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MakeJmlrBookGUI User Manual Version 0.9.2b

1. Directory home nlct programming java jmlr src tests error in pape darce11a tex Figure 24 One of the imported papers beer 1a has an error in it 9 1 EXAMPLES OF COMMON PROBLEMS 31 makejmlrbookgui oldjmlr sample File Build Tools Settings Help oldjmlr sample Imported Paper smithlla 4 preface Xbeerlla 4 doella 3 Directory home nict programming java jmlr src tests oldjmlr samp D File winterlla Name Author s J Smith Tag smith Label smith11a smith11a smithila tex Jmlr cls 4 53 5010 3 22 version Location home nict programming java jmlr src tests oldjmlr samp Pages 15 20 i This document is using an older version of jmlr cls than the book 3 Remove the old version and rerun View Log Last Modified 28 Tan 2015 10 52 17 View BibTeX Log Last Modified 29 Jan 2015 10 52 17 View PDF Last Modified 29 Jan 2015 10 52 17 Edit Source Last Modified 02 Mar 2013 18 13 53 Imported Paper winterlla Label winter11a winterila Directory home nict programming java jmlr src tests oldjmlr samp File winter11a tex Name Figure 25 One of the imported papers smith11a is using an different version of jmlr cls from the rest of the book 9 1 EXAMPLES OF COMMON PROBLEMS 22 makejmlrbookqui problemsty sample File Build Tools Settings Help C3 problemsty d Imported Paper paper 5 preface paperi Label paper1 pape
2. Part 1 Fundamentals and Theo part 2 applicatons______ Import tex File ALR OriginalFiles Doejones main tex al lee Is areprint of aJMLR W amp CP article Original page range 32 E 0 Import tex File MLR OriginalFiles Smith article tex hi Is a reprint of a JMLR W amp CP article Original page range 55 4 Appendices Import tex File nalFiles WFJ winterFinchleyJones tex dh W Clis a reprint of a JMLR W amp CP article Original page range Figure 17 CiML All Import Articles Specified 19 4 CREATING A NEW BOOK _ New Setup tr T Part 1 Fundamentals and Theo Import tex File nalFiles MaryJanedeBeer articlae tex Import tex File je WorkshopOnSomethingArticle tex Part 2 Ap Import tex File MLR OriginalFiles DoeJones main tex Import tex File MLR OriginalFiles Smith article tex Import tex File nalFiles WFJ WinterFinchleyJones tex Appendices Figure 18 JMLR All Import Articles Specified 20 4 CREATING A NEW BOOK 2 so the default directory name is Volume42 The path this directory resides in is specified in the right hand field You can change it using the file selector Note that the book directory can t already exist This is a precautionary mea sure to ensure you don t accidentally overwrite the original files in case they are still needed LJ New Book Setup a Book Directory Volume42 lin fhome nict Documents
3. 2014 October v o Optional Norwich United Kngdom sl Optional PO a Optional i O O Optional Editor 1 Name Editor 2 Name Editor 3 Name Ann Editor ohn Smith oe Bloggs Figure 6 Sample JMLR Title Information m New Book Setup a Does the book have a preface 2 No Preface Yes the book should have a preface Create New File O preface tex source file aaa Figure 7 JMLR Front Matter Setup 4 CREATING A NEW BOOK 12 LJ New Book Setup um xj Does the book have a preface O No Preface Yes the book should have a preface Create New File O Preface tex source file E Does the book have a foreword No Foreword Yes the book should have a foreword Figure 8 CIML Front Matter Setup Click on the browse button to open the file selector If the preface hasn t been written yet select the Create New File button to create a new file If you have specified a CIML book you can do likewise for the foreword When you are ready click on Next to move to the next screen shown in Fig ure 9 All options are available for CIML books One of the options is unavailable for JMLR books If the articles should be grouped into parts for example Part 1 Fundamen tals and Theory and Part 2 Applications then select Yes but only in the table of contents or CIML only Yes in the main matter and in the TOC If the book should also have articles
4. Fundamentals and Theory Parsing home nlct Documents JMLR OriginalFiles MaryJanedeBeer article tex Writing home nlct Documents Volume42 beer14a beer14a tex File article tex Line 16 Warning redefining accent command c can have unwanted side e File article tex Line 17 Warning gdet detected Global command re detinitions within an adversely affect the rest of the book Please check that it s safe to re define the command e sn a ta x T celneor om Bb Caer en cS LAL bp f 1r1omnmalti AN mi l AAAren ares none n oamertnrer rricle EJ winterlla jmIrbook sample tex File Name imlrbook sample tex Files of Type LaTeX Files Figure 22 Opening a JMLR Book 6 THE BUILD MENU 24 6 The Build Menu Different formats of the book can be created using the Build menu which becomes enabled once you have loaded a book Discrepancies in the page numbering can occur if the book uses a different set of fonts to the included articles If you want the book to use a particular set of fonts create a file called bookfonts tex with the commands to load the font packages and add it the book s main directory MakeJmlrBookGUI will check the main tex file for the occurrence of input bookfonts and if found will input that file when building the individual papers Note that when building the articles this inputs bookfonts so the articles must be in immediate subdirectories of the main book d
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6. New Book Setup s ba Main Matter Clis a reprint of a JMLR W amp CP article Original page range Figure 11 CIML Import Articles No Parts 14 4 CREATING A NEW BOOK New Book Setup s 7 Part 1 Enter Part Title Here Import tex File da S Figure 12 JMLR Import Articles Parts 15 4 CREATING A NEW BOOK New Book Setup 7 m Part 1 Enter Part Title Here ht a Import tex File eee E Clis a reprint of a JMLR W amp CP article Original page range Add Part Figure 13 CIML Import Articles Parts New Book Setup El Part 1 Enter Part Title Here ty Import tex File oooO O 8 Sf Appendices Figure 14 JMLR Import Articles Parts and Appendices 16 4 CREATING A NEW BOOK 17 In the import file panel use the file selector to select the article s tex file If the author has supplied multiple tex files you need to make sure you only select the file containing the NGocumentclass command For example in Figure 15 I ve selected the beer11a tex file This file isn t a reprint per haps it s an introductory article for the CiML book so I ve left the reprint box unchecked The JMLR version of this panel which doesn t have the reprint op tion is shown in Figure 16 l New Book Setup oe x Part 1 Fundamentals and Theon Import tex File nalFilaes MaryJanedeBeer articla tex Is a reprint of a JMLR W amp CP article Or
7. Path to BibTeX The path to the BibTeX executable is required to compile bibliographies supplied with BibTeX databases Path to htlatex The path to ht Latex is required for JMLR Workshop and Conference Proceedings The htlatex application is part of tex4ht If you are only editing CIML books you may leave this field empty Path to GhostScript The path to ghostscript is required when build ing the print version of the book Path to kpsewhich The path to kpsewhich is required to located files in your TEX distribution Viewers at least jmlr version 1 17 amp APPLICATION SETTINGS 28 You need to set paths in order to view or edit files when following links in the book tab or by double clicking on files in the Book File List Tab Path to PDF Viewer The path to a PDF viewer is required if you want to click on any of the PDF links in the main panel Path to Text Editor The path to a text editor 1s required if you want to click on any of the links to source code or log files The text editor may be a general purpose text editor such as gedit or it can be a TEX IATEX front end such as TeXWorks Since TeXWorks is cross platform MakeJmlrBookGUI will default to that if the TeX Works ex ecutable is found on the system path Path to HTML Viewer The path to an HTML viewer is required for view ing HTML files This includes viewing files created with Build HTML and following links to the JMLR FAQ Path to Image Viewer The path to a
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10. MLR Book Fonts usepackage mathptmx usepackage cmap Figure 19 New Book Directory When you are ready click on the Next button This will start the new book creation process Recall from earlier that the winterlla example had a custom package newstuff sty provided by the author Since this 1s likely to cause a problem an error message is shown Figure 20 This identifies the problem file and the line number where the usepackage command occurred There s a possibility that the package may actually be available on the Comprehensive TeX Archive Network CTAN but isn t installed on your computer In which case you re provided with a URL that you can copy and paste into your web browser to check If it turns out that the package is available on CTAN you will need The fact that mystuff sty is present in the article s directory doesn t mean that it s the author s file as authors often copy all the packages they use into their article s directory 5 LOADING A BOOK 22 to install it and then edit the article s new tex file to uncomment the relevant Nusepackage command and you will also need to edit the book s tex file to add it to the list of required packages Completed with one or more errors fhome nict Documents JMLR OriginalFiles winterl 1 a wi nterlla tex Line 4 can t find package mystuff in your TeX distribution Try http ctan org search phrasezmrystuff Figure 20 Error Message Once you dismiss thi
