OsiriX User Manual
Contents
1. 0000000005 8 2 3D Viewing Functions 24 222 soe a DANS ore SPB PS ae es Stirface Rendering ve ap abs ead 2 aed Boe eS de eae a 3D Surface Rendering Engine o o ooooooooo o Projections m de s ried e a rap ee a we aa Sculpting 3D images 6 6 ee eee Image FUSIONA n s ef tsa ae cag Pace ee a agate eng a PEN AD Dataset vs ox ina a Eee Ae ee Ne o ROIs 8 3 Exporting 3D Images o i aalma a ae eines hee Goal ae he hay PS Exporting QuickTime Movies o ooo ooo oo 8 3 2 Exporting QuickTime VR Movies ooo oo o o 8 3 1 9 The 3D Endoscopy 9 1 The Anatomy of the Endoscopy Viewer 000000005 TOOID ar e256 ia A ea re ee A a ee a 9 1 1 9 2 1 9 1 1 1 9 1 1 2 9 1 1 3 9 1 1 4 9 1 1 5 9 1 1 6 9 1 1 7 9 1 1 8 9 1 1 9 Save as DICOM eee bp ee ee ed SRE es 3D Mouse button function 3D View MPR Mouse button function MPR Views Fly Through 3D View o o o ooo o Path Assistant 3D View MPR Views 3D WL WW 3DView o ooo ee MPR WL WW MPR Views 3DCLUT BDVieW o ooooooo ooo MPR CLUT MPR Views o o 9 1 1 10 3D Opacity 3D View o o oooooo o o o 9 1 1 11 MPR Opacity MPR Views o 9 1 1 12 Shadings 3D View o o o o ooooooco o o 9 1 1 13 Level of Detail 3D View 9 2 Endoscopy Viewer Functions 2 6 ee Endoscopy Viewe2. o 46 SAAT TM port 6 os cove ii a e a ie ee pares EH 46 3 11 12 Meta Data o 46 BLAS Search ee pas en eh a ee ee RA 46 SALTA Query 2 32 tots Pd eth OS de he de eat Le 46 SALAS Report i s books eee Pes We Se Bh ed 47 3 11 16 ROIS amp Keys 234 io rata bled eo a 47 BALAZO a Wea a ae ed ee 47 STAR Send a w ne tae LoL eke aye a ee Beh Wks was eee cea 47 3 1 1 19 Time Interval 47 312 Study List ii ai a Se A E 47 3 3 Series List a5 wisi a a A Pe ok a a ee 50 3 1 4 Series Preview oss eras racs eoo ree ed a Ee 51 3 1 5 The side drawer 0 000 eee a 51 3151 The Albums 3 5 See SOR POE Se BRS Boe 51 3 1 5 2 The Sources 0 0 00 eee eee eee 53 3 1 5 3 The Activity Panel o o ooooooo o o 54 3 2 Files Management ssa s aa dp ena ape a dao e eh take 54 32b DIGOM Files ade se ta 54 3 2 1 1 Meta Data Window 54 3 2 2 Importing Images o o e co o o ee 55 3 23 Burning DICOM CD DVD 0005000 56 3 24 Series Parsing ah yk lad Pod Gs a Be Sale at ae Beards 57 3 2 5 The Database Folder 2 0000 a 58 3 2 6 Rebuilding the database 0 00000004 59 33 Database Structire ces eget gon te enh A oe Bd 60 391 Study Level meo isc Sng Sede wae ba a 60 3 32 Series Level y carer i e he ee he ee a oes 61 3 3 3 Image Level vo 6 4 00S ce deh wh eet ea wea tee tills 62 3 3 3 1 Compression of the SOPInstanceU
3. Contents Contents vi 1 Introduction 1 A 1 1 1 1 About DICOM sre dee earr ea 0 0 00 E e oe EA O eee 1 EA o os 3 4305 a a HR Led dons a a ea es 1 T2 Indications For Uses aii a Sa BAN Soe 4 3 GContr indicatons e aep ra ale Ba a p 4 14 Reporting A ProbleM o oooooooorr eee 4 1 4 1 Howtoreportaproblem 0 00000 oo 4 1 5 Requirements 2 ces a be nio a Re o a E aaa 6 126 Installation a a ay et a uae ea aa 7 TZ MacOS Kn ee ee a A ee EE he A ee ee EE yes 8 1 71 MOUSE ee soa o ee a ee be BR al Ha hbo ee 8 1 7 2 Keyboard Shortcuts sspe o ooo oo o 8 1 7 3 Window Toolbar 10 1 7 3 1 Toolbar Customization 10 1 8 Plugins e eki eo ds Sg Baye ie 11 1 8 0 2 Plugins Development o o ooo ooo 11 2 Preferences 13 A Basis haenen A NS 14 21T General coin a os 14 ZULIA Security it e 14 2 1 1 2 DICOM Toolkits 15 2 1 1 3 DICOM Compression 000004 15 2 1 1 4 Check version 0000 eee eee eee 15 2 1 1 5 DICOM Editing ooo ooo 15 21 2 Database sche dao a ae RA 16 2 1 2 1 File Management oo ooo 16 2 1 2 2 Database Display o o oooooooo o 17 2 1 2 3 Comments field 17 2422 4 Series Parsing scri da OS Mark hg ay hoe Se 18 2 1 2 0 Sort Series BY 23 kes o bl 18 212 6 SortImages By 2 7 2 5 4 44 a ete ear ee eS 18 2 1 2 7 Da
