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6047R-E1R24L

1. JBOD OU downstream port 6 14 Chapter 6 Advanced Chassis Setup Notes 6 15 Chapter 7 BIOS Chapter 7 BIOS Introduction This chapter describes the AMI BIOS Setup utility for the X9DRD 7LNAF It also provides the instructions on how to navigate the AMI BIOS Setup utility screens The AMI ROM BIOS is stored in a Flash EEPROM and can be easily updated Starting BIOS Setup Utility To enter the AMI BIOS Setup utility screens press the lt Del gt key while the system is booting up Note In most cases the lt Del gt key is used to invoke the AMI BIOS setup screen There are a few cases when other keys are used such as F3 F4 etc Each main BIOS menu option is described in this manual The Main BIOS setup menu screen has two main frames The left frame displays all the options that can be configured Grayed out options cannot be configured Options in blue can be configured by the user The right frame displays the key legend Above the key legend is an area reserved for informational text When an option is selected in the left frame it is highlighted in white Often informational text will accompany it Note The AMI BIOS has default informational messages built in The manufacturer retains the option to include omit or change any of these informational messages The AMI BIOS Setup util
2. Notes Jumpers not indicated are for test purposes only The SSG 6047R E1R24L comes pre installed with a JBOD expansion port installed in PCI E slot 1 Please note that the PCI slots are enabled when their corresponding processors are installed CPU2 Slot 4 indicates that the second CPU must be installed in the CPU2 socket to enable this PCI slot 5 15 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual X9DRD 7LN4F JBOD Quick Reference Jumper Description Default Setting JBT1 Clear CMOS See Section 5 9 JPC1 JPC2 SMB to PCI E Slots Pins 2 3 Normal JPB1 BMC Enable Disbable Pins 1 2 Enabled JPG1 VGA Enable Disable Pins 1 2 Enabled JPL1 GLAN1 GLAN2 Enable Disable Pins 1 2 Enabled JPS1 SAS Enabled Pins 1 2 Enabled JWD1 Watch Dog Pins 1 2 Reset Connector Description COM1 COM2 Backplane COM Port1 Front Accessible COM2 Header FAN1 8 CPU System Fan Headers IPMI LAN Dedicated IPMI LAN port I SATA 1 6 Intel SATA Ports 0 5 JD1 Speaker Power LED Indicator JF1 Front Panel Control Header JF2 LAN3 NIC3 LAN4 NIC4 LED Headers JIPMB1 4 pin External BMC I C Header for an IPMI Card JPI C1 System Management SMBbus C Header JL1 Chassis Intrusion JOH1 Overheat Fan Fail LED JPW1 ATX 24 Pin Power Connector JPW2 JPW3 12V 8 Pin Power Connectors JPW4 12V 4 Pin Power Connector JSD1 SATA DOM Device On Module Power Connector JSTBY1 Standby Header JTPM1 TPM Trusted Platform Module Port 80 JUID UID
3. 1 1 OVENVICW E 1 1 1 2 Serverboard Features ssssssssssssssssssseseeeneenee enne 1 2 Processors Mea PTRA Cp P ER Sanal ATA M PCI Expansion Slots 153 Server Chassis Features aii terit e itr EE eae 1 3 System POW E 5 erret e e pL e Ft il t tds 1 3 Hard DIVES o c octies rure item Euuf t cages 1 3 Front Control Panel zm ioi ee E ire ToO 1 3 Cooling System mte pce a pen a dE EEE 1 3 1 4 Contacting SupetrmlGtO cene et erret te Dra eed dp dece 1 6 Chapter 2 Server Installation 2 1 OVOFVIO WS comes cuire ire A Gs E ene EIE rade ETE SERA rer MERE 2 1 2 2 Unpacking the System irte emm aci ee T ere tH 2 1 2 3 Preparing for SOUP wisscassseccssciscecossstecencacentenzenacsenscuversasaes eri n erbe x enr ERES 2 1 Ghoosing a Setup Localtiori rer ertet Aad beeen 2 1 Rack Precautioris erre rire teeth tbe pe pun nita I RR EYNRR eR RR ARE DRa Ria Da Server Precautions 1 Rack Mounting Considerations Ambient Operating Temperature eene FROCUI COONAN OW E Mechanical LOading nr rrr re mere Circuit Overloading s coc fret t tr cie rt eee te pte Reliable Ground sseni miniere perdite C OR coal dp dps 2 4 Rack Mounting Instructions seeeeseeeseeneeneeenneeeneeennnnns Rack Rails As