11. The characters will be highlighted in bold red to make them stand out 8 Application Settings Application settings can be modified using the Settings Edit menu item which will open the Properties dialog box This has five tabs Book 8 APPLICATION SETTINGS 26 Properties x Applications Viewers General Applications Viewers Startup Directory Startup Directory aximum process time sH Minutes Enable logging ogging file home nlct makejmlrbook makejmlrbook log estart required for logging option to take effect E rror Details link Icon only Text only Icon and Text a b _ Conform to publisher requirements he logo on the index page of a JMLR proceedings can be hyperlinked to webpage If you want this facility enter the URL in the box below Properties Properties Applications Viewers General Applications Viewers General Book Startup Directory Book ath to LaTex calftexlive default bink86_64 linux pdflatex e a ath to PDF Viewer usr bin okular ath to BibTeX localitexlive default bin x86_64 linux bibtex ath to Text Editor usr bin texworks ath to GhostScript fustibinigs ath to HTML Viewer usrbinfirefox ath to kpsewhich l texlive default bin x86_64 linux kpsewhich psewhich ath to Image Viewer c d Properties M Maximum process time s Minutes Enable logging Logging file home nlct makejmlrbook makejmlrbook
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13. current process use Tools Abort 7 1 Check Characters Outside the Range 0x20 0x7E Encoding problems can arise when different authors have used different input encodings For example one article may use latin and another may use utf8 Even more troublesome is where a single file contains a mixture of encodings This can happen if the co authors haven t agreed on an encoding or quite often entries in the bib file have been copied and pasted from different sources so that different bibliography entries use different encodings Sometimes you will get a message about missing or undefined characters but sometimes as in Example 6 in 9 Troubleshooting there will be no messages but the resulting PDF file will appear incorrect To help editors track down problem characters MakeJmlrBookGUI version 0 4 2b has introduced the Tools Character Check menu item Use this func tion to open a dialog box with a list of all the tex and bib files belonging to the book The files are arranged in hierarchical order If you select a directory ev erything inside that directory will also be selected so to select all files just click on the root node Once you have selected all the files you want to check click Okay and the application will check each file for characters outside the range 0x20 space to Ox7E tilde On completion a window will appear with the list of files with the line numbers where characters outside that range were detected
14. included as an appendix select Yes the book has appendices otherwise select No appendices When you are ready click on Next to move to the next screen If you have specified no parts and no appendices the screen will be as shown in Figure 10 for JMLR books or Figure 11 for CIML books If you have specified parts then the screen will be as shown in Figure 12 for JMLR books or Figure 13 for CIML books If you have specified appendices there will also be an appendix panel For example Figure 14 is for a IMLR book with parts and appendices For CiML books each import file panel has a check box which should be selected if the article was originally published in a JMLR workshop and confer ence proceedings If this box 1s checked you need to enter the start and end page numbers from the original JMLR article 4 CREATING A NEW BOOK 13 LJ New Book Setup at xi Ils the book divided into parts O No parts Yes but only in the table of contents O Yes in the main matter and in the TOC Does the book have appendices That is does the book have appendix chapters or articles collected into an appendix This question isn t about appendices within imported articles O No appendices Yes the book has appendices Figure 9 Book Parts and Appendices _ New Book Setup sti xj l Main Matter Import tex File Figure 10 JMLR Import Articles No Parts 4 CREATING A NEW BOOK
15. log Restart required for logging option to take effect Applications Error Details link Icon only Text only Icon and Text e Figure 23 Properties Dialog a book settings b startup settings c paths to build applications d paths to file viewers and text editor e general settings amp APPLICATION SETTINGS Zi If the Conform to publisher requirements checkbox 1s selected the appli cation will run checks for certain requirements such as checking that file names follow the JMLR convention Note that not all JMLR requirements are checked When you build the HTML files for JMLR workshop and conference pro ceedings the logo on the index page will be hyperlinked to the location specified in the URL field unless you use the optional argument to 10g0 in which case that will be used instead If this field 1s empty and the optional argument of logo 1s not present the logo will not have a hyperlink Startup Directory You can specify which directory MakeJmlrBookGUI should start up in This can be the current working directory the last directory used by the application or a specific directory Applications You need to set the paths to executables required by the build processes They are Path to LaTeX The path to the PDFIATEX executable is required Note that the jmlr and jmlrbook classes were optimised to use PDFIATEX You are likely to run into errors if you use IATEX with DVI output
16. tex File pretace tex start 1 End 1 Editor 1 Nicola Talbot i University of East Anglia Figure 30 One of the imported papers doella has loaded a different version of a package loaded by the main book file 9 2 ERROR MESSAGES 38 9 Suppose you have included articles in your book using importpaper 9 2 and all the paper ranges in the book pdf seem correct but when you look at the individual article PDFs there is a discrepancy in the page range Why is this Most likely it s because the article 1s using a different set of fonts to the book Perhaps the article is using the default Computer Modern but the book is using Times Courier and Helvetica This change in font size can occasionally be enough to shift the last page Since it s a bit inconvenient to have to edit every imported article to use the same set of fonts as the book MakeJmlrBookGUI checks the main book tex file for the line input bookfonts If found it will try to include this file when building the standalone articles See 6 The Build Menu The new book function creates a file calledbookfonts tex with the font packages specified in the setup dialog Error Messages Message Exception in thread main java lang UnsupportedClassVersionError Cause you are using a version of Java that 1s too old You need Java 7 which can be downloaded from http www oracle com technetwork java javase downloads Message P
17. 1 1 a smoth1 il but the file does not exist Please check the spelling in the argument of the relevant import command l View Log Last Modified 29 Jan 2015 11 35 48 View PDF Last Modified 29 Jan 2015 11 55 46 Edit Source Last Modified 28 Jan 2015 11 35 38 Preface Source misspelt import tex File preface tex start 1 Figure 28 One of the imported papers has been misspelt in the main book file 6 Imported paper darcella darcella tex has used utf8 encoding Vila usepackage ut f 8 inputenc but the main book document has used 1 atin1 encoding via usepackage latinl inputenc The imported article has specified the author name using a Unicode dia critic 9 1 EXAMPLES OF COMMON PROBLEMS 35 Ntitle D Arc Article An Article by Mary Jane d Arc author Name Mary Jane d Arc Email mjdb sample com addr University of No Where This appears correctly for the standalone article but in the book the sur name appears as d ArcA instead of d Arc Imported articles that use the inputenc package can switch the encoding using inputencoding In this example darcella darcella tex could have Nusepackage utf8 inputenc Wumputencodingiutt5 however this might corrupt the book s table of contents if the non ASCII characters appear in the headings or author names as in this case See 7 1 Check Characters Outside the Range 0x20 0x7E to help detect this type of problem T