4. ee es 239 13 6 28 Find Previous Key Image 1 2 0 2 0 000 eee eee 239 13 6 29 Subtraction 2 ee 240 136 291 Subttact ui e ee a 240 13 6 29 2 New Mask 240 13 6 29 3 Sharpen ii a Wee Ae we Be 240 13 6 29 4 Pixel Shift 2 0 0 0 0 0 ee ee 240 13 6 29 5 Contrast Down 240 13 6 29 6 Contrast Default 240 13 60 29 7 Contrast Ups nts tie ek eee a ia 240 13 6 29 8 Brightness Down aaas aaae 240 13 6 29 9 Brightness Default o ooo oo 240 13 6 29 10Brightness Up 2 o 240 13 6 29 11Sum Less ee ee 241 13 6 29 12NO0 UM cari be ate bea a ee Ae ea 241 13 6 29 13Sum More 2 2 0 ee ee 241 13 6 30 Annotations er see pee e e Ae ee es 241 13 6 30 E None si a A a GA he a ols GG 241 13 6 30 2 Graphic Only 2 0 ee oo 241 13 6 30 3 Basic No Name o oo ooo o 241 13 6 30 4 Full Patient Name ooo oo 241 13 6 30 5 Plugin Ol A hala et 241 13 6 30 6 Display Cross Reference Lines 241 13 6 31 Window Width amp Level o 241 13 6 32 Color Look Up Table o o oooooooocooo oo 242 13 6 33 Color Look Up Table Bar o ooo ooo 242 13 634 Opacity bic sap epa 242 13 6 35 Convolution Filters 242 13 6 36 Apply Convolution Filters to raw data 242 13 6 37 Image Tilin lt lt comia a EA de 2
5. o o mo eee 80 4 2 6 Auto Query amp Retrieve o oo o e 81 4 2 7 AUOIQU NS cui ee BE Ee ee 81 4 2 8 Setting up OsiriX as a storage server PACS 82 2 9 lt SOCULILY a thos is Ge Ld iM See YS lle ea ES 82 4 2 10 Synchronize and Archive 2 0 eee eee 83 4 211 WADO ocio cote anti artis oe eee tec AL Hed eee Bde ad 84 4 2 12 DICOM Conformance Statement 84 4 3 Database Sharing m uryt peh a a e a Ta bp we ete Ss 84 4 4 Network Logs a nasriga tea Roy ads 84 45 HTTP Web Server 85 4b 1 Notifieations cid aoe box Me AA de 88 4524 Security aa Rae a edhe 88 45 3 Users Management o 89 4 5 4 Web Pages Customization 1 0 0000 eee eee 90 4 6 XML RPC s io erne aH er Anne te de Sew tous as 90 4 6 1 XML RPC Server Activation amp Setup o 91 4 6 2 Supported XML RPC Messages in OsiriX 91 4 6 3 XML RPC Messages format o oo 00000 94 4 64 XML RPC Response format o o ooo 94 4 6 5 Extending the XML RPC capabilities of OsiriX 96 4 7 Building a JPEG 2000 network 2 2 2 ee eee 97 A s cassie ie Sta na ae ayes oe Sale Se ep tea antl ted A teh tk TN 98 4 7 1 1 OsiriXServer 0 0 00000 eee ee 99 4 7 1 2 OsiriX Workstations 0 000000 99 47 2 Conclusion tebe ae we ae a Ha oy He Ee Ae ee 100 5 The 2D Viewer 103 5 1 The Anatomy of the 2D
6. 2 2 0 0 0 33 2 3 1 8 Unreadable Files 34 2 3 1 9 Activate OsiriX database sharing 34 2310 Bonjour a RE pubs 34 2 3 1 11 Incoming and Outcoming files are linked to the de fault database 34 23 14 12 Anony mization a 200 ida tt dd 34 2 3 1 13 DICOM Network Events Logs 34 2 3 1 14 Server Mode 0 00 ee eee eee 35 2 31 15 C GET SCP ii noes iia eee SO Ae hs es 35 2 3 1 16 XML RPC Server 2 00000 ee eee 35 23 2 TeOCatiONs 3 lt i3 205 2 ada ode by Be hb Sb 35 2 3 2 1 DICOM Nodes DICOM Q amp R and DICOM Send 35 2 3 2 2 Shared OsiriX Databases 38 2 3 2 3 Local OsiriX Databases 38 23 9 ARQU DY saent aaa a a h ter ag Sue se eek dg ee aM Bike 38 2 34 DICOMPrint 0 0 0 000000 ee ee ee 40 2 3 55 WebServer o 40 3 Database 43 3 1 The Database Window 43 Sill E A A Ba Goce See a inn wanda i wet De acts 44 SAA 2D Viewer A A Ae a wa es dh ee Ad 44 Sb AD Mie Wer oe OR ane ally BS te Bae esa Gh oes oe 45 3 1 1 3 Album amp Sources 0 00000 eee ee 45 SALA AAMONYMUZE tt Ai 45 JLLS BUFR s i asi se patra Soe esac te Ab Sete tek WR ee hes ed 45 S116 CD ROM inicios ee we oe BA ee 46 LAR Deletes cosita bee PE Me ab da ae GL Es 46 SAB MEXPOTE sorte te WAS os BES Aye elas Pe eho 46 LLE ADS Gets ia ra EPR e es 46 viii CONTENTS 3 1 1 10 iDiskSendd
