Suid adas pass ADAS205 Click on Central Data Select the Be like oxygen case adas 8 cop98 8 Is o4 dat Click on the Default Temperatures button and Default Densities button Click on the Selections button for metastable states A pop up list of all the lev
110. rpose Design content of ADAS EU follow up sub contracts with Univ of Vilnius and Items Univ of Mons Hainaut Discuss progress of tungsten spectral modelling with EFDA JET team 1 First discussions 26 May a m were with Pavel to plan further calculations using his methods for ab initio structure and transition probabilities in the large scale multi configurational approach with virtual excitations and TROs for low and medium charge states of very heavy systems 2 Martin and Hugh wondered about the importance of the 5d 5f promotion in the W Wi iso nuclear set with open 5d valence shell Martin s simpler Cowan Born studies of total radiated power suggest that this transition array would be a main radiator yet there is no information on 5f levels in the NIST tables and it is excluded from the studies for ADAS EU by Pascal and Patrick 3 Nigel and Hugh conjectured on inclusion of the simple one electron promotion so that in the structure calculation there would be at most one electron in the 5f shell Pavel was concerned that the CI of 5d and 5f would need to be included although Nigel and Hugh were prepared to accept the cruder calculation at least to size up the problem 4 Pavel pointed out that multiple f shell occupancies were not at present included in his structure calculations but that Gaigalas had the capability to make this extension with him 5 It was felt to be feasible to extend the calculations with open 5d sh
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112. s assembled according to format ADF21 The preferred route to obtaining the stopping coefficients is via ADAS312 Click on the First passing file button and enter a filename Now click on Run now An Information widget appears After the calculation click on the Exit to Menu button to return to the ADAS3 series menu ADAS EU Course 26 30 March 2012 81 Callable ADAS Exercises March 2012 1 Aim The aim is to familiarise you with callable ADAS mainly in an IDL environment but also using Fortran Please feel free to expand any of the tasks or change them slightly to deal with your favourite ion The sub tasks should be considered optional and are often more difficult marked with s so don t spend too much time on them unless they are of particular interest getting the main tasks done is more important 2 Tasks 1 Use run_adas208 to explore the population structure of boron like neon e Find the approximate density where the systems switches from coronal to CR and from CR to LTE e Produce a PEC file for the system e 2 Use read adf11 to read ionisation and recombination coefficients for carbon e Plot the temperature where the ionisation and recombination rates are equal as a function of ion charge SS 3 Use run_adas405 to generate an equilibrium ionisation balance for carbon e Compare the temperature of peak abundance as a function of ion charge with the points where the rates are equal s
113. s g e8J0y H IN uolsn Joj uonenpeae geq MANL U9ssaID n suoN n UNANV ddd 0 110 THAN SAIN YILI seuoje1oqej pejeioossy WOJEINZ IF ye SJOJLJOQBJJOD Auew pue spAjoyrens JO Ays an un SOISAUq JO juouedeq ejunic y siowwns q H lleupeg H N SUEJINIA O Ue EJEP pue Sjapoui sSvav ui Bunepouiuio22y 0 epApwens JOAJISISALN yn se sepe mmm 2L02 10qweIdaeg g eaJ0y Y4N uoisn Joj UOIENJBA9 geq ONI YOO eunjnj SYAY jeap ue pinom yeu lt UOHPULU SSID lqE1S pue Ajurejisogun peynuenb uonnqumne Aijenb eje eyep jo 1es njesn pue eAgejuouine ue ainsua 0 MOH lt Guijjepou 10 ejep peAuep pue jejuawepuny PaJo S SI ejep Jeym lt SOAJOSWOU q Juam yns jou ale sennuenb jejnoejou pue omuoje and sapos uo siseydwe y Aum lt SELUSEJA Joy JO buijpapou pue sisoubeip Jamod pajeipei pue oidooso4j2eds 10 paubisap ejep pue sapos Jo jas y ESVGV JO adoos au si JEUM lt suonsanb jo 195 e ye JO auino yn se sepe mmm Z10Z 19quwo10das g eaJ0y Y4N uoisny Joj uonenpeae geq SUOHO S SSOJ9 JENPIAIPUI JBUOIJIPEJ ay ueu 194121 sjasejep SVQV se peuunjai si ejep eui 110 y BIA SI ejep SIY jo Alan lap SUL lt aJQEJIBAB ejep ay eyew o y3v Aq pue pauoidueyo sem Svav NadO lt SJequieuu asaul jo 5 e Aq SI so9ueulae
114. s with electrons and ions and can be excited ionized or dissociated The continuitv equations for the molecular metastables of a diatomic homonuclear molecule can be written as N NS N ENS N C GN HC No tN rS NT 1 where C are the collisional terms which include all excitation and de excitation as well as spontaneous and radiative processes from level y to level x and N are the level populations Greek subscript are used for metastable states and latin subscript for ordinary sates The diagonal C coefficients include all the losses due to recombination ionization dissociation and excitation from level x Sx are the ionization rate coefficients from the molecular species with one more electron and ry are the recombination coefficients from the parent ionized molecule T correspond to the source terms for this molecular species The continuity equation for the dissociation products e g atoms and ions is then at gt N DAN 2 N DIN ANS VN e uu CAN a N N rg N TO 2 Here terms D correspond to dissociative rate coefficients and a summation must be performed over all the molecules which can dissociate from metastables and ordinary states into the dissociated species The superscript A refers to atomic population Assuming quasi statical equilibrium it is possible to solve for the ordinary states in function of the metastables 6 obtaining the effective coefficients dN an MSCD N N