18. MakeJmlrBookGUI User Manual Version 0 9 2b Nicola L C Talbot http www dickimaw books com 14 April 2015 Contents 1 Introduction 2 Installing the JMLR LaTeX Bundle 3 Main Window 4 Creating a New Book 5 Loading a Book 6 The Build Menu 6 1 Building the Main Book PDF 6 2 Building the Print Version 2 2004 6 3 Building Individual Papers 64 Building HTML Files clle 7 The Tools Menu 7 1 Check Characters Outside the Range Ox20 Ox7E 8 Application Settings 9 Troubleshooting 9 1 Examples of common problems 9 2 Error Messages aoaaa Acronyms Index 10 Licence 22 24 24 24 24 24 25 25 25 29 20 38 39 40 41 1 INTRODUCTION I 1 Introduction MakeJmlrBookGUI is a Java GUI provided to help editors build Journal of Ma chine Learning Research JMLR proceedings or books in the Challenges in Ma chine Learning CIML series This application is designed to only work with books using the IATEX jmlrbook class that import papers using the jmlr class See the jmlr documentation for further details on using those classes This manual as sumes that the user is familiar with using IATEX and the jmlr bundle Make sure you have an up to date version of the jmlr bundle installed In addition to this manual there are also some video tutorials available at http www dickimaw books com software makejmlrbookgu
19. OLUTELY NO WARRANTY for details type Ihis is free software and you are welcome to redistribute it Under Certain Conditions type show c for details The hypothetical commands show w and show c should show the apprc parts of the General Public License Of course your program s comme might be different for a GUI interface you would use an about box You should also get your employer if you work as a programmer or if any tO sign a Copyright disclaimer for the program 1f necessal For more information on this and how to apply and follow the GNU GPI lt http www gnu org licenses gt The GNU General Public License does not permit incorporating your g into proprietary programs Li lt your program sS a subroutine Library may consider it more useful to permit linking proprietary applicatior the library If this is what you want to do use the GNU Lesser Gene Public License instead of this License But first please read lt http www gnu org philosophy why not lgpl html gt
20. ame John Smith email 8 3 name John Smith email js sample com addr 1 3 comM addr University of No Where name dU 3 ersity of No Where name John Smith email LaTeX reported 16 errors This document doesn t seem to be using jmir cls check and rerun 8 This document has used obsolete package epsfig File name doesn t conform to JMLR naming conventions pattern used for check d d a z i Directory name doesn t conform to JMLR naming conventions a 4 wrongcls sa Imported Paper paper3 Label paper3 papers Directory home nlct programming java jmlr src tests wrongcls sample pag paper3 tex Tag Unknown Figure 27 One of the imported papers is not using the jmlr class 9 1 EXAMPLES OF COMMON PROBLEMS 34 importpaper smithlla smothlla This error shouldn t occur with the new book function makejmlrbookgui misspelt import File Build Tools Settings Help C misspelt img 5 preface misspelt import tex beer11a darcelli 3 doella Workshop on Something D winterll JMLR W amp CP Volume 42 Making JMLR Proceedings jmlrbook cls version 1 21 2014 11 10 Location home nlct texmf tex latex jmlr jmlrbook cls jmlr cls version 1 21 2014 11 10 Location home nict texmi tex latex jmlr jmir cls JMLR Volume 42 Your document has tried to import file 3 home nlct programming java jmlr src tests misspelt import smith
21. blic in Source code form and must require no special password or key for unpacking reading or copying 7 Additional Terms Additional permissions are terms that supplement the terms of thi License by making exceptions from one or more of its conditions Additional permissions that are applicable to the entire Program shal be treated as though they were included in this License to the exter that they are valid under applicable law If additional permissions apply only to part of the Program that part may be used separately under those permissions but the entire Program remains governed by this License without regard to the additional permissions When you convey a copy of a covered work you may at your option remove any additional permissions from that copy or from any part of Tis Additional permissions may be written to require their own removal in certain cases when you modify the work You may place additional permissions on material added by you to a covered work for which you have or can give appropriate copyright permission Notwithstanding any other provision of this License for material jy add to a covered work you may if authorized by the copyright holder that material supplement the terms of this License with terms d DLSclatming warranty Or Limiting comcabubrrty drtterenutly rom tI terms or sections L5 and L6 ot this License or 10 LICENCE 50 b Requiring preservation of specified reasonable legal notices
22. bogo 2 makejmlrbookgui 2 mktexlsr 4 newcommand pdflatex 7 renewcommand Settings menu Edit 25 siunitx 35 tex4ht 24 27 texhash 4 theorem 29 Tools menu Abort 25 Character Check 25 Fetch JMLR LaTeX Bundle 4 Refresh Files 6 Remove Aux 25 Nusepackage 21 22 xfrac 35 40 10 LICENCE 41 10 Licence GNU GENERAL PUBLIC LICENSE Version 3 29 June 2007 Copyright C 2007 Free Software Foundation inc lt httpx fsf 0097 gt Everyone is permitted to copy and distribute verbatim copies of this license document but changing it is not allowed Preamble The GNU General Public License is a free copyleft license for software and other kinds of works Ihe licenses for most software and other practical works are desigr to take away your freedom to share and change the works By contrast the GNU General Public License is intended to guarantee your freedom share and change all versions of a program to make sure it remains f Software for all its users We the Free Software Foundation use tr GNU General Public License for most of our software it applies also any other work released this way by its authors You can apply it tc VOUP Programs TOO When we speak of free software we are referring to freedom not price Our General Public Licenses are designed to make sure that yc have the freedom to distribute copies of free software and charge fc them if you wish that you receive s
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27. f the strict option is set any non conformance detected shown in purple See 9 Troubleshooting Warn ing messages are shown in navy Many of these messages have a further information icon that you can click on to open a message window with more detailed information and recommendations If you prefer to change this icon to the text Details or if you want both the icon and Details 4 CREATING A NEW BOOK 6 displayed then you can switch to these settings using the Properties dialog described in 8 Application Settings Book File List The book file list tab Figure 2 5 shows all TEX BibTeX and image files in the book directory and subdirectories You can double click on one of these files to view them You can refresh this list using Tools Refresh Files 4 Creating a New Book To create a new book first ensure that you have unpacked all the article source files to a temporary location In this example I have put the files in Document s JMLR OriginalFiles listed as follows Documents JMLR OriginalFiles beerlla beerlla tex references bib shapes pdtf darcella figs shapes png darcella tex refs bib doella doella tex refsl b D refs2 blb results tex smithlla jmlr2e sty refs bib shapes eps smithlla tex winterlla 4 CREATING A NEW BOOK 7 figs shapes pdf MVS CULE ALY refs bib winterlla tex There are some commonly encountered issues with some of these source files 1 Some of t
28. h you do not control copyright Those thus making or running the covered work for you must do so exclusively on your behalf under your direction and control on terms that prohibit them from making any copies ot your copyrighted material outside their relationship with you Conveying under any other circumstances is permitted solely under the conditions stated below Sublicensing is not allowed section 1 makes it unnecessary 3 Protecting Users Legal Rights From Anti Circumvention Law No covered work shall be deemed part of an effective technological measure under any applicable law fulfilling obligations under article 11 of the WIPO copyright treaty adopted on 20 December 1996 or Similar laws prohbizbriting or restricting circumvention or Such measures When you convey a covered work you waive any legal power to forbic circumvention of technological measures to the extent such circumvent 1s effected by exercising rights under this License with respect to the covered work and you disclaim any intention to limit operation c modification of the work as a means of enforcing against the work s Users your or third parties Legal rights to TOrbid circumvention Oi technological measures 4 Conveying Verbatim Copies You may convey verbatim copies of the Program s source code as you receive it in any medium provided that you conspicuously and appropriately publish on each copy an appropriate copyright notice keep intact all no