7. B 4 3 Augmented and Private Profiles B 5 Support for Extended Character Sets B 4 1 C Lexicon Bibliography Index B 3 3 2 Additional Protocols B 3 4 Configuration AE Title Presentation Address Mapping CONTENTS
8. Network Logs nip 62 24 den 0 bs ae tegen sa dads 232 The Edit Men vias a ote Soe Sted Beare A Rs 232 BAL MONO aci eo kes pe each hed E Se hee howe ate we 232 RBA Red eo sie Soke Mena oi RR a A eh ds eh ae 232 1334337 CUB os ek i ye aie eg ea RA aE el RE ee 233 134 sit Bae whist ne amp doce PM Hen Bae ange Sas B deed ge 233 134 5 Paste is it a ane ae dee bt Ra eae aoe E AA 233 EF KAR E E 2 i156 03 Sy Bia IA O 233 1347 Select Al tye es ie ges Mel ASR SOR A Ee a de 233 The Format Menu 0 0 0 eee a 233 13 5 1 Customize Toolbar 233 139 2 gt Fullsere nis mam rea Sold Pu a bese a el ae BS 233 BSSP a ei ER ale Ae G Othe ba Mile ahd 233 13 5 3 1 Show Fonts o 233 135 32 Bold ere mis as al se Ra Bw 233 13 533 Mali aci a BO oe ed 234 13 5 3 4 Bigger date e io E 234 18535 lt Smaller s riores ds a ek BR es 234 ANN A Ped ee ln orb le i E 234 13 35 37 ligature o 5 uti a RS 234 13 5 3 8 Baseline 2 2 00 eee ee ee es 234 13 5 3 9 Show Colors 234 The 2D Viewer Mena 235 13 6 1 Nextserlesa tir nd a a a ees 235 13 6 2 Previous Series saari r iey p di ee G 235 13 6 3 Convert Between BW RGB 236 13 6 4 Reset Image View o o ooo 236 13 6 5 Revereseries sa i 426 28 a a a A 236 13 6 6 Sort DY eto wares as des eg a ee ey 236 13 6 7 gt Orientations bo ms a eae A ARG ee eds 236 13 6 7 1 Flip Image Horizontal o o
9. 3 Cross reference lines 0 000 eee eee ee 209 1024 Thick Sabio a a See pe aS 209 10 2 5 Image FUSION o A A a Gee an 210 10 2 6 4D Dataset o o sr ee ee bs 210 1027 ROS ia nd a Seti ita a il 211 10 3 Exporting MPR Images o 211 10 3 1 Exporting QuickTime Movies o ooo o 212 11 The 2D Orthogonal MPR 213 11 1 The Anatomy of the 2D Orthogonal MPR Viewer 213 TELL Toolbar tia o A Mae A E aes 213 TELLI WWW e a a a aia pb 213 AR A A A 213 TETIS Opacity cio ai epa Gee o ae a 214 11 1 1 4 ThickSlab 2 2 0 0 0 00 0 000 000048 214 HILS PAD Player nto a aad ea afta A 214 11 1 1 6 Mouse button function 214 11 1 1 7 Save as DICOM 215 Hes Emails 105 Zo hee o ds eK 215 11 1 1 9 Same widths heights 215 TVD IO Reset oia a p oy AG Se he ene a a bes a a 215 T1111 Flip Volume ooo oe Bare eae ey 216 11 1 1 12 3D Pa el 2 S04 bl ar da 216 TRILI FUSION ee tas a ok he a Ge BS IS ie hae a Wd 216 CONTENTS 11 1 1 14 3D P 08 00 dd a a aa 11 2 2D Orthogonal MPR Viewing Functions ooo oo 11 2 1 2D Orthogonal MPR Engine ooo oo 11 2 2 Cross reference lines 11 23 HICK Slabio ii do a e dalt sal Od ob 11 24 Image FUSION nk a Deke epee eee pa 1125 4D Dataset seada sa ra a VUELO AROS 2d ar ete aes E a dis 11 3 Exporting MPR Images oo 11 3 1 Exporting