4. 1 Data 2 Ground 3 Clock 4 No Connection Standby PWR Pin Definitions Pin Definition 10 5V Standby Ground Wake up LAN Ports 3 4 LED Indicators JF2 Pin Definitions 1 LANA Activity 3 LAN3 Activity Pin Definition Pin 2 LAN4 Link 4 LAN3 Link PWR SMBus Header Pin Definitions Pin Definition 1 Clock 2 Data 3 PWRFail 4 Ground 5 3 3V SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Unit Identifier Switch UID Switch The UID Switch is located next to the Pin Definition LAN 2 4 ports on the backplane The 1 Ground Rear UID LED LE2 is located next 2 Ground to the UID switch The control panel 3 Button In UID LED connection is on pins 7 8 of 4 Ground JF1 Connect a cable to pin 8 on JF1 for Front Panel UID LED indication m When you press the UID switch both the rear UID LED and control panel UID LED indicators will be turned on i Blue Linux OS Unit Identified Press the UID switch again to turn off Blinking both LED Indicators These indicators provide easy identification of a system unit that may be in need of service Color State OS Status Blue On Windows OS Unit Identified Note UID can also be triggered via IPMI For more information on IPMI please refer to the IPMI User s Guide posted on our Website http www supermicro com TPM Port 80 Header Pi
5. If you buy a CPU separately make sure that you use an Intel certified multi directional heatsink only Make sure to install the serverboard into the chassis before you install the CPU heatsinks When receiving a serverboard without a processor pre installed make sure that the plastic CPU socket cap is in place and none of the socket pins are bent otherwise contact your retailer immediately Refer to the Supermicro web site for updates on CPU support Installing an LGA2011 Processor Press down on the lever labeled Close 1st There are two levers on the LGA2011 socket First press and release the load lever labeled Open 1st Press the second load lever labeled Close 1st to release the load plate from its locked position Pull lever away from the socket 5 4 Chapter 5 Advanced Serverboard Setup 3 With the lever labeled Close 1st fully retracted gently push down on the Open 1st lever to open the load plate Lift the load plate to open it completely Gently push down to pop the load plate open 4 Using your thumb and the index finger remove the WARNING plastic cap from the socket 5 Use your thumb and index finger to hold the CPU by its edges Align the CPU keys which are semi circle cutouts against the socket keys 6 Once they are aligned carefully lower the CPU straight down into the socket Do not drop the CPU on the socket Do not move the CPU horizonta
6. Manual Revision 1 0 Release Date September 26 2012 Unless you request and receive written permission from Super Micro Computer Inc you may not copy any part of this document Information in this document is subject to change without notice Other products and companies referred to herein are trademarks or registered trademarks of their respective companies or mark holders Copyright 2012 by Super Micro Computer Inc All rights reserved Printed in the United States of America Preface Preface About This Manual This manual is written for professional system integrators and PC technicians It provides information for the installation and use of the 6047R E1R24L Installation and maintainance should be performed by experienced technicians only The 6047R E1R24L is a high end storage system based on the SC846E16 R920B 4U rackmountable chassis and the X9DRD 7LN4F JBOD dual processor serverboard Manual Organization Chapter 1 Introduction The first chapter provides a checklist of the main components included with the system and describes the main features of the X9DRD 7LN4F JBOD serverboard and the SC846E16 R920B chassis Chapter 2 Server Installation This chapter describes the steps necessary to install the 6047R E1R24L into a rack and check out the server configuration prior to powering up the system If your server was ordered without processor and memory components this chapter will refer you to the appropr