29. he articles have PDF or PNG images which indicates that their authors use pdflatex but one of the articles smith11a has an EPS file which means that author used latex rather than pdflatex The original latex application which creates a DVI file can read EPS files but it can t read PDF or PNG or JPG files Whereas pdflatex can read PDF PNG and JPG files but can t read EPS files When we compile the book we can t switch output devices during compilation so this could potentially cause problems Luckily most modern TEX distributions are able to convert EPS to PDF dur ing document compilation but to ensure this works the image file should be included in the document using includegraphics imagefile where imagefile is the name of the image file without the file extension This is one of the reasons why MakeJmlrBookGUI uses pdf latex rather than latex Unfortunately in this example the author has used the obso lete epsfig package and has included the image with Neps fig This means that in order for the book to compile correctly all instances of epsfig must be replaced with includegraphics with the file extension re moved This is a time consuming task especially if the author hasn t used a single t ex file for the article source but has spread the document code out in multiple tex files that have been included with N input MakeJmlrBookGUI s new book function tries to overcome this problem by performing the substitut
30. he new book function tries to detect characters that have a known IATEX equivalent and replace them accordingly but it doesn t check the bib files which may contain non ASCII characters 7 Figure 29 one of the papers winterlla has loaded siunitx but the main book file hasn t To correct the problem add the package to the main book file Remember that all packages that must be loaded before hyperref should be included as follows def jmlrprehyperref usepackage siunitx usepackage booktabs Ndocumentclass wcp jmlrbook This is something that the new book function does automatically provided the package 1s installed in your TEX distribution 8 Figure 30 one of the imported papers doella contains a copy of an old version of the xfrac package This old copy should be removed so that all files use the same version of that package The new book function doesn t copy across any packages that the authors may provided with their document source but instead checks that the pack ages required are installed in your TEX distribution 9 1 EXAMPLES OF COMMON PROBLEMS 36 makejmlrbookgui missing sty sample File Build Tools Settings Help C missing sty preface missing sty sample tex 5 beerlla 3 darcelli JMLR W amp CP Volume 42 Making JMLR Proceedings 5 doella 3 smith114 Workshop on Something 3 winter11 jmlrbook cls version 1 21 2014 11 10 Location home nlct texmt tex latex jmlr jml
31. i videos Ci good sample Gd beer1la 5 beerlla tex Each of these contains 5 paper4 hib Ndocumentclass jmlr 5 bookLogo gray png 4 bookLogo png L2 darcella 5 papers bib e L2 doella 5 paperl bib 3 jmlrbook sample tex Contains documentclass jmlrbook gt E smithlla paper3 bib e L2 winterlla 5 paper2 bib fc winterlla tex Figure 1 Sample Book File List Most of the examples in this document use the file list shown in Figure 1 The files beerlla tex darcella tex doella tex smithlla tex and winterlla tex are individual JMLR papers The file names used are those required by the JMLR naming conventions surname of first author followed by two digit year of publication and iterative letter code Each of these files uses the jmlr class and can be compiled as a standalone document 1 INTRODUCTION 2 The file jmlrbook sample tex is the main book file which imports each of the standalone articles listed above This file uses the jmlrbook class It also contains the following lines begin jmlrpapers importpaper beerlla beerlla importpaper darcella darcella importpaper doella doella importpaper smithlla smithlla importpaper winterlla winterlla end jmlrpapers You also need to ensure that the main book file includes all the packages used by the imported articles If you re wondering how it is that a TEX document can import files that each contain a NHdocument class comma
32. igina Appendices Import tex File Is a reprint of a JMLR W amp CP article Origina Figure 15 CiML Import Article Specified To add a new article to the list click the new row button to add a new import panel To add a new part panel click on the Add Part button You can reorder articles within a part using the up or down arrow buttons If you have put an article in the wrong part you can use the remove button to remove the article s import panel and then add a new import panel in the correct part In Figure 17 I have selected all my sample files The first part has the title Fundamentals and Theory and has the beer11a and darcella articles The second part has the title Applications and has the doella and smithlla articles The final article winterl1la is in the appendices section Figure 18 shows the equivalent JMLR panel When you re ready click on the Next button to move to the next screen as shown in Figure 19 This screen specifies in which directory the new book will be created The default name for this directory 1s given by Volume followed by the volume number Earlier in this example I entered 42 for the volume 4 CREATING A NEW BOOK 18 _ New Book Setup s rm Part 1 Fundamentals and Theo dh St Import tex File nalFiles MaryJanedeBeer article tex 3 Appendices _ E Figure 16 JMLR Import Article Specified 4 CREATING A NEW BOOK _ New Setup tr T
33. ions for you 2 Another problem with the smith11a article is that it uses the old jmlr2e package with the article class instead of using just the new jmlr class Since jmlrbook depends on the imported articles using the jmlr class this will cause a problem when compiling the book MakeJmlrBookGUI s new book function can detect this problem and will perform the relevant substitutions Another reason is that pdflatex handles hyperlinks better than latex 4 CREATING A NEW BOOK 8 3 Inthe winter11a article the author has provided a custom package called mystuff sty loadedinwinterlla tex This typically just contains a series of short cut command definitions Since this isn t a standard pack age the main book file won t find it While it is possible to just put a copy of mystuff sty in the main book directory it s possible that the defini tions inmystuff sty will conflict with custom commands defined in the other articles For example it s quite typical for authors to define eg as a short cut for e g possibly with space factor adjustments When each article is imported into the book the article source is scoped so that any definitions made with newcommand or renewcommand only have an effect within the article This means that if say both beerlla tex and doella tex have newcommand eg e g there won t be aconflict However ifmystuff sty has also defined eg and you include it in the main book file the
34. irectory 6 1 Building the Main Book PDF The entire book can be created using the Build Book Color Hyperlinked PDF menu item Since the jmlr and jmlrbook classes use the hyperref package the resulting PDF will have hyperlinks and a set of PDF bookmarks You may find the bookmark package better at forming the bookmarks but that package must be loaded last 6 2 Building the Print Version If the book is to be printed you need to supply the publisher with a PDF I X compliant document MakeJmlrBookGUI tries to make a grey scale compliant document using ghostscript However it is recommended that you check that the resulting document is compliant 6 3 Building Individual Papers It may be that you are working on one particular paper and don t want to have to keep rebuilding the entire book to check your changes In which case you can use the Build Papers sub menu 6 4 Building HTML Files The JMLR W amp CP require an index file and HTML files for each paper abstract These can be created using the Build HTML menu item which uses tex4ht 7 THE TOOLS MENU 25 Note that you will probably need to do some manual tweaking to the resulting files If you have used Nappendix outside of the jmlrpapers environment any included articles after that will be considered supplemental material and won t be listed in the index html file 7 The Tools Menu Use Tools Remove Aux to remove all the auxiliary files If you want to abort a