10. QuickTime Movies o o ooooo oo o o 12 The 2D Curved MPR 12 0 2 Curved MPR Engine iae ra bar oo ooo o 12 0 3 Curved MPR in a single plane ooo ooo oo 12 0 4 Curved MPR in multiple images ooo ooo 120 5 Image Fusion g iaia e o iba 12 06 AD Dataset d noe enaa a ia ake aaa 13 The Menus 13 1 The siriX Menu ii 6 a A o A ee dd ISLI About OsitiX ss tiae a e rr de das lab 13 1 2 Preferences ss a A a oh aaa 13 1 3 gt Check for Updates s siasi ia Bo ted Mee 13 1 4 Hide OsitiX 13 15 Hide Others aaa eee 13 1 6 Quit OSiflX 2 hoe pa hee ear EE OR Bee we 13 2 The File Mena 13 2 1 Show Database Window 13 2 2 New Database Folder 13 2 3 Open Database Folder o o o oooooo ooo oo 13 2 4 Report A Osha Deh e E pede aha 132421 Open Report os ac ig osa eal hae do de ee a arty 13 2 4 2 DeleteReport 00 0000 oo 13 2 5 IM pOrt 3 od kas ee BS ae ee lS ra 13 25 1 Import Files is a cise Ak Gah sO Sg de 13 2 5 2 Import Image from URL o oooooo 13 2 5 3 Import Raw Data oo 13 26 Export at gts goblet eta cache O IA Ue Mh og 13 2 6 1 Export to DICOM Network Node 13 2 6 2 Export to QuickTime ooo ooooo oo 13 2 6 3 Export to QuickTime VR o o o ooo ooo 13 2 6 4 Exportto JPEG o cion LA ee be 13 2 6 5 Export t
11. Signed Certificate o o o ooo oooooo o 260 AA Requesting a Certificate from a Certification Authority 266 AA 1 Real world example o o oooooooooo omo 269 A 5 Changing the Trust Settings of a Certificate 277 B DICOM Conformance Statement 281 B 1 Conformance Statement Overview 281 B 1 1 Image Waveform Measurements and Reports Transfer Storing 281 B 1 2 Query Retrieve ita o aa o 282 B 1 3 Print Management 282 B 1 4 Media Services 282 B 2 Introduction gaine e a a eee 282 B 2 1 Audience cn oS id a he Re Ee s 282 Bids Networking n siia 4 cub yf ds e ke dds AS A Mead ae 283 B 3 1 Implementation Model 0 00000000 283 B 3 1 1 Application Data Flow o o 283 B 3 1 2 Functional Definition of Application Entities 283 B 3 1 3 Sequencing of Real World Activities 284 B 3 2 AE Specifications ss cepto eat Sse erga jac de paisa ias 285 B321 Store SCU mocos id da dai 285 B 3 2 2 StoresSCR e tica 3 Gade A a da ays ds 287 B 3 2 30 Pint SCU an IT ARA ASS 290 B 3 2 4 Find SCU Get SCU Move SCU 290 B 3 25 Find SCP Get SCP Move SCP 294 B 3 3 Network Interfaces a 297 B 3 3 1 Physical Network Interfaces 297 XX B 4 Media Storage Implementation Model B 4 2 AE Specifications OsiriX Media Exporter OsiriX Media Importer
12. na Da he eet Gee ad ade 133 5 5 13 Shutter To0l 134 5 5 14 Convolution Filters 134 5 5 14 1 Smoothing amp Blurring Filters 136 5 5 14 2 Sharping Filters o ooo ooo o 139 5 5 14 3 Edges Detection Filters o o 140 5 5 14 4 Embossing Filters o o 142 5 5 15 Using a 12 bit Totoku Monitor o o ooooooooo o 144 Quantification Tools o o o o ooo 144 DOT TASRO S ec e cd o ds BAS PEI des 144 5 6 11 Length ROL occiso we hh ad 145 5 6 1 2 Angle ROL camisa weds Ok i E 145 5 6 1 3 Rectangle ROD soss eads a de cee eae 145 5 6 1 4 OvalROI 0 0 00000 eee 145 5 6515 gt Ted ROL Sraa el Ra ecole aa E ele Baas 146 5 6 1 6 Arrow ROI 146 5 6 1 7 Closed PolygonROl o o ooooomoo o o 146 5 6 1 8 Opened Polygon ROI o ooooooocoo o o 146 5619 Pencil ROT ah Yo ee a Ba E ee 146 5 6 1 10 PointROI 147 5 6 1 11 BrushROI 0 2 000 000 ee eee 147 5 6 412 Ads ROL ca ae ee god er pe doe cs tad agp ter HAY Bryce 147 5 6 1 13 Dynamic Angle ROT 2 0 2 0 00000005 147 5 6 1 14 Repulsor Tool 2 2 0 eee eee 147 5 6 1 15 ROI Selector Tool 0 2 0 000008 148 5 6 1 16 ROIInfo Box 148 5 6 1 17 ROI Info Panel 149 6118 ROLNAMINE Ae oe A ii 150 5 6 1
