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T16 Desktop Software Manual

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1. Tube 2 10 Tube 10 Tube 3 11 Tube 11 Remove Tubes 1 8 Remove Tubes 16 Tube 4 12 Tube 12 5 Tube5 13 Tube 13 Tube 6 14 Tube 14 Test Workflow Tube 7 15 Tube 15 Drag items from the toolbox to construct a test workflow Tube 8 16 Tube 16 Read Read Tubes for 600 seconds Workflow Toolbox Pause Waits at Temperature Lid Action Pauses Workflow Lid Close Resumes Read Reads Assay Lever Test Parameters include e Selecting tubes to use read in a test It can be any combination of 1 16 tubes e Selecting channels to read e g FAM HEX and ROX e Selecting LED Settings e Setting Chanel LED levels as a percent e Setting test duration e Selecting a Decision algorithm decision algorithms re created in the Algorithms Tab e Setting test temperature e Building up workflow modules up to 5 can be set The test workflow is set up using a drag and drop input method Each workflow step is configurable o Pause Set wait time 10 1200 seconds 20 minutes max when T16 ISO device is at temperature User Interface Message text required to save test type profile o Read Set read time 50 3600 seconds 60 minutes max o Lid Action Test proceeds when lid close action is recorded set timeout 15 1200 seconds User Interface Message text required to save test type profile ang TwistDx Limited Minerva Building Babraham Research Campus Babrahan Cambridge CB22 3AT UK Te
2. Quick Start Guide T16 ISO DESKTOP SOFTWARE TwistDx Limited Minerva Building Babraham Research Campus Babrahan Cambridge CB22 3AT UK Tel 44 0 1223 496700 Email techsupport twistdx co uk www twistdx co uk DOCUMENT CONTROL DETAILS QSG Quick Start Guide Desktop Software Axxin T16 ISO Platform CUSTOMER CONTACT DOCUMENT APPROVAL REVISION HISTORY REVISION DESCRIPTION AUTHOR DATE 1 First Release 02 December 2013 General Release CONTENTS Ee RE a E 3 2 116 ISO Desktop amp Customisation tool Installation 0 0 0 0 ccccccccc sees eeeceeeeeeeeee esse eeeeeeeae cess eeseeesaeeseeeeaeeeseeeseeeas 4 Mem Le 5 4 Connect Desktop Application Tolnstrument cece eeeee eee eeceeeeee cess esse eeseeeeeeeseeeseeeseeeeseeesaeeeseeeseeesaeeaeeeaes 6 4 1 Instrument ee 6 FCE CYTO D ae E E A E E 7 6 COMMEC Ebbe 8 7 Creating a Test Type a sirears aguas act sesuteerarnasannecdanereteseenti vetareavieccastvnacncnaavienrsemvnsrcsamrorannimeteateactamtociesmnyeactestiustavaceaseiew 9 FUMIE A WC EE 10 giele ed Lei E Le LCE 10 TwistDx Limited Minerva Building Babraham Research Campus Babrahan Cambridge CB22 3AT UK Tel 44 0 1223 496700 Email techsupport twistdx co uk www twistdx co uk 1 SETUP GUIDE Inspect the 116 ISO device packaging for any obvious signs of damage during shipping prior to opening A Unpack the entire contents of the package and inspect all items for damage Place the T16 ISO de
3. 172 16 0 85 Figure 6 Connection to an instrument with Networking F Network connection successful TIE ISO Instrument a 172 16 0 176 Disconnect eae CH Figure 7 Instrument connectivity status 8 of 10 TwistDx Limited Minerva Building Babraham Research Campus Babrahan Cambridge CB22 3AT UK Tel 44 0 1223 496700 Email techsupport twistdx co uk www twistdx co uk 7 CREATING A TEST TYPE The Test setup is conducted under the Test Types tab where test parameters can be set It enables a user to add and remove a test profile or to edit an existing test profile A user can view and clone a test profile User can clone a profile but must enter a new unique name for the new profile T16 ISO Desktop Application Test Types Algorithms Instrument Support T16 ISO Instrument 172 16 0 88 Hx e e Save New Delete Disconnect Connected 16Tube 10mins gt Profile Name Temperature Selection Channel Selection STube 3mi Enter a name for the test profile Select the Test Temperature Select available channel types and associated LED levels ube 3min 16Tube 10mi 56 05 C dl FAM 17 0 MultipleActionsDemo z ShortRead Result Algorithm Selection W HEX 30 0 55 Select an Algorithm Decision object from the list ROX 70 Demo Aa X Tube Selection Tube Labels Select desired tubes for test by clicking on the tube image or buttons below Label tubes with user defined names 4 Tube 1 9 Tube9