7. Operating Environment Operating Temperature 10 to 35 C 32 to 95 F Non operating Temperature 40 to 70 C 40 to 158 F Operating Relative Humidity 20 to 95 non condensing Non operating Relative Humidity 5 to 95 non condensing Regulatory Compliance Appendix B System Specifications Electromagnetic Emissions FCC Class A EN 55022 Class A EN 61000 3 2 3 3 CISPR 22 Class A Electromagnetic Immunity EN 55024 CISPR 24 EN 61000 4 2 EN 61000 4 3 EN 61000 4 4 EN 61000 4 5 EN 61000 4 6 EN 61000 4 8 EN 61000 4 11 Safety CSA EN IEC UL 60950 1 Compliant UL or CSA Listed USA and Canada CE Marking Europe California Best Management Practices Regulations for Perchlorate Materials This Perchlorate warning applies only to products containing CR Manganese Dioxide Lithium coin cells Perchlorate Material special handling may apply See www disc ca gov hazardouswaste perchlorate SUPERSTORAGESYSTEM 6047R E1R24L User s Manual continued from front The products sold by Supermicro are not intended for and will not be used in life support systems medical equipment nuclear facilities or systems aircraft aircraft devices aircraft emergency com munication devices or other critical systems whose failure to perform be reasonably expected to result in significant injury or loss of life or catastrophic property damage Accordingly Supermicro dis claims any and all liability and should buyer use o
8. This feature allows the user to select bootup screen display between POST mes sages and the OEM logo Select Disabled to display the POST messages Select Enabled to display the OEM logo instead of the normal POST messages The op tions are Enabled and Disabled AddOn ROM Display Mode Use this item to set the display mode for the Option ROM Select Keep Current to use the current AddOn ROM Display setting Select Force BIOS to use the Option ROM display mode set by the system BIOS The options are Keep Current and Force BIOS Bootup Num Lock Use this feature to set the Power on state for the Numlock key The options are Off and On Wait For F1 If Error Select Enabled to force the system to wait until the F1 key is pressed if an error occurs The options are Disabled and Enabled Interrupt 19 Capture Interrupt 19 is the software interrupt that handles the boot disk function When this item is set to Enabled the ROM BIOS of the host adaptors will capture Interrupt 19 7 4 Chapter 7 BIOS at bootup and allow the drives that are attached to these host adaptors to function as bootable disks If this item is set to Disabled the ROM BIOS of the host adap tors will not capture Interrupt 19 and the drives attached to these adaptors will not function as bootable devices The options are Enabled and Disabled Power Configuration Watch Dog Function If enabled the Watch Dog timer will allow the system to automatically reb
9. 2 0 rt i pannum OOOO Com XE OoOoooc CB CO BEHDI Ep E an eS Sp QNS pata T MM DOIG HOODOO OLEO Zo SS qur ap SOOO Con SOOO LILILILILILIL ames ez ao a duri OOOO Con Eeoooss HoOoooos gt ae aw Cc ap ELHDBELDILI nonno JBOD IN upstream port 60 e OOOO000 Hogoi CB CO QLZ3 e Ss FY Wp E aD Zo Qo Gu dir E GS AG Bo a Op qs as av C ap JBOD OUT downstream port JBOD IN upstream port 2 0 e mmm mmm H ERHHB PARES l ECHO poop Ho m an eS oP QNS emj LILILILIEJIE SS porani OOOOOOG aD o o ave aur Hooton eS imimimim i LILILILILILIL as a gt avo p pooonon E ao o o EEELLER dcs ans exu ELIHBOLLLI pooon00
10. LNAF SP Rev 101 Ei 9 j E SB a 5 BA 3 LSI SAS CTRL m z ale si n LSAS4 7 LSASO 3 EX W duids OEIBIOOEIBIODEIBU ODIEIO eum Yd UW Uidh IOHIEIOOLIEIOUCI eel 1a 2000m s 7 oa E te 85S us 9 zd ign Note The SSG 6047R E1R24L comes pre installed with a JBOD expansion port installed in PCI E slot 1 Serverboard SAS components shown in the figure above are not included on the X9DRD 7LNA4F JBOD 1 5 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 1 4 Contacting Supermicro Headquarters Address Super Micro Computer Inc 980 Rock Ave San Jose CA 95131 U S A Tel 1 408 503 8000 Fax 1 408 503 8008 Email marketing supermicro com General Information support supermicro com Technical Support Web Site www supermicro com Europe Address Super Micro Computer B V Het Sterrenbeeld 28 5215 ML s Hertogenbosch The Netherlands Tel 31 0 73 6400390 Fax 31 0 73 6416525 Email sales supermicro nl General Information support supermicro nl Technical Support rma supermicro nl Customer Support Asia Pacific Address Super Micro Computer Inc 4F No 232 1 Liancheng Rd Chung Ho Dist New Taipei City 235 Taiwan Tel 886