13. 19 ROI selection 150 5 6 1 20 ROldeletion 151 5 6 1 21 ROI Spline Rendering o o oooooooo 151 5 6 1 22 3D ROIs and Volume 151 5 6 1 23 Angle of Cobb o oo ooooo momo 152 9 6 2 Regi n Growing dre ed o ace ae a 154 5 6 3 Set Pixels Values eee ee 155 504 SUV O ae hee oh QO te RB eas 156 5 7 Reconstruction Tools ee 159 CONTENTS 7 3 2 Exporting QuickTime VR Movies o ooo 8 The 3D Surface Rendering 8 1 The Anatomy of the SR Viewer o o ooo oooo Toolbar 2d ais te 8 1 1 8 2 1 8 2 2 8 2 3 8 2 4 8 2 5 8 2 6 8 2 7 8 1 1 1 8 1 1 2 8 1 1 3 8 1 1 4 8 1 1 5 8 1 1 6 8 1 1 7 8 1 1 8 8 1 1 9 Surface Settings asci n ated e A Fusion Surface Settings aoaaa Stereo aaa a al Bab a id ai E lata e Orientation Cube Movie Exports tino as E ai O er Ree te RY E EXportQ EV Riek ay 8 amp Pa ob te eae See ee hee t Exports DSR Je a 2 2 Wee wee bbb dd tele 2G Orientations bid Be ee ee AS ORS A a 8 1 1 10 Mouse button function 048 STAT ROU Manager atsk di ety reel shee a 8 1 1 12 Fly Through sess aie SS ate late ee al Hae 8 1 1 13 Show Hide 3D Points 0 S114 Perspective oca bic bai ee ie oe tee 8151 15 Reset soa seek ei BS eA Re ee ias 8 1 1 16 SaveasDICOM 00000008 8 1 1 17 Background Color
14. 42 13 6 38 Windows Tilidg_ o ooooooo ooo o o 242 13 6 39 Save Workspace State o ooo ooo o 242 13 6 40 Load Workspace State o o o oooooooooco o 242 13 6 41 Reset Workspace State o o ooo ooo eee 242 13 7 The 3D Viewer Menu 243 xviii CONTENTS BAL IDMBR va ma due sd A a a 243 13 7 2 2D Curved MPR 243 13 7 3 2D Orthogonal MPR o o o oooooooocooo o 243 13 74 3DMIP oia ais Ge e e aaea Ea Ew o 243 13 7 5 3D Volume Rendering noaa aaa 244 13 7 6 3D Surface Renderings i cp o day yT es 244 13 7 7 8D Endoscopy io eo Cee a det 244 13 7 8 Reset to initial view 244 1379 ReverESeries pu asair tks Sob da de BS a Re a pE 244 13 7 10 Coronal View 244 13 7 11 Left Sagittal View o n naaa aa 244 13 7 12 Right Sagittal View 2 2 ee 244 1377 13 Axial VIEW pee reer gasa a ee ee E a 245 13 7 14 Add FlyThru Point s seee dene taat ion sa eee eee 245 13 7 15 Remove FlyThru Point 2 0 0 0 eee eee 245 13 7 16 Reset FlyThru Path 2 00 eee eee 245 13 7 17 Scissor Editing es 245 13 7 18 Select 3D Preset ee eee 245 13 7 19 Save current State as 3D Preset 245 13 8 The ROI Menu ooann aaa eee 246 13 8 1 Import ROI s oaaae 246 13 8 2 Save Selected ROI s ooo naaa 246 13 8 3 Save All ROIs of this Series 246 13 8 4 Delete All ROIs in this Seri
15. 6 Unlock Selected ROIs o 248 13 8 27 Make Selected ROIs Unselectable 248 13 8 28 Make All ROIs Selectable a 248 CONTENTS xix 13 8 29 Set Pixel Value to ee ee 248 13 8 30 Grow Region 2D 3D Segmentati0M o o 249 13 8 31 Brush ROIS s irn eaan il it eee EAR Bee ios 249 13 9 The Plugins Menu init oia e oh Boe ne io A 249 139 1 Image Filters oiae n wyol d angie ogg tel pd ob 249 13 92 ROU TOOLS i us A woe ye avd ee SUR SA ete Oe 249 13 09 35 Othersi an Lada be pie dh ts Ba ME Be Sich or GA den dt odd a des 250 139 4 Databases s 05 0 ed de Sk da ee be ks 250 13 9 5 Plugins Manager 2 setiya cuni sosi says es ole d ta a a 250 13 10The Window Menu 2 2 0 0 a 250 13 10 1 Minimize aair ana a a a ee ee 250 13 10 2 Resize Window 250 13 10 3 Tile Windows 250 13 10 4 Close All Viewers a 250 13 105 Bring All to Front o p ARG 250 13 11 The Help Menu ii A ed 251 AS TA Search ta a a Sana ele 251 13 112 Email Project Lead n iasi se eas Go te wad a 251 13 11 3 OsiriX Web site a 251 13 11 4 OsiriX Discussion Group 6 o 251 13 11 5 OsitiX Help i aeieea Se eh Pee ae es Dah OS 251 A Security 253 AN IDICOMITES oian g e A a Si A 253 A 1 1 Authentication 253 A 1 2 OsiriX TLS DICOM Listener Setup o ooo 253 A 2 OsiriX Secure Web Server Setup o ooo ooooo mmm 257 A 3 Creating a Self