4. Default Axxin T16 Customisation Profile file is included in Installer Folder Customization Profile Please select the supplied customization file Browse Skip Continue e The T16 ISO Desktop application will be found in the Start Menu gt All Programs gt Axxin gt T16 ISO Desktop MENU STRUCTURE KMA HOME OPEN SAVE AS ABOUT LOCATE IMPORT CONNECT CREATE INSTRUMENT ALGORITHM INFO PRINT CREATE TEST TYPE SES Epes EDIT TEST SELF TEST EAB ALGORITHM TYPE PRINT PARK OPTICS USER EXPORT CLONE CLONE SET TEMP MANUAL NORMALISE TEMP 5 of 10 TwistDx Limited Minerva Building Babraham Research Campus Babrahan Cambridge CB22 3AT UK Tel 44 0 1223 496700 Email techsupport twistdx co uk www twistdx co uk 4 CONNECT DESKTOP APPLICATION TO INSTRUMENT After installation open the T16 ISO Desktop application Select the connect button and view a list of detected Axxin Instruments connected over the network The T16 ISO Desktop application will automatically find and display all supported Axxin instruments The connection between the Axxin instrument and computer is established by USB or Ethernet network over TCP IP protocol A7 T16 ISO Desktop Application ajg Test Types Algorithms Instrument Support Open Connect Not Connected Not Connected Connect to an Instrument with USB No Instrument Detected Connect to an Instrument with Network
5. AM Instrument ID C9A4EA13 Filename 16tube_FAM_HEX_eg0 json Tube nares Tube 1 abet 4000 2000 fi 1 7 55 00 120 240 360 480 600 Tube 5 abc 4000 2000 SS 04 7 55 00 120 240 360 480 600 Tube 9 abc9 4000 2000 lt i D 7 56 00 120 240 360 480 600 Tube 13 abc1 4000 2000 SE Sege D 7 56 00 120 240 360 480 600 Instrument Support f Print Export 4000 2000 on n 7 55 00 120 240 360 480 600 Tube 6 abc 4000 2000 ee D 7 56 00 120 240 360 480 600 Tube 10 abc10 4000 2000 Te D 7 55 00 120 240 360 480 600 4000 2000 ewe D 7 55 00 120 240 360 480 600 Test Completed Tube 3 abc3 4000 2000 0 7 55 00 120 240 360 490 600 Tube 7 at 4000 2000 4 nE 7 55 00 120 240 360 480 600 Tube 11 abc11 4000 2000 e D 7 56 00 120 240 360 480 600 Tube 15 abc1 4000 2000 x D 7 56 00 120 240 360 480 600 0 r 7 55 00 120 240 360 480 600 Tube 8 at 4000 2000 0 7 55 00 120 240 360 480 600 Tube 12 abc12 4000 2000 e D 7 55 00 120 240 360 480 600 4000 2000 E 0 7 55 00 120 240 360 480 500 o EXPORTING A TEST PACKAGE SUPPORT TAB EXPORT di If a comprehensive list of Test Types and Decision Algorithms has been generated on an installed version of the T16 ISO Desktop Application then that list may be configured an
6. Connect Not Connected Connect to an Instrument with USB 1 Instrument Detected Connect Figure 3 Connect to an Instrument with USB F USB connection successful TIE I1S0 Instrument MF COM4 i Disconnect Active CH Figure A Instrument Connection Status 7 of 10 TwistDx Limited Minerva Building Babraham Research Campus Babrahan Cambridge CB22 3AT UK Tel 44 0 1223 496700 Email techsupport twistdx co uk www twistdx co uk 6 CONNECT VIA NETWORK DHCP Hub or Router Desktop Application T16 ISO Instrument Figure 5 Network Configuration Setup ETHERNET CABLE ETHERNET CABLE A Follow setup guide section 1 above connecting instrument to computer via Ethernet Cables and DHCP Hub or Router B Press the power button for one second to power up and start the instrument Confirm that splash screen is displayed at power up C Ensure Instrument is in Remote Mode and observe IP Address If IP address not shown refresh instrument network settings by navigating to network settings screen Settings gt Administrator Settings gt Network gt v On desktop software click Connect to view available units E Find Instrument on Networking list by matching IP address Click Locate to confirm choice instrument will emit a tone Click to connect to instrument TR Connect to an Instrument with USB No Instrument Detected Connect to an Instrument with Networking ti H0 H a3 23 de 03