11. PCI Exp Generation 2 Select GENS for the device installed on the slot specified to support PCI Exp Generation 3 The options are GEN1 GEN2 and GEN3 Chapter 7 BIOS IIO 2 PCle Port Bifurcation Control This submenu configures the following IO PCle Port Bifurcation Control settings for IIO 2 PCle ports to determine how the available PCI Express lanes to be distributed between the PCI Exp Root ports gt OPI Configuration Current QPI Link This item displays the current status of the QPI Link Current QPI Frequency This item displays the frequency of the QPI Link Isoc Select Enabled to enable Isochronous support to meet QoS Quality of Service requirements This feature is especially important for virtualization technology The options are Enabled and Disabled QPI Quick Path Interconnect Link Speed Mode Use this feature to select data transfer speed for QPI Link connections The options are Slow and Fast QPI Link Frequency Select Use this feature to select the desired QPI frequency The options are Auto 6 4 GT s 7 2 GT s and 8 0 GT s gt DIMM Configuration This section displays the following DIMM information Current Memory Mode This item displays the current memory mode Current Memory Speed This item displays the current memory speed Mirroring Available when supported by the motherboard Memory mirroring creates a duplicate copy of the data stored in the memory to enhance data security Sp
12. Unit Identification Switch LAN1 3 LAN2 4 G bit Ethernet Ports SASO0 3 4 7 SAS 2 0 Ports 0 3 4 7 LSI SAS 2308 controller T SGPIO 1 2 SATA General Purpose I O Headers USB 0 1 2 3 Back Panel USB 0 1 2 3 Ports USB 4 5 USB 8 9 Front Panel Accessible USB Ports 4 5 8 9 USB6 Type A USB Embedded Drive Connector 5 16 Chapter 5 Advanced Serverboard Setup LED Description State LED2 Standby PWR LED Solid Green Standby Power On LED3 UID LED Blue On Unit Identified LEDM1 BMC Heartbeat LED Blinking Green BMC Normal 5 17 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 5 8 Connector Definitions ATX Power 24 pin Connector Pin Definitions Pin Definition Pin Definition Power Connectors 19 48 3V i 3 3V A 24 pin main power supply connec Ses 2 393V tor JPW1 and two 8 pin CPU power SECON 9 GN connectors JPW2 3 must be con LES o REP nected to the power supply These lg Galt e ell power connectors meet the SSI EPS 18 COM 6 5V 12V specification See the table on the 19 COM y COM right for pin definitions 20 Res NC 8 PWR_OK 21 45V 9 5VSB Warning To provide adequate 22 45V 10 a12V power supply to the serverboard 28 45V 11 412V be sure to connect JPW1 and both 24 COM 12 433V JPW2 and JPW3 to the power supply Failure to do so will void the manufacturer warranty on your power supply and serverboard Secondary Power Connector in aioe i JPW2 and JPW3 must also be con Pins Definiti
13. cept RJ45 type cables Please refer to Section 5 11 for LAN LED information Internal Speaker Internal Buzzer SP1 Pin Definition The internal speaker located at SP1 Ping Definitions can be used to provide audible indica tions for various beep codes See the table on the right for pin definitions Pin 1 Pos Beep In Pin 2 Neg Alarm Speaker PWR LED Connector Power LED Speaker Fin Demmutlens Pin Setting Definition On the JD1 header pins 1 3 are for i Pin 1 Anode a power LED and pins 4 7 are for the dn Pin Cathode Speaker Close pins 4 7 with a jumper Pin3 NA to use an external speaker If you wish to use the onboard speaker please close pins 6 7 See the table on the right for speaker pin definitions Speaker Connector Pin Settings Pin Setting Definition Pins 4 7 External Speaker Pins 6 7 Internal Speaker Overheat Fan Fail LED OH Fan Fail LED The JOH1 header is used to connect Status an LED indicator to provide warnings State Message of chassis overheating and fan failure Solid Overheat This LED will blink when a fan failure Blinking Fan Fail occurs Refer to the table on the right for pin definitions Serial Port Pin Definitions Serial Ports COM1 COM2 Two serial ports are included on the Pin vDSfiniuon Pina Penner serverboard COM1 is a backpanel 1 DCD 6 DSR port and COM is a