16. ID 63 Sd CAND UIs IO ea Gene ies Berek as 64 3 4 Managing multiple databases o ooo ooooo o o 64 3 4 1 Exchanging studies between database 64 3 0 Reports scp A e a ee aA 65 3 9 1 Report Template oia o et a ee Se og ee 66 39 27 Report Archiving se 20 24 06 as oe Sh Gb ae Ee 34 os 67 3 5 3 Report Sharing ssi ska eas darepada Sa ee eee be 67 Sado DICOM SR 2 a ah Soe Se He a L N 67 Communications 69 41 G neral Concepts ia a A IA 69 4 1 1 Importing and Receiving Data o o 69 4 12 Sending Data SAA Bad 69 41 3 Sharing Data snes ra po eis a 70 4 2 DICOM Communications 71 4 2 1 Introduction 0 0 0 0 a 71 4 2 2 DICOM Protocols o 71 4 2 2 1 Store Service Class Provider C STORE SCP DI COM Listener evisos Re o E 72 4 2 2 2 Store Service Class User C STORE SCU DICOM Senn hie Sette aw ects one Echo dd Oh Seca da 73 4 2 2 3 Find Service Class Provider C FIND SCP 73 4 2 24 Find Service Class User C FIND SCU 74 CONTENTS ix 4 2 2 5 Move Service Class Provider C MOVESCP 75 4 2 2 6 Move Service Class User C MOVE SCU 75 4 2 2 7 Get Service Class Provider C GET SCP 76 4 2 2 8 Get Service Class User C GETSCU 76 4 2 2 9 Print Service Class User C PRINT SCU 77 4 2 3 DICOM Listener 77 4 2 4 DICOM Nodes 0 000 eee ee eee 78 4 2 5 Query amp Retrieve
17. O a a a Ew gs 107 SLAB 1 RGB BACtOrs iy 8 Se ee SO LE ie BORE de 107 5 11 32 ROL Managers oi 5 bho oe ee ee eee as 108 5 1 1 33 Save as DICOM 2 00000 ee eee 108 DELBA Send i goals Sk So dee gp dls SS oe eV es 108 51 135 Series sso ade bokeh ote bee Bb Rias e os 108 5 1 1 36 SetPixels 108 5 12 37 Sh ttet saca aa 108 5 1 1 38 Status amp Comments 108 5 1 1 39 Subtraction sq so pse ii e e ca is 108 5 1 1 40 SUV cg Sect de dit tt es 108 DA AL Syne ci a Gee Bos 108 511427 Thick Slab arere a Oks ed A Ne ed 109 PAS AAA AN 109 5 1 1 44 WL WW CLUT amp Opacity o o ooo o 109 Displaying images 3 2 0 0 2 ne te ea ek ds 109 5 2 1 Displayingaseries 1 0 eee 109 5 2 1 1 Propagate Settings In a Series 109 5 2 2 Displaying multiple series o o oooo oo ooo o 110 5 2 2 1 Tiling amp Magnetic Windows 110 5 2 2 2 Propagate Settings oo oo oooo 110 5 2 2 3 Synchronization ps osa ooo ooo o 111 5 2 2 4 Reference Lines 111 Navigating between Studies and Series o ooo ooo o 112 5 3 1 Switching image series o ooo oooooo omo o 112 5 3 2 Switching patients mo teos T om 112 5 3 3 Switching back to database browser o o o 113 5 3 4 The Preview list 113 Workflow sior rta si BO Eee ee ce I a es 114 5 4 1 Work
18. Viewer 2 0 0 000 ee eee 103 Bab Toolbar a ee a a ape cid 103 5 1 1 1 2D 3D Button 103 52s 3D Panelen iii lo de OR hee as 104 513 BD Position esoo cd rra ia a ee e 104 SELA ADD is Peter a a ES A 104 DELS BTOWSe lt i aa oS Bae ads a eels GG 104 STO Cobb Angle cocidas Ds A id 104 5 1 1 7 Convolution Filters 104 SELS Database oido ic a ph ect Ma 104 KLOI Delete oa a a et ae ase al aoa tee 104 SELIO Emails ca aa Daz ok Gate Sains alle toa eG 104 SELIL Blip mraos eanan a n vane Sie tester ig Se days 104 5 1 1 12 Flip Horizontal 2 0 0 00 0000000 105 or 1 13 Flip Vertical osito toe en Pte eae Eo 105 BATA Fusion 4 4 eagar A eb ds ae LE Es 105 DATS GTO WINS cc Pete a 105 Dl V6 Chats ts eee goon eR Md as 105 5 2 5 3 5 4 5 5 CONTENTS E RN Rees 105 SAAS Key Images o ccoo ici ec aa 105 5 1 1 19 Meta Data o 105 5 1 1 20 Mouse button function 106 5 11 21 Movie EX port s ag 254 ALeeeeh op io 106 51122 Navigatori is ey ES We Bes Se 106 5 1 1 23 Orientation o 107 5 b124 Patient sc bead ate denn aha fe ae ed ed os 107 BPP 25 SP rite wad eo oe aE ee aye dda oe Bek Woke was Ae ones OS 107 5 1 1 26 Propagate 2 e pes bist nda A ae ee 107 BAZA Rateta Dd A sets aa bean a RGA 107 D128 Reports se ii A ls ta aa 107 51129 Reset iu a ii fe a e e a 107 5 11 30 Reyert ed a ee de a o B