7. Cambridge CB22 3AT UK Tel 44 0 1223 496700 Email techsupport twistdx co uk www twistdx co uk 2 T16 ISO DESKTOP amp CUSTOMISATION TOOL INSTALLATION Copy Installer Folder to USB Find the Installer folder in the T16 ISO Desktop Application file directory and copy to USB key Open Installation Folder on USB on Laptop Installer Installer files Ensure the T16 ISO Desktop and Customisation Tool installers and the Axxin Default T16 Customisation Profile file are in the Installer folder The T16 ISO Desktop and Customisation Tool applications are bundled into an installer ee a compatible for Windows 7 Operating system The bundle is oun aa a Microsoft Compatible msi file that can be executed on Windows computers Install Bonjour Select icon from the Installer Folder The Bonjour service is a prerequisite to the Desktop application This needs to be installed once only and is also found in the installer directory Recommended Install Procedure e Run BonjourPSSetup exe e Give Permission for application to Run BonjourPSSetup e Follow prompts in the Bonjour Print Service Installer e Read and Accept License Agreement e Read the Bonjour Print Service Information e Run install process Customisation Tool Installer Select Icon from the Installer Folder This needs to be installed once only and is also found in the installer directory Recommended Install Procedure lso Installe
8. d exported for use in other installed version of the T16 ISO Desktop application or can be imported onto a T16 ISO device to operate in standalone mode 1 Select the test types from a e AT Save As wey A gt New folder list of Test types that you Kees Organize v New folder would like to export Select Test Types to Export to Continue 2 Select Export Bag Test Type example 3 3 Choose a directory to save the Test Types tar file Enter a file name Select Save _ Export A tar Export B tar a Hide Folders Filename Export B tar AE e D nodified Type 1 08 2012 1 25 Ph TAR Fil KB 1 08 2012 1 27 Ph AR Fil 30 KB Save as type T16 Test Types tar file tar Save Cancel 10 of 10
9. ing t16 00 04 43 93 91 39 172 16 0 222 Locate Connect t16 4 00 04 33 3e 36 e2 172 16 0 88 Connect t16 3 00 04 33 3e 65 ab 172 16 0 238 Locate Connect Figure 1 List of available instruments 4 1 Instrument Modes Stand alone mode allows the instrument to run independently with the use of its touch screen There is no need for a network or computer in this mode Remote Connection mode allows a computer with T16 ISO Desktop installed to control the instrument and obtain data from it To allow remote connection navigate to the Instrument GUI Remote Mode Screen Home gt Settings gt Remote Mode NOTE 1 Remote mode does not allow the user to operate T16 ISO instrument independently 6 of 10 TwistDx Limited Minerva Building Babraham Research Campus Babrahan Cambridge CB22 3AT UK Tel 44 0 1223 496700 Email techsupport twistdx co uk www twistdx co uk 5 CONNECT VIA USB USB CABLE Desktop Application T16 ISO Instrument Figure 2 USB Setup Configuration A Follow setup guide section 1 above connecting instrument to computer via USB cable B Press the power button for one second to power up and start the instrument Confirm that splash screen is displayed at power up C Ensure Instrument is in Remote Mode On desktop software click Connect to view available units Find instrument on USB list and connect ort axxin K i