14. 1066 1333 1066 1066 1333 1333 1600 1333 600 1333 1600 DRx4 4GB 8GB 16GB 1066 1066 1333 1066 1066 1333 1066 1066 1333 1333 1600 1333 1600 1333 1600 QRx4 8GB 16GB 32GB 800 1066 800 066 800 800 QRx8 4GB 8GB 16GB 800 1066 800 1066 800 800 Note For detailed information on memory support and updates please refer to the SMC Recommended Memory List posted on our website at http www supermicro com support resources mem cfm Intel E5 2600 Series Processor LRDIMM Memory Support Ranks Per Memory Capacity Speed MT s and Voltage Validated DIMM amp Data Per DIMM by Slot per Channel SPC and Width DIMM Per Channel DPC See the Note 1 Slot Per 2 Slots Per Below Channel Channel 1DPC 1DPC and 2DPC 1 35V 1 5V 1 35V 1 5V QRx4 DDP 16GB 32GB 1066 1066 1066 1066 1333 1333 1333 QRx8 P 8GB 16GB 1066 1066 1066 1066 1333 1333 1333 Note For detailed information on memory support and updates please refer to the SMC Recommended Memory List posted on our website at http www supermicro com support resources mem cfm Note For the memory modules to work properly please install DIMM modules of the same type same speed and same operating frequency Mixing RDIMMs UDIMMs or LRDIMMs is not allowed Do not install both ECC and Non ECC memory modules on the same motherboard SUPERSTORAGESYSTEM 6047R E1R24
15. 4 Way and 8 Way Patrol Scrub Patrol Scrubbing is a process that allows the CPU to correct correctable memory errors detected on a memory module and send the correction to the requestor the original source When this item is set to Enabled the IO hub will read and write back one cache line every 16K cycles if there is no delay caused by internal processing By using this method roughly 64 GB of memory behind the IO hub will be scrubbed every day The options are Enabled and Disabled Demand Scrub Demand Scrubbing is a process that allows the CPU to correct correctable memory errors found on a memory module When the CPU or I O issues a demand read command and the read data from memory turns out to be a 7 12 Chapter 7 BIOS correctable error the error is corrected and sent to the requestor the original source Memory is updated as well Select Enabled to use Demand Scrubbing for ECC memory correction The options are Enabled and Disabled Data Scrambling Select Enabled to enable data scrambling to ensure data security and integrity The options are Disabled and Enabled Device Tagging Select Enabled to support device tagging The options are Disabled and En abled Thermal Throttling Throttling improves reliability and reduces power consumption in the proces sor via automatic voltage control during processor idle states The options are Disabled and CLTT Closed Loop Thermal Throttling gt South Bridge Configur
16. Circuit Overloading Consideration should be given to the connection of the equipment to the power supply circuitry and the effect that any possible overloading of circuits might have on overcurrent protection and power supply wiring Appropriate consideration of equipment nameplate ratings should be used when addressing this concern Reliable Ground A reliable ground must be maintained at all times To ensure this the rack itself should be grounded Particular attention should be given to power supply connec tions other than the direct connections to the branch circuit i e the use of power strips etc 2 3 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 2 4 Rack Mounting Instructions Rack Rails Assembly This section provides information on installing the SC846 chassis into a rack unit with the rails provided There are a variety of rack units on the market which may mean that the assembly procedure will differ slightly You should also refer to the installation instructions that came with the rack unit you are using Note This rail will fit a rack between 27 and 34 45 deep Identifying the Inner Rack Rails The chassis package includes a rack rail assembly in the rack mounting kit Each assembly consists of an inner rail that secures to the chassis and an outer rail that is attached directly to the rack Inner Rail Assembly Figure 2 1 Identifying the Rack Rails 2 4 Chapter 2 Server Installation Figu