19. es o 246 13 8 5 Delete All ROIs with Same Name as Selected ROI 246 13 8 6 Select All ROIs in this Series 246 13 8 7 Deselect All ROIs in this Series 247 13 8 8 ROL managers 2 oe ge arias e a e 247 13 89 ROLIN olaa a a pts a a a 247 13 8 10 ROI Rename 247 13 8 11 Set Default ROI Name 247 13 8 12 Display Info Only when ROI Selected 247 13 8 13 Display Name Only 0oo o o ooo omo 247 13 8 14 Increase Thickness 247 13 8 15 Decrease Thickness 247 13 8 16 Increase Font Size ee 247 13 8 17 Decrease Font Size ee ee 247 13 8 18 Histogram of Selected ROL 2 0 eee ee eee 247 13 8 19 Create Layer from Selected ROL o o o ooo ooo 247 13 8 20 ROI Volume 247 13 8 20 1 Compute Volume 2 0 0 0 ee oo 247 13 8 20 2 Generate Missing ROIs 248 13 8 20 3 Delete Generated ROIs 248 13 8 20 4 Erase content 248 13 8 20 5 Restore content 248 13 8 21 Propagate Selected ROL o o oooommocooo ooo 248 13 8 22 Propagate Selected ROI to current Thick Slab 248 13 8 23 Group Selected ROIs o o o ooooooooooo oo 248 13 8 24 Ungroup Selected ROIs o o o oooooooo ooo 248 13 8 25 Lock Selected ROIS o 248 13 8 2
20. o Raw o o oo o 13 2 6 6 Exportto TIFF 13 2 6 7 Export to DICOM file s lt 13 2 6 8 Exportto Emails s era deurei eo ist ij 13 2 6 9 Export to iPhoto i 2 Pe io e aa 13 2 6 10 Exportto0 iDisk 2 vii ral rat hen oo 13 2 6 11 Export Displayed Database Listas 1327 A A A A 13 2 8 gt ANONYMIZER sta cada os iia 13 2 9 Copy Linked Files to Database folder 1325110 Search sn al en a ao AMEE a Ba XV xvi 13 3 13 4 13 5 13 6 CONTENTS 13 2 11 Merge Selected Study o o o ooo oooooooo o 230 13 2 12 Delete Selected Exam 230 13 2 13 Compress selected DICOM in JPEG o o o ooo 230 13 2 14 Decompress selected DICOM ooo ommooo o ooo 230 13 2 15 Rebuild Entire Database 230 13 2 16 Rebuild SOL Index File 230 13 2 17 Rebuild Selected Thumbnails 230 13 2 18 Close Window 230 13 2 19 Rage Setups sil Leto as e a dr rd wan ery ds 231 EAN AAN Pe eh ele ae i OR Se th nes 231 13 2 21 DICOM Print 231 The Network Mena 231 13 3 0 1 Export to DICOM Network Node 231 13 31 Query Retrieve so 624 ees e Rie Agden Hee Hal Ee os 231 13 3 2 Query Retrieve Selected Patient 232 13 3 3 Auto Query Retrieve 2 6 eee 232 13 3 4 Abort Incoming DICOM Processes Store SCU 232 133 0
21. o o ooo 236 13 6 7 2 Flip Image Vertical 2 2 2 0 0 0 ooo o 236 13 6 7 3 Rotation 0 degrees o o ooo o 236 13 6 7 4 Rotation 90 degrees o ooo ooo oo o o 236 13 6 7 5 Rotation 180 degrees ooo oo 236 13 6 8 Calibrate resolution 236 CONTENTS xvii 13 6 9 3D Position Panel 237 13 6 10 Navigator Panel o o o oooooo comme 237 T3611 Flip Series s z urs eaa a a A Ba id ia 238 13 6 12 Use VOI LUT if Available 238 13 6 13 Display DICOM Overlays o o oooooooooo o 238 13 6 14 DICOM Meta Data o 238 13 6 15 Fuse De Fuse PET SPECT CT 238 13 6 16 Flatten Fused Image o ooo oooooro o 238 13 6 17 Broadcast Viewer via iChat 238 13 6 18 Propagate settings between series o o o oo ooo 238 13 6 19 Don t propagate WL WW between series 238 13 6 20 Propagate settings in current series 239 13 6 21 Sync Series same study 2 ee ee 239 13 6 22 Sync Series different studies at current position 239 13 6 23 Key Imap enten oboe Pte elu te RY ee ed SPE Ah es 239 13 6 24 Mark All Images as Key Images o o oo oo oo 239 13 6 25 Unmark All Images as Key Images o o o oo 239 13 6 26 Mark All ROIs Images as Key Images 239 13 6 27 Find Next Key Image 6 2