10. l 44 0 1223 496700 Email techsupport twistdx co uk www twistdx co uk 8 RUNNING A TEST HOME TAB RUN gt To run a test select a previously created Test Type with associated decision algorithm from a drop down list and select OK The tube diagram on the screen will display in which locations tubes need to be inserted Enter a e User Name e The Lot ID of the test batch e Then enter the Sample ID for the tubes undergoing test 2e T16 ISO Desktop Application Home Test Types Algorithms Instrument Support kl E e Save As Stop Print Export Setting Temperature 0000 0000 OO User Name Example Lot ID 000000 4 ABCOO 2 ABCOI ple ID s o ABCOS 10 ABCOS 3 ABCO2 A ABCO 14 ABC10 42 ABC1 e ABCO4 e ABCOS 13 ABCI2 7 ABCO 14 ABC13 15 ABC14 Instrument Ready Set Temperature 56 0 C 8 ABCOT 16 ABC15 T16 ISO Desktop Application The T16 ISO will continue to heat up until the device is at temperature for testing The Start Workflow button located at the bottom of the screen will be disabled until the device is ready Close Lid The device lid is required to be closed to initiate the start of a test All Tubes Depending on the number of tubes under test the results will be displayed in either a 16 tube or an eight tube format Heater Temp 56 C Test Types Algorithms Test Profile 16Tube 10mins Algorithm DemoAlg1 Start Time 29 02 2012 7 55
11. r Custo e Run Iso Installer CustomisationTool_ vX X X X exe misationlool vi o SC 0 0 0 e If required give permission for application to Run e Follow prompts in the Setup Wizard e Select Installation folder location default location C Program Files Axxin Axxin T16 ISO Customisation Tool e Axxin suggests the application be made available for all users on the computer e Confirm installation process e Read and accept License Agreement e The Customisation Tool application will be found in the Start Menu gt All Programs gt Axxin gt T16 ISO Customisation Tool 4 of 10 TwistDx Limited Minerva Building Babraham Research Campus Babrahan Cambridge CB22 3AT UK Tel 44 0 1223 496700 Email techsupport twistdx co uk www twistdx co uk Desktop Application Installer Select Icon from the Installer Folder This needs to be installed once only and is also found in the installer directory Recommended Install Procedure 116 50 Desktop e Run 716 SO Desktop_installer_v1 5 0 2 exe _installer_v1 5 0 2 o e If required give permission for application to Run e Follow prompts in the Setup Wizard e Select Installation folder location default location C Program Files Axxin Axxin T16 ISO Desktop e Ain suggests the application be made available for all users on the computer e Confirm installation process e Read and accept License Agreement e In pop up window select Customisation Profile to apply
12. vice on a stable level bench in a clean office or lab type environment Unplug the power supply contents Configure the power supply for your region 4 Connect the 12V power supply to the unit _ Connect the power supply to mains power a M DHCP Hub or Router and Two Ethernet Cables An Ethernet cable is required to connect the T16 ISO device to a facility network for network printing and to sync to network date time settings You will require two network cables to interface with the router One to connect the T16 ISO device to the router and one to connect the laptop to the router The router shall need to be set up to connect to the network A USB key is used for export and import functions on the T16 ISO device The SanDisk Cruzer Blade brand flash memory key formatted for FAT32 with only 1 partition is the suggest USB key device for use A mini USB Cable is used instead of a router to connect the instrument directly to the laptop PC Windows Laptop PC system requirements for T16 ISO Desktop Application Operating Windows 7 32 Bit System Use Windows Update to make sure you have the latest Service Pack installed for your computer Memory Minimum 1GB RAM Processor Minimum Intel Core i3 Processor Peripherals Ethernet Connection USB Port Printer Network printers over Wi Fi or Ethernet Requirements USB printer 3 of 10 TwistDx Limited Minerva Building Babraham Research Campus Babrahan

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