35. l TER GeXPRESSED OR IMPLLED INCLUDING BUT NOT EIMITRD IHE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULA PURPOSE IHE ENTIRE RISK AS IO IHE QUALITY AND PERFORMANCE OF THE PE Lo WITH YOU oHOULD THE PROGRAM PROVE DEFECTIVE YOU ASSUME THE COSI ALL NECESSARY SERVICING REPAIR OR CORRECTION o Jum at Om DE baie a Lae ye IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITI WILL ANY COPYRIGHT HOLDER OR ANY OTHER PARTY WHO MODIFIES AND OR COD IHE PROGRAM AS PERMITTED ABOVE BE LIABLE TO YOU FOR DAMAGES INCLUDI GENERAL SPECIAL INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF USE OR INABILITY TO USE THE PROGRAM INCLUDING BUT NOT LIMITED IO LOS DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAM EVEN LE SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED QR THE POSSIBILI SUCH DAMAGES 17 Interpretation of Sections 15 and 16 10 LICENCE 56 If the disclaimer of warranty and limitation of liability provided above cannot be given local legal effect according to their terms reviewing courts shall apply local law that most closely approximates an absolute waiver of all civil liability in connection with the Program unless a warranty or assumption of Liability accompanies a copy of the Program in return for a fee END OF TERMS AND CONDITIONS How to Apply These Terms to Your New Programs If you develop a new p
36. n eg will already be defined when beerlla tex and doella tex try to define it Therefore it s not a good idea to use mystuff sty for the book If the mystuff pack age Just contains a series of command definitions then the best course of action is to just copy those command definitions into the article s main file winterlla texinthis case and remove usepackage mystuff MakeJmlrBookGUI s new book function will alert you if an article tries to load a package that 1s not in your TEX distribution 4 The darce11a article has a subdirectory for images figs and has used graphicspath instead of specifying the subdirectory in includegraphics This can cause a problem when compiling the main book as the jmlrbook class needs to modify the input paths when importing articles to ensure that any relative paths are correctly resolved MakeJmlrBookGUI s new book function solves this problem by remov ing Ngraphicspath and inserting the subdirectory in the argument of xancludegraphics 5 The doe11a article has multiple tex files The main fileisdoella tex which includes via Ninput the file results tex This won t in itself cause a problem when the book is compiled but if the author has made an error in the file it s harder to track down which file the problem is in To overcome this MakeJmlrBookGUI s new book function will insert all the included files to create a single tex file 4 CREATING A NEW BOOK 9 Note that the new book functi
37. n other than the making of exact copy The resulting work is called a modified version of the earlier work or a work based on the earlier work A covered work means either the unmodified Program or a work base on the Program To propagate a work means to do anything with it that without permission would make you directly or secondarily liable for infringement under applicable copyright law except executing it on e COmpuLter or modifying e private copy Propagation Includes copying distribution with or without modification making available to the public and in some countries other activities as well To convey a work means any kind of propagation that enables other parties to make or receive copies Mere interaction with a user thrc a computer network with no transfer of a copy is not conveying An interactive user interface displays Appropriate Legal Notices to the extent that it includes a convenient and prominently visible feature that 1 displays an appropriate copyright notice and 2 tells the user that there is no warranty for the work except to the extent that warranties are provided that licensees may convey the work under this License and how to view a copy of this License If the interface presents a list of user commands or options such as a menu a prominent item in the list meets this criterion 1 Source Code The source code for a work means the preferred form of the work for making modifica
38. n image viewer is only required if you want to load an image from the file list tab General To help prevent orphaned processes each spawned process such as a IATEX run is given a maximum process time The default is 5 minutes which is usually sufficient for a normal IATEX run but more time may be required when converting a PDF file to PDF X as 1s done by the build print version function Large books with a lot of included images can take considerably longer in which case you will need to change the maximum process time before you run the process Changing this value won t affect currently run ning processes For debugging purposes you can also switch on the logging file in this tab You must quit and restart the application to enable logging The log file is overwritten at the start of the application Make sure you first quit the application before viewing the log file to ensure that it 1s closed safely Some of the error messages display in the main panel have a link next to them that opens a dialog window with further details and recommendations The default link shows the information icon gy On some operating systems or Java versions this icon doesn t seem to show If this is the case or if you prefer text rather than an image you can select the appropriate Error Details link radio button 9 TROUBLESHOOTING 20 9 Troubleshooting MakeJmlrBookGUI tries to detect common problems encountered when using the jmlrbook cla
39. nd the jmlrbook class uses the combine class which makes this possible Since it can be rather complicated to set up the main book file MakeJmlr BookGUI has a function that can do this for you I strongly recommend you use this function to help reduce the chances of complicated errors See 4 Creating a New Book for further details To start MakeJmlrBookGUI run the command make jmlrbookgui The following options are available version Print application version number help Print application version number and syntax debug Switch on debug mode nodebug Switch off debug mode default timeout n Set the maximum length of time for processes where n is an in teger representing the number of milliseconds until the process times out This ensures that if things go very badly wrong and one of the processes doesn t complete e g TEX gets stuck in an infinite loop it will be termi nated after the given length of time Otherwise the process will carry on even after you ve quit MakeJmlrBookGUI 1 INTRODUCTION 3 Note you can use sectioning commands such as chapter outside of the imported papers for example you may want supplemental material in an ap pendix However chapter appendix etc must be placed outside of the jmlrpapers environment For example begin jmlrpapers importpaper beerlla beerlla importpaper darcella darcella importpaper doella doella importpaper smithlla smithlla importpaper winte
40. nvey the object code using peer to peer transmission provic you inform other peers where the object code and Corresponding Source of the work are being offered to the general public at no charge under subsection 60d A separable portion of the object code whose source code is excluc from the Corresponding Source as a System Library need not be included in conveying the object code work A User Product is either 1 a consumer product which means ar tangible personal property which is normally used for personal famil or household purposes or 2 anything designed or sold for incorpore into a dwelling In determining whether a product is a consumer proc doubtful cases shall be resolved in favor of coverage For a particu product received by a particular user normally used refers to a typical or common use of that class of product regardless of the ste of the particular user or of the way in which the particular user actually uses or expects or is expected to use the product A proc 1S a consumer product regardless of whether the product has substanti commercial industrial or non consumer uses unless such uses represe the only srgniricant mode or use Of the product Installation Information for a User Product means any methods procedures authorization keys or other information required to inst and execute modified versions of a covered work in that User Product a modified version of its Corresponding Source The information must
41. nyone who possesses the object code either 1 a copy of the Corresponding Source for all the software in the product that is covered by this License on a durable physical medium customarily used for software interchange for a price no more than your reasonable cost of physically performing this conveying of source or 2 access to copy the Corresponding Source from a network server at no charge c Convey individual copies of the object code with a copy of the written offer to provide the Corresponding Source This alternative is allowed only occasionally and noncommercially anc only if you received the object code with such an offer in accor with subsection 60b d Convey the object code by offering access from a designated place gratis or for a charge and offer equivalent access to tr Corresponding Source in the same way through the same place at nc further charge You need not require recipients to copy the Corresponding Source along with the object code If the place tc copy the object code is a network server the Corresponding Sourc may be on a different server operated by you or a third party that supports equivalent copying facilities provided you maintai clear directions next to the object code saying where to find the Corresponding Source Regardless of what server hosts the Corresponding Source you remain obligated to ensure that it is 10 LICENCE 48 avallable for as long as needed to satisfy these requirements e Co