22. r Engine 6 2 ee ee 9 2 2 Cross reference lines xiii xiv CONTENTS 9 237 Image Fusions ci a He 201 924 Al Dataset secin ars oak a A aires SAE 201 9 25 ROIS ey edie SS RA eee RA Ba RL ha ee a 201 9 2 6 Path Assistant o 201 9 3 Exporting MPRImages isde p ipea iea ee 202 10 The 3D MPR 203 10 1 The Anatomy of the 3D MPR Viewer 2 0 0 5 00000500 203 10 11 Toolbar socorrista A E N 203 10 1 1 1 Mouse Tools 0 02 00 ee eee 204 104124 WLS WW a tae ee a A Bee BAG OR ae See eee Ge 204 LR GUT ies oe E BeOS ae 204 10 1 1 4 Opacity o pave les Leah deed 204 10 1 1 Level of DetailS 204 10 1 1 6 Best Rendering o ooo o 205 IOLE Thick Slabi 3 ecg sess RK ts da ae 205 101 1 8 Fusioa ie Bt 8 esl ace Mig de bo hab Baa ak 205 AAA PAE OR Ao a ee 205 10 11 10 4D Player miii did ge ee rie e 205 10 11 11 Reset asec cae ee e Be ne ew Fe ew PE a wl a ee 206 10 1 1 12 Save as DICOM 0000002 ae 206 10 1 1 13 Movie Export 000 207 10 1 1 14 Axis Colors 4 2 5 where Ao ed 207 TOM DAD ANS hs Bo os a da BM aa Sion aye 207 10 1 1 16 Mouse Position 0 00002 eee eee 207 10 1117 Syne ZOOM cr hae ents ta ee Ae a okay ht 207 10 2 3D MPR Viewing Functions 2 2 2 2 2 ee 208 10 21 3D MPR Engine ssie gai ia eda da ae 208 10 2 2 Plane Position o ces so ra sac hE ewe a ww D 209 10 2
23. space tt Melee Sata Pee o Weis hee eas 114 5 427 Key Images ii pe oad ae See Soa ae A ee Bo 115 FA Printing sy 155 54 ede LRA DOR Ea deed ble SPA 115 544 O Batre ee Ok a ee es 116 5465 ICRA secs 6 bodes Sl oA sade e Aa at oe SLs 117 5 4 6 Magnifying Lens 0 0 0 2 ee ee 118 5 47 Image Export s4 si satis ea ee ewe be a eed Ee eh es EA 119 9 4 8 SMovie Export 2 uss stg oN a ee a Re ee eS 120 5 4 9 DICOM Secondary Captures o momo 121 Viewing Tools a tare a PO A Pate lA lee Bae Peed 123 55 1 Mouse Tools muros a 123 CONTENTS 5 6 xi 5 5 1 1 Window Level amp Width Tool 123 55 12 Pan Tola ds a he a Se eas al 123 5 5 1 3 Zoom Tool e srs ema 0 00000 ee ee 123 5 5 1 4 Rotate Tool ooc oo oooocreso es 123 551 5 Scroll Tool inged ii eo ed hs ae el es PE Ss 123 5 5 2 Window Level amp Width 124 5 5 3 Color Look Up Table 6 0 0 0 e eee eee ee 124 p04 Opacity edie ees Ath Be deck oe de a 126 5 5 5 Thick AA Sees Phe 3 hae Seka He Pa tes eed amp tok PY dys 126 5 5 6 Orientation 2 0 0 ee ee 127 5 9 7 Navigator on cra ag ety gals ae esha a alee 127 5 5 8 Image Subtraction 1 ee 128 929 95 Image PUSO st otek Ab hoe Seite o yatta ene oe Ela 129 5 5 9 1 3DPosition e 131 5 0 10 Series Registration gietas bop Pe Ee ES OES OR ee 132 5 5 11 Image Stitchings posh ari bs betes bee ied Sas 132 5 5 12 Annotations aca
24. tabase Auto Cleaning 4 19 2A2 8 GRePOrS oia Bk alee OH BU oats aea 19 213 CD DVD i Steck och sey Siva ag Wate ae Gece Gl anes Wag bo ec es an sa 19 2 1 4 Protocols ui car we ee a ee os 20 2 2 DISPLAY yee aa Fe eae hee ae ek ea Ee Aa ee aes 22 221 VIEWS 0 5 ook o Ped bbe SG Los 22 2 2 1 1 TIFF JPEG QuickTime DICOM Export 22 vi CONTENTS vii 2 2 1 2 Screens amp Window size 23 2 2 1 3 Miscellaneous 0 0000 eee eee 23 222 BD ta Sop Gey dla eae Heche aA Deis ORS Bae tee He des 25 2 2 2 1 Best Rendering Button ooo o 25 2 2 2 2 Default View Size 26 DDD INM A De eb Ae bi 26 ES A II AI AA 26 SS AA A E we dk ds 26 2 2 3 2 Opacity Table s ort ges ls end ee wea gd 26 2 2 3 3 Mouse Windowing Mode 5 26 2 2 3 4 Window Level amp Width 27 2 20 07 Fusion Types ah Gate ie cea te y eS 28 22At HOBKCYS Si a ia ia amt ene es trae 28 22 5 Annotations tear 8605 de eA OE OR eR ee d 30 223 Sharing besa ahve he ais tie adhe ES e 31 Za Steed sd Bet 31 23 11 Basic Settings eos a da 31 2 3 1 2 MacOSX User Session 33 2 3 1 3 DICOM Multi Threading 33 2 3 1 4 DICOM Communications Time out 33 2 3 1 5 DICOM TLS Listener 33 2 3 1 6 Incoming Files Indexing Interval 33 2 3 1 7 Filecompression
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