17. Controller Interface EHCI hand off When enabled EHCI ownership change will be claimed by the EHCI driver The options are Disabled and Enabled gt SATA Configuration When this submenu is selected the AMI BIOS automatically detects the presence of IDE or SATA devices and displays the following items SATA Port0 SATA Port5 The AMI BIOS displays the status of each SATA port as detected by the BIOS SATA Mode Use this feature to configure SATA mode for a selected SATA port The options are Disabled IDE Mode AHCI Mode and RAID Mode The following are displayed depending on your selection IDE Mode The following items are displayed when IDE Mode is selected Serial ATA SATA Controller 0 1 Use this feature to activate or deactivate the SATA controller and set the compatibility mode The options for SATA Controller 0 are Disabled En hanced and Compatible The options for SATA Controller 1 are Disabled and Enhanced AHCI Mode The following items are displayed when the AHCI Mode is selected Aggressive Link Power Management When Enabled the SATA AHCI controller manages the power usage of the SATA link The controller will put the link in a low power mode during extended periods of I O inactivity and will return the link to an active state when I O activity resumes The options are Enabled and Disabled 7 14 Chapter 7 BIOS Port 0 5 Hot Plug Select Enabled to enable hot plug support for a particular port which
18. Logs Select the Event Logs tab to access the following submenu items Change SMBIOS Event Log Settings This feature allows the user to configure SMBIOS Event settings Enabling Disabling Options SMBIOS Event Log Select Enabled to enable SMBIOS System Management BIOS Event Logging during system boot The options are Enabled and Disabled Runtime Error Logging Support Select Enabled to support Runtime Error Logging The options are Enabled and Disabled Memory Correctable Error Threshold This feature allows the user to enter the threshold value for correctable memory errors The default setting is 10 PCI Error Logging Support Select Enabled to support error event logging for PCI slots The options are Enabled and Disabled 7 25 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Erasing Settings Erase Event Log Select Enabled to erase the SMBIOS System Management BIOS Event Log which is completed before a event logging is initialized upon system reboot The options are No Yes Next reset and Yes Every reset When Log is Full Select Erase Immediately to immediately erase SMBIOS error event logs that ex ceed the limit when the SMBIOS event log is full Select Do Nothing for the system to do nothing when the SMBIOS event log is full The options are Do Nothing and Erase Immediately SMBIOS Event Log Standard Settings Log System Boot Event Select Enabled to log system boot events The options are Disable
19. PCB board located just behind the system status LEDs on the chassis See Chapter 5 for details and pin descriptions 5 2 Chapter 5 Advanced Serverboard Setup Figure 5 1 Control Panel Header Pins Ground NMI x Key e e x Key Power On LED ofo 3 3V HDD LED ofo ID UID SW 3 3V Stby NIC Link LED e e NiC1 Activity LED NIC2 Link LED e e NIC2 Activity LED OH Fan Fail LED e Red Blue Cathode Power Fail LED e e 3 3v Ground ofo Reset Button Ground Power Button 1 2 5 3 Rear I O Ports The I O ports are color coded in conformance with the PC 99 specification See Figure 5 2 below for the colors and locations of the various I O ports Figure 5 2 Rear I O Ports O OQ LE mimi E Q O ge d oo illil Ce Rear I O Ports 1 COM Port 1 7 LAN Port 1 2 USB Port 0 8 LAN Port 2 3 USB Port 1 9 LAN Port 3 4 Dedicated IPMI LAN 10 LAN Port 4 5 USB Port 2 11 VGA Port 6 USB Port 3 12 UID Switch SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 5 4 Installing the Processor and Heatsink the label area of the fan AN When handling the processor package avoid placing direct pressure on Notes Always connect the power cord last and always remove it before adding re moving or changing any hardware components Make sure that you install the processor into the CPU socket before you install the CPU heatsink