115. ssing options window Select one of these On the Output options window you should look at the other graphs 5 Example 2 ADAS405 has a very wide scope Feel free to try it You will probably need to look at the manual to appreciate its full capabilities and the range of data which it can access ADAS EU Course at RFX 26 30 March 2012 36 Tutorial session 4 examples 1 ADF01 and ADF12 1 Explore the ADAS database for these formats Note that the specification is in the ADAS User manual appxa 01 and appxa 12 ADAS301 Test Case 2 Move to your sub directory lt uid gt adas pass Start ADAS301 3 Click on Central Data and select qgcx h0 gcx h0 old n7 dat 4 Click the Browse comments button to see the list of transitions present in the file qex hO gex h0_old n7 dat Move onto ADAS301 Processing window 5 Select Fit polynomial at the 5 level Click on the n 8 n 7 transition in the transition list window You will need to use the scroll bar on the right 6 Click on Select Velocities Energies for Output File button 7 Now put in default values in the Table Note the units in use It is preferred to units of eV amu You need to edit the table to change the units 8 Click on the Select Quantum Numbers for Processing button Select the 7f shell Note that you can select total and partial cross sections see the key to the right 9 Click on the Done button to proceed to the Output options window 10
116. t account for the nuclear movements and the limited size of the molecular core The influence of this overestimation in the bound free processes from the non metastable excited states in the CR model is under study Results First results of the CR model described above for the Hydrogen molecule system are presented here We have assumed a constant source term of the lowest vibrational state in the ground electronic state for Hydrogen molecule Plasma conditions similar to recent experiments 2 have been chosen as a starting point A set of 27 electronic states for the H molecule and 3 for the H ion have been considered Of these 16 are singlets para hydrogen states and 11 triplets ortho hydrogen The dissociative states are the D X of H and 2po and 2 of Ha the latter two absorb all the excitation from the ionic ground state giving dissociation Dissociative recombination is assumed at this stage to produce atoms in its ground state Spontaneous decav to the dissociative triplet b is considered and is one of the mechanism which makes dissociation dependent on density 3 Ionization from is considered as dissociative giving two protons and two electrons as dissociation products No charge exchange or heavv particle impact processes have been considered at this stage This particular problem will be studied in the future The sum of the effective coefficients for ionization from all vibronic states from the H ground ele
117. t analyses the collisional matrix and fill the gaps where it is possible To do so impact parameter IP approximation with a cut off at close radius 8 is used for the excitation data by means of the ADAS routine EIQIP 7 For excitation and ionization data the ECIP approximation 9 which uses binary encounters at close range collisions with IP at long range is available ADAS903 can utilize the Franck Condon factors to create data for the two resolutions considered 1 Electronic resolution where the vibronic transitions are summed over the electronic levels for the ordinary states Due to the absence of a permanent dipole moment in the homonuclear diatomic molecules vibronic levels of the metastables are considered as metastables themselves and transitions between them are forbidden 2 Full vibronic resolution where all the vibronic levels are kept for the calculations Here Franck Condon factors are used to split the total cross sections into vibronic states The results of ADAS903 are written into the format mdf04 for electron impact and mdf14 for ion impact These formats keep the adequate resolution electronic or vibrational of their precursors They also make the input for the molecular CR model performed by the routine ADAS904 which calculates the effective coefficients and outputs the populations of the different metastables The coefficients are archived in the mdf11 format files ADAS904 have into account the pre dissociation and
118. ter contour pass in the File Name editable window Then click Done The graph pops up There are several graphs to look at Finally click Done to restore the Output options window Click the Exit to Menu icon to finish up Finally click on the Exit button on the sub menu and main menu windows to exit ADAS Note the files created includes the collection file contour pass You may wish look at its format Move to your sub directory lt uid gt adas pass Make sure you have a contour pass file there Start ADAS and go to the ADAS2 series sub menu Click with the mouse on the seventh button in adas2 series for ADAS207 The Input window for ADAS207 pops up Click on User Data the data root to you pass sub directory should appear in the window alongside Click on contour pass in the file list window It appears in the selection window Click Done and the ADAS207 Processing window appears Click on the Selections button for the 1st composite line assembly The window with the full list of lines pops up Click on the buttons alongside the lines you wish for the numerator of the line ratio These are on off buttons Note a button is darkened when activated and the program remembers the choice you made if you have had a previous run Select transition 2 for the test Click the Done button Click on the Selections button for the 2nd composite line assembly The window with the full list of lines pops up Click on the buttons alongside the lines you wis