42. of parties who have received copies or rights from you under this License If your rights have been terminated and not permanent reinstated you do not qualify to receive new licenses for the same material under section 10 9 Acceptance Not Required for Having Copies You are not required to accept this License in order to receive or run a copy of the Program Ancillary propagation of a covered work occurring solely as a consequence of using peer to peer transmission to receive a copy likewise does not require acceptance However nothing other than this License grants you permission to propagate or modify any covered work These actions infringe copyright if you do not accept this License Therefore by modifying or propagating a covered work you indicate your acceptance of this License to do so 10 Automatic Licensing of Downstream Recipients Each time you convey a covered work the recipient automatically receives a license from the original licensors to run modify and 10 LICENCE SZ propagate that work subject to this License You are not responsibl for enforcing compliance by third parties with this License An entity transaction 8 3 trd usdctron transferring Control or wr Orqanpzzatoon orf substantially all assets OE one Or subdividing an organization or merging organizations If propagation of a covered Work results from an entity transaction each party to that transaction who receives a copy of the work also re
43. on creates copies of the source files rather than modifying the originals so you will still have the originals for reference or to fall back on if something goes wrong To create a new book use the File New Book menu item This will display the dialog shown in Figure 3 LI New Book Setup at xj his dialog is provided to help you to set up a new JMLR or CiML book In the next panel you need to choose the JMLR W amp CP option for a JMLR Workshop and Conference Proceedings to create HTML files for he JMLR website or the CiML option for a Challenges in Machine Learning book to be published by Microtome Please make sure you choose the correct option as the setup for the two types of book is different Before you continue please ensure that you have unpacked the LaTeX source files for all of the articles to be incorporated into the book These source files should be put in a temporary location They will be copied to the book directory at the end of this setup You will be given the opportunity to change the default book directory later Once you are ready please click on Next to continua Figure 3 New Book Dialog Initial Screen When you re ready click Next to move to the next screen shown in Figure 4 If you are creating a CIML book click on the CiML radio button which will display the screen shown in Figure 5 In both cases you need to specify each editor individually in the Editor s table En
44. ource code or can get it if you want it that you can change the software or use pieces of it in new free programs and that you know you can do these things To protect your rights we need to prevent others from denying you these rights or asking you to surrender the rights Therefore you Lt certain responsibilities if you distribute copies of the software or you modify it responsibilities to respect the freedom of others For example if you distribute copies of such a program whether gratis or for a fee you must pass on to the recipients the same freedoms that you received You must make sure that they too recei Or can get the source code And you must show them these terms so tr know their rights 10 LICENCE 42 Developers that use the GNU GPL protect your rights with two steps 1 assert copyright on the software and 2 offer you this License giving you legal permission to Copy drstribute and or modify TE For the developers and authors protection the GPL clearly explai that there 1S no warranty for this free software For both users ar authors sake the GPL requires that modified versions be marked as changed so that their problems will not be attributed erroneously tc authors of previous versions Some devices are designed to deny users access to install or run modified versions of the software inside them although the manufactt can do so This is fundamentally incompatible with the aim of protecting u
45. r1 paper2 Directory home nlct programming java jmlr src tests problemsty sample T 5 papers File papera Name Author s J Doe and J Smith Jones paperl tex Tag doe Jmircis i 2014 11 10 version Location home nict texmf tex latex jmlr jmlr cls Pages 1 7 Class jmlr Error Package theorem detected 123 begin document D sj LaTeX reported 1 error This document has used package theorem that is known to cause problems i for the jmlrbook class File name doesn t conform to JMLR naming conventions pattern used for check doe d d a z Directory I name doesn la conform to JMLR naming conventions edu proceedings fag html for details Last Modified 29 Jan 2015 11 25 38 View BibTeX Log Last Modified 29 Jan 2015 11 13 38 View PDF Last Modified 29 Jan 2015 11 25 38 Edit Source Last Modified 02 Mar 2013 15 15 55 Figure 26 One of the imported papers is using a package that is known to conflict with the jmlr bundle 9 1 EXAMPLES OF COMMON PROBLEMS 33 makejmlrbookgui wrongcls sample File Build Tools Settings Help 5 preface 5 paperl D paper2 5 paper3 5 paper4 File Name Author s jmlr cls version Pages 17 22 L2 jmlr title LaTeX Error Missing begin document 1 2 jmlr title T Undefined control sequence 1 3 jmlr author 1 3 jmlr author name L3 jmlr author n
46. ranted prior to 28 March 2007 Nothing xm this License onere construed as excluding Or lama inc any implied license or other defenses to infringement that may otherwise be available to you under applicable patent law 12 No Surrender of Others Freedom If conditions are imposed on you whether by court order agreement otherwise that contradict the conditions of this License they do nc excuse you from the conditions of this License If you cannot convey covered work so as to satisfy simultaneously your obligations under t License and any other pertinent obligations then as a consequence yc not convey it at all For example if you agree to terms that oblige to collect a royalty for further conveying from those to whom you cor the Program the only way you could satisfy both those terms and this License would be to refrain entirely from conveying the Program 13 Use with the GNU Affero General Public License Notwithstanding any other provision of this License you have permission to link or combine any covered work with a work licensed under version 3 of the GNU Affero General Public License into a singl combined work and to convey the resulting work The terms of this License will continue to apply to the part which is the covered work but the special requirements of the GNU Affero General Public License section 13 concerning interaction through a network will apply to tr combination as Sucha 14 Revised Versions of this License
47. rbook cls jmir cls version 1 21 2014 11 10 Location home nlct texmt tex latex jmlr jmlr cls JMLR Volume 42 Import file winter11a has loaded package siunitx but main book file has not View Log Last Modified 29 Jan 2015 11 40 45 View PDF Last Modified 29 Jan 2015 11 40 45 Edit Source Last Modified 29 Jan 2015 11 40 40 Preface Source missing sty sample tex File pretace tex start 1 End 1 Editor 1 Nicola Talbot i University of East Anglia Figure 29 One of the imported papers winterl1a has loaded a package siunitx that has not been loaded by the main book file 9 1 EXAMPLES OF COMMON PROBLEMS 37 makejmlrbookgui mismatched sty sample File Build Tools Settings Help T Da O mismatched sty sample tex 3 beer11a 3darce114 JMLR W amp CP Volume 42 Making JMLR Proceedings CY doe11a 3 smithlle Workshop on Something 4 winterl1 jmlrbook cls version 1 21 2014 11 10 Location home nlct texmt tex latex jmlr jmlrbook cls jmlr cls version 1 21 2014 11 10 Location home nlct texmt tex latex jmlr jmlr cls JMLR Volume 42 Import file doe11a has loaded package xtrac dated 2008 8 10 but main book file has loaded package xfrac dated 2014 5 4 View Log Last Modified 29 Jan 2015 11 49 33 View PDF Last Modified 29 Jan 2015 11 48 33 Edit Source Last Modified 29 Jan 2015 11 43 42 Preface Source mismatched sty sample