20. SATA controller is also integrated into the chipset to provide two SATA 3 6 Gbps and four SATA 2 3 Gbps ports which are RAID 0 1 5 and 10 supported The SATA drives are hot swappable units PCI Expansion Slots The X9DRD 7LN4F JBOD has six PCI E 3 0 x8 slots The default configuration includes a port plate with dual JBOD expansion ports occupying slot 1 PCI E 3 0 x8 Note that expansion slots are controlled by the CPUs so two CPUs need to be installed to enable all PCI expansion slots See Chapter 5 for details 1 2 Chapter 1 Introduction 1 3 Server Chassis Features The following is a general outline of the main features of the SC846E16 R920B server chassis System Power The SC846E16 R920B features a redundant two separate power modules 920W high efficiency power supply with I C This power redundancy feature allows you to replace a failed power supply without shutting down the system Hard Drives The SC846E16 R920B chassis was designed to support 24 dual channel SATA hard drives which are hot swappable units 2x 2 5 rear mounted hot swap drive bays are available as an option for use with the onboard SATA controller MCP 220 84606 0N Note The operating system you use must have RAID support to enable the hot swap capability of the SATA drives Front Control Panel The control panel on the SuperServer 6047R E1R24L provides you with system monitoring and control LEDs indicate system power HDD activity n
21. The options are 7 Bits and 8 Bits Parity A parity bit can be sent along with regular data bits to detect data transmission errors Select Even if the parity bit is set to 0 and the number of 1 s in data bits is even Select Odd if the parity bit is set to 0 and the number of 1 s in data bits is odd Select None if you do not want to send a parity bit with your data bits in transmission Select Mark to add a mark as a parity bit to be sent along with the data bits Select Space to add a Space as a parity bit to be sent with your data bits The options are None Even Odd Mark and Space Stop Bits A stop bit indicates the end of a serial data packet Select 1 Stop Bit for standard serial data communication Select 2 Stop Bits if slower devices are used The options are 1 and 2 Flow Conirol This feature allows the user to set the flow control for Console Redirection to prevent data loss caused by buffer overflow Send a Stop signal to stop send ing data when the receiving buffer is full Send a Start signal to start sending data when the receiving buffer is empty The options are None and Hardware RTS CTS VT UTF8 Combo Key Support Select Enabled to enable VT UTF8 Combination Key support for ANSI VT100 terminals The options are Enabled and Disabled Recorder Mode Select Enabled to capture the data displayed on a terminal and send it as text messages to a remote server The options are Disabled and Enabled Resolution 100x31 Sel
22. This item displays the speed of the CPU installed in Socket 1 Socket 2 64 bit This item indicates if the CPU installed in Socket 1 or Socket 2 supports 64 bit technology Clock Spread Spectrum Select Enable to enable Clock Spectrum support which will allow the BIOS to moni tor and attempt to reduce the level of Electromagnetic Interference caused by the components whenever needed The options are Disabled and Enabled RTID Record Types IDs This feature displays the total number of Record Type IDs for local and remote pools The options are Optimal and Alternate Hyper threading Select Enabled to support Intel Hyper threading Technology to enhance CPU per formance The options are Enabled and Disabled Active Processor Cores Set to Enabled to use a processor s second core and above Please refer to Intel s website for more information The options are All 1 2 4 and 6 Limit CPUID Maximum This feature allows the user to set the maximum CPU ID value Enable this function to boot the legacy operating systems that cannot support processors with extended CPUID functions The options are Enabled and Disabled for the Windows OS 7 6 Chapter 7 BIOS Execute Disable Bit Available if supported by the OS amp the CPU Select Enabled to enable the Execute Disable Bit which will allow the processor to designate areas in the system memory where an application code can execute and where it cannot thus preventing a worm or