119. this code uses the configuration information and quantum numbers to match transitions between different files If you use a non standard that is not ADAS Standard or Eissner form the code will fail to match it is quite sensitive For this test we shall compare a high grade assessed boron like ion of oxygen adas 8 cop98 8 Is o3 dat with a much older impact parameter cross section based data set copss b copss b ss o3l dat built on a SUPERSTRUCTURE calculation Select the first data set in the in the upper part of the Input window The second data set is selected in the lower part and uses a more standard Unix file selection so that files can be tested during construction when not located in your ADAS space You can choose a third file if you wish e g the Born baseline copmm 8 Is o3 dat There is only a further display screen which incorporates selection and controls At this stage we are only concerned with electron impact excitation data This is the default e exc in the Type of Plot The Type of e exc plot is selectable Note the usual Upsilon gamma and excitation rate coefficient but also the Burgess C plot ADAS EU Course at RFX 26 30 March 2012 32 4 5 4 6 4 7 Note the cursor is active for reading of values 4 9 At the top of the window select the file whose transitions youn wish to step through The code will attempt to match transitions from the other file to it which may nit be successful indeed t
120. with the total line power for C34 in coronal equilibrium conditions SSS Using the fortran routine r 8ah write a small Fortran program which prints out the A value of the 8p 3s transition in hydrogen e Extend the program to print out the A value of the whole n 8ton 3 transition Z e Do the same in IDL Combine run_adas405 and read_adf15 to produce an emission profile over the device fusion machine star blob of tin of your choosing e Integrate over the data to simulate a spectrometer A e Automatically produce an adaptive grid of points where the emission is highest 77 Use run adas416 to produce partitioned data using the file home ITER omullam ADAS_course partition_example dat e Modify the partition and explore how the various ions move in and out of being bundled A Use read 212 to read effective charge exchange emission coefficients for the n 8 gt n 7 transition of CVI e Write a program which can turn a fitted line area into a carbon concentration given a known beam energy beam density and plasma parameters SS Use read adf22 to read beam populations BMP for a hydrogen beam look at the relative populations of n 2 to n 1 as a function of energy e Combine these populations with two ADFI2 files via read adf12 and explore the variation with energy compare it with just assuming n 1 population 4 A Read beam stopping coefficients for a neutral beam passing through a hydrog
121. x 25 Now move to the Stopping ion fractions Click on the Edit Table button to activate Table Editor Enter 0 1 0 1 0 8 for Be C H respectively and click Done 26 Now Select the co ordinate type for the output graph Click the Energy button for the first try 27 Click on the Default Output Values button You may find a warning widget pops up If so click the Confirm button 28 Click the button for Graphical output Finally click Done to see the graph 29 Click Done to return to the Output options screen You may Exit to menu using the icon in this program ADAS 310 Test Case 13 Move to your directory lt uid gt adas pass Start ADAS and move to the ADAS3 series menu Select ADAS310 14 The Input window is considerably different from the usual Enter beam species details H for hydrogen and its isotopes and the atomic charge of the beam species 15 There are two files to be selected the expansion file and the charge exchange file To select the expansion file click on the Central Data button the Data root to the data class ADF18 should appear in the window above Now select the data file bndlen_exp h0 dat ADAS EU Course 26 30 March 2012 38 20 21 22 To select the charge exchange file click on Central Data the Data root to data class ADFOI should appear in the window Select gcx h0 Now select the data file qcx h0 e2ptihl dat Click on the Done button to advance to the Proessing options
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123. you have already used ADAS your defaults directory files may be out of date This will cause codes to crash so it may be best to delete all the files in the defaults directory and start afresh Move to the central adas file space cd home adas Look at the directories at this level is You will see the directory doc Move into it and look again cd docs ls You should see the various sub directories including bulletin and manual Move into the bulletins and look again cd bulletin Is You will see all the bulletins including the one sep25_09 pdf Bring up a acrobat viewer for pdf files acroread amp to look at the sep25_09 pdf bulletin Bug fix releases and the associated bulletin comes out annually or occasionally more frequently New code releases are separate and occur when ready Return to the Terminal window move into the docs subdirectory manual and list the files appxa files describe the ADAS data and the others describe the ADAS codes Use he acrobat reader to look at chap5 03 pdf and at appxa 15 pdf Move to the directory work projects adas Notice the fortran and idl subdirectories Move into fortran and list and then down into adas5xx look again Finally move down into adas501 for a final look You are now at the FORTRAN codes themselves Note hat on your own site the source fortran may not be accessible to the ordinary user Now move to the directory work projects adas adas and list This is the database

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