48. rlla winterlla end jmlrpapers appendix chapter Datasets Or begin jmlrpapers importpaper beerlla beerlla importpaper darcella darcella importpaper doella doella importpaper smithlla smithlla importpaper winterlla winterlla end jmlrpapers Nappendix begin jmlrpapers importarticle dataset dataset end jmlrpapers 2 INSTALLING THE JMLR LATEX BUNDLE 4 2 Installing the JMLR LaTeX Bundle This application requires an up to date version of the jmlr bundle installed on your computer This should be properly installed not just placed in the same directory as the book If you don t have the jmlr bundle installed or your version is too old you can use your TEX installation package manager to install or update the class files or you can use MakeJmlrBookGUT s Tools Fetch JMLR LaTeX Bundle menu item Alternatively you can install manually 1 Find out where to install TEX bundles on your computer if you don t already know To do this open a command prompt or terminal and type kpsewhich var value TEXMFHOME This should print the name of the appropriate directory For example texmf or C localtexmf 2 Fetch the installation bundle from http mirror ctan org install Macros lartex ocontrib J mlr tgls zip 3 Extract the above ZIP file to the directory given in Step 1 For example on Unix like systems unzip d texmf Downloads jmlr tds zip 4 Update the TEX database There sho
49. rocess timed out process time limit 300000ms Cause a spawned process has been aborted because it has taken too long to complete The default time out value is 300000ms 5 minutes This most likely means that the process has got stuck but if you have a very slow machine and a very large book you may need to increase the time out threshold using the timeout command line switch LaleX Message LaTeX Error Command c lenddoca already defined Or name end illegal see p 192 of the manual Acronyms 39 Cause conflict between combine cls and hyperref sty You need to upgrade to at least version 1 16 of jmlr cls and jmlrbook cls Acronyms CiML Challenges in Machine Learning 1 9 12 17 27 CTAN the Comprehensive TeX Archive Network 21 JMLR Journal of Machine Learning Research 1 9 12 17 22 24 27 28 Index Nappendix 3 25 article 7 29 bookmark 24 Build menu 24 Book Color Hyperlinked PDF 24 HTML 24 28 Papers 24 chapter 3 combine 2 documentclass 1 2 17 epsfig 7 epsfig 7 29 File menu Clear 22 Export Messages 5 New Book 9 29 Open Book 22 Recent Book 22 gedit 28 ghostscript 24 27 graphicspath 8 htlatex 27 hyperref 24 35 importpaper 38 includegraphics 7 8 XLNpuk 50 inputenc 35 inputencoding 35 jmlr 1 1 4 7 24 27 29 jmlr2e 7 29 jmlrbook 1 2 7 8 22 24 27 29 jmlrpapers 3 25 kpsewhich 27 latex 7
50. rogram and you want it to be of the greatest possible use to the public the best way to achieve this is to make 1 free software which everyone can redistribute and change under these To do so attach the following notices to the program It is safes to attach them to the start of each source file to most effectively state the exclusion of warranty and each file should have at least the copyright line and a pointer to where the full notice is found one line to give the program s name and a brief idea of what it Copyright C year name of author This program is free software you can redistribute it and or moc it under the terms of the GNU General Public License as publishec the Pree Sortware Foundation either version 3 ot the License or at your option any later version Ihis program is distributed in the hope that it will be useful but WITHOUT ANY WARRANTY without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE oee the GNU General Public License for more details You should have received a copy of the GNU General Public License along with this program If not see http www gnu org license Also add information on how to contact you by electronic and paper me If the program does terminal interaction make it output a short notice like this when it starts in an interactive mode 10 LICENCE 57 program Copyright C lt year gt name of author Ihis program comes with ABS
51. s message box you can view the transcript in the final screen of the new book dialog see Figure 21 If you want a copy of this transcript you can copy it to the clipboard using the Copy button If you want to view the newly created book file click on the View main tex button You can now either close the new book dialog by clicking on the close win dow button in the title bar which will do nothing further or you can click on the Finish button which will close the dialog and load the new book into MakeJml rBookGUI 5 Loading a Book Use the File Open Book menu item to specify the main file for the JMLR book you want to process Figure 22 Alternatively you can use the File Re cent Book menu to select a recently loaded file Note that the main file 1s the file that loads the jmlrbook class using documentclass jmlrbook If you don t yet have a main file you can create one with the new book function see 4 Creating a New Book Once a book has been loaded IATEX and possibly BibTEX will automatically be run to create an up to date version of the book To clear the book details so that you can open a new one use the File Clear menu item 5 LOADING A BOOK 23 L New Book Setup sti i x Generating Volume42 Front Matter Creating directory home nlct Documents Volume42 FrontMatter Preface Writing home nlct Documents Volume42 FrontMatter preface tex Main Matter 4 i
52. sers freedom to change the software The systematic pattern of such abuse occurs in the area of products for individuals use which is precisely where it is most unacceptable Therefore we have designed this version of the GPL to prohibit the practice for tt products If such problems arise substantially in other domains we stand ready to extend this provision to those domains in future versi of the GPL as needed to protect the freedom of users Finally every program is threatened constantly by software patents States should not allow patents to restrict development and use of software on general purpose computers but in those that do we wish avoid the special danger that patents applied to a free program coulc make it effectively proprietary To prevent this the GPL assures ttr patents cannot be used to render the program non free The precise terms and condrtrons Sor copying drstrrbutron and moditicatiom rod Vow TERMS AND CONDITIONS DST Is Orn This License refers to version 3 of the GNU General Public Licens Copyright also means copyright like laws that apply to other kinc works such as semiconductor masks The Program refers to any copyrightable work licensed under this 10 LICENCE 43 License Each licensee is addressed as you Licensees and recipients may be individuals or organizations To modify a work means to copy from or adapt all or part of the w in a fashion requiring copyright permissio
53. ss The navigation panel shows the problem papers in red to easily identify them As mentioned at the end of the previous section some of these error messages have a link next to them to provide further details or recommendations Try to fix the errors in the individual papers before you try addressing the errors for the entire book Most of the errors listed here shouldn t occur if you set up the book using the File New Book function Be careful of imported articles that use a different input encoding to the main book This will not always produce an error message but characters will not appear correctly in the PDF file See Example 6 9 1 Examples of common problems 1 Figure 24 one of the imported papers beerl1a has an error in it Clicking on the red beerlla link in the navigation panel scrolls the main panel to the relevant entry In this case the error is an undefined control sequence which has been used on line 31 It may be that the command was defined in an accompanying package that hasn t been loaded 2 Figure 25 one of the imported papers smithl1a has a copy of an old ver sion of the jmlr class in its directory This unwanted file should be deleted 3 Figure 26 one of the papers paperl in this book has used a package theorem that is known to conflict with the jmlr and jmlrbook classes The imported document must be modified so that it no longer uses that package This is an issue that is corrected by the ne
54. ter the first editor name in the Editor 1 Name field To add a new editor field click on the add button If you want to delete an editor field select the unwanted field and click on the remove button Sample title information for a JMLR book 1s shown in Figure 6 When you have finished specifying the title information click on Next to move to the next screen If you have specified a JMLR book the screen will be as shown in Figure 7 If you have specified a CIML book the screen will be as shown in Figure 8 In both cases there is the option to have a preface at the start of the book If the book requires a preface check the Yes the book should have a preface button If you already have a file containing the preface text select the Preface tex source file button and use the file selector to specify the location of this file CREATING A NEW BOOK New Book Setup x f Type of Book J MLR W amp CP CiML JMLR W amp CP Volume Editor s Editor 1 Name Figure 4 JMLR Title Setup _ New Book Setup Rabbi x E Type of Book IMLR W amp CP amp ICIML Volume Optional Optional Production Editor Optional Editor s Editor 1 Name SO Figure 5 CiML Title Setup 10 4 CREATING A NEW BOOK 11 Type of Book MLR W amp CP CiML UMLR W amp CP Volume 42 Title Proceedings of the International Conference on Artificial Intelligence ICAl 14