23. a small screwdriver 3 Remove the screwdriver or shorting device 4 Reconnect the power cord s and power on the system Note Do not use the PW_ON connector to clear CMOS BMC Enable Jumper JPB1 allows you to enable the BMC Enable embedded the Winbond WPCM450R dumper Setungs BMC Baseboard Management Con troller to provide IPMI 2 0 KVM sup Pins1 2 BMC Enable port on the serverboard See the table Pins23 Normal Default on the right for jumper settings Jumper Setting Definition 5 25 GLAN Enable Disable JPL1 enables or disables the GLAN ports on the serverboard See the table on the right for jumper settings C Bus to PCI Exp Slots Jumpers JI C1 and JI C2 allow you to connect the System Management Bus I C to the PCI Express slots Both jumpers must be set to the same setting See the table on the right for jumper settings VGA Enable Disable JPG1 allows you to enable or disable the VGA port The default position is on pins 1 and 2 to enable VGA See the table on the right for jumper settings SAS Enable Jumper JPS1 allows the user to enable onboard LSI SAS support The default setting is on 1 2 to enable SAS con nections 0 3 4 7 See the table on the right for jumper settings Watch Dog Enable Disable Watch Dog is a system monitor that can reboot the system when a software application hangs Jumping pins 1 2 will cause WD to reset the system if an application hangs Jumping
24. a virus from flooding illegal codes to overwhelm the processor or damage the system during an attack The default is Enabled Refer to Intel and Microsoft Web sites for more information Intel AES NI Select Enable to use the Intel Advanced Encryption Standard AES New Instruc tions NI to ensure data security The options are Enabled and Disabled MLC Streamer Prefetcher Available when supported by the CPU If set to Enabled the MLC mid level cache streamer prefetcher will prefetch streams of data and instructions from the main memory to the L2 cache to improve CPU performance The options are Disabled and Enabled MLC Spatial Prefetch Available when supported by the CPU If this feature is set to Disabled The CPU prefetches the cache line for 64 bytes If this feature is set to Enabled the CPU fetches both cache lines for 128 bytes as comprised The options are Disabled and Enabled DCU Streamer Prefetcher Available when supported by the CPU Select Enabled to support Data Cache Unit DCU prefetch of L1 data to speed up data accessing and processing in the DCU to enhance CPU performance The options are Disabled and Enabled DCU IP Prefetcher Select Enabled for DCU Data Cache Unit IP Prefetcher support which will prefetch IP addresses to improve network connectivity and system performance The options are Enabled and Disabled Intel Virtualization Technology Available when supported by the CPU Select Enabl
25. header located 2 RXD 7 RTS near the PCI E slot 1 See the table a wo e on the right for pin definitions 4 DTR 9 RI 5 Ground 10 NC 5 21 Universal Serial Bus USB There are four Universal Serial Bus ports USBO 1 2 3 located on the I O panel In addition there is one Type A port USB6 and four head ers USB4 5 8 9 located on the serverboard The headers can be used to provide front side USB access cables not included See the table on the right for pin definitions SGPIO Headers The SGPIO Serial General Purpose Input Output headers are used to communicate with the enclosure management chip on the backplane See the table on the right for pin definitions DOM Power Connector A power connector for SATA DOM Disk On Module devices is located at JSD1 Connect an appropriate cable here to provide power support for your Serial Link DOM devices Overheat LED Fan Fail JOH1 The JOH1 header is used to connect an LED to provide warning of chassis overheating or fan failure This LED will blink to indicate a fan failure Refer to the tables on right for LED status and pin definitions SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Back Panel USB USB 0 1 2 3 Pinf Definitions 1 45V 2 PO 3 PO 4 Ground 5 N A USB Header USB4 5 8 9 6 Pin Definitions USB4 6 USB5 7 Pini Definition Pini Definition 1 45V 1 45V 2 PO 2 PO 3 PO 3 PO 4 Ground 4 Ground 5 N
26. in should include two sets of rail assemblies two rail mounting brackets and the mounting screws you will need to install the system into the rack Follow the steps in the order given to complete the installation process in a minimum amount of time