55. tices stating that this License and any non permissive terms added in accord with section 7 apply to the code keep intact all notices of the absence of any warranty and give all recipients a copy of this License along with the Program 10 LICENCE 46 You may charge any price or no price for each copy that you convey and you may offer support or warranty protection for a fee 5 Conveying Modified Source Versions You may convey a work based on the Program or the modifications tc produce it from the Program in the form of source code under the terms of section 4 provided that you also meet all of these conditic a The work must carry prominent notices stating that you modifie 1t and giving a relevant date b The work must carry prominent notices stating that it is released under this License and any conditions added under sectic 7 This requirement modifies the requirement in section 4 to keep intact all notices C You must license the entire work as a whole under this License to anyone who comes into possession of a copy This License will therefore apply along with any applicable section 7 additional terms to the whole of the work and all its parts regardless of how they are packaged This License gives no permission to license the work in any other way but it does not invalidate such permission if you have separately received it d If the work has interactive user interfaces each must display Appropriate Legal Notic
56. tions to it Object code means any non source LOr Or a WORK A Standard Interface means an interface that either is an officie standard defined by a recognized standards body or in the case of interfaces specified for a particular programming language one that 1s widely used among developers working in that language 10 LICENCE 44 The System Libraries of an executable work include anything othe than the work as a whole that a is included in the normal form of packaging a Major Component but which is not part of that Major Component and b serves only to enable use of the work with that Major Component or to implement a Standard Interface for which an implementation is available to the public in source code form A Major Component in this context means a major essential component kernel window system and so on of the specific operating system if any on which the executable work runs or a compiler used to produce the work or an object code interpreter used to run it The Corresponding Source for a work in object code form means all the source code needed to generate install and for an executable work run the object code and to modify the work including scripts t control those activities However it does not include the work s System Libraries or general purpose tools or generally available fre programs which are used unmodified in performing those activities but which are not part of the work For example
57. try would infringe one or more identifiable patents in that country that you have reason to believe are valid lr Pursualt bo SF nm Connection WIEN a Sngle Transaction DE arrangement you convey or propagate by procuring conveyance of a covered work and grant a patent license to some of the parties receiving the covered work authorizing them to use propagate modify or convey a specific copy of the covered work then the patent licens you grant is automatically extended to all recipients of the covered work and works based on it A patent license is discriminatory if it does not include within the scope of its coverage prohibits the exercise of or is conditioned on the non exercise of one or more of the rights that are Specifically granted under this License You may not convey a covere work if you are a party to an arrangement with a third party that is in the business of distributing software under which you make paymer to the third party based on the extent of your activity of conveying the work and under which the third party grants to any of the parties who would receive the covered work from you a discriminatory patent license a in connection with copies of the covered work conveyed by you or copies made from those copies or b primarily 10 LICENCE 54 Lor and Li CGONNEectCLon Wash peccrtrc products Or comprblatrons Chat contain the covered work unless you entered into that arrangement or that patent license was g
58. uld be a command called texhash or mktexlsr Run it with the name provided in Step 1 For example mktexlsr Ct localtexmr or texhash texmf 3 Main Window The main window Figure 2 has a tool bar two tabbed panes and a status bar The tool bar may be reposition above below left or right of the tabbed panes The status bar is always positioned below the tabbed panes The tabbed panes consist of 3 MAIN WINDOW 5 File Build Settings Help MakeJmirBooKGUI good sample MakejmirBookGUI good sample File Build Settings Help nl BR eo e E dh a eu Q Book View Files J jmirbook sample D preface D beerlla D darcella 3 doe11a D smithlla D winterlla jmlrbook sample tex jmlrbook cls version Location jmlr cls version 1 15 2012 5 12 home ezno86edu texmf tex latex jmlr jmlrbook cls r 1 15 2012 5 12 Book View Files J good sample CE beerlla 3 beerlla tex D paper4 bib 3 bookLogo gray png D bookLogo png i darcella 3 darcella tex Location home eznOGedu texmft tex latex jmlr jmlr cls 3 paperS bib 9 E doella D doella tex D paperl bib 3 imirbook sample tex Volume 42 View PDF Last Modified 12 May 2012 15 59 02 Edit Source Last Modified 12 May 2012 15 35 28 Preface D paperl bib 9 E smith11a preface tex 3 paper3 bib x 1 D smithlla tex E winterlla D paper2 bib D winterlla tex Source jmlrbook sample tex 1 Nicola Talbot Uni
59. versity of East Anglia href mailto N Talbot uea ac uk nolinkurl N Talbot uea ac uk Editor Anne Editor University of Nowhere href 2 mailto ae sample com nolinkurl ae sample com Imported Paper beerlla Label beer11a beer11a Directory home eznO6edu programming java jmlr tests good samp File beer11a tex 4 ii a b Figure 2 The Main Window a the book details visible b the book file list visible Book Details Tab Select the book details tab to show information about the book Figure 2 a This tab has a navigation panel with links to information about the imported articles The book details include links to edit the source code or view the resulting document files You can set the applications required to edit text files view HTML files or view PDF files using the properties dialog You can save this information using the File Export Messages function to export to an HTML file The further information buttons won t work in the exported HTML file There are two types of the complete book PDF that you can create the colour version with hyperlinks for on line viewing and the grey version without hyperlinks for printing The links to these PDF files are identified as View PDF On Line Version and View PDF Print Version The book details tab also lists any errors that were encountered when com piling the book shown in red and i
60. w book function Note that this example has also produced non conformity error messages shown in purple 4 Figure 27 one of the papers in this book paper3 is not using the jmlr class It s using the article class This 1s the reason for all the obscure error messages It s also using obsolete packages jmlr2e and epsfig These problems must all be fixed This 1s an issue that is corrected by the new book function 5 Figure 28 one of the papers was misspelt in the main book file Instead of importpaper smithlla smithlla it was written as 9 1 EXAMPLES OF COMMON PROBLEMS 30 makejmlrbookgui error in paper sample File Build Tools Settings Help o J error in paper samp Imported Paper beer11a 4 preface D bert a 4 darcella 4 doella 4 smithlla 3 winterlla jmir cls version Location home nlct texmf tex latex jmlr jmlr cls File Name Label beer11a beer11a Directory home nlct programming java jmlr src tests error in pape File Name Author s M J de Beer Tag beer beer11a tex 1 21 2014 11 10 Pages 3 8 Undefined control sequence amp 1 31 This paper has an unknown command wibble d View Log Last Modified 29 Jan 2015 10 47 14 View BibTeX Log Last Modified 29 Jan 2015 10 46 33 View PDF Last Modified 29 Jan 2015 10 47 14 Edit Source Last Modified 02 Mar 2013 18 13 53 Imported Paper darcella Label darce11a darcella

MakeJmlrBookGUI User Manual Version 0.9.2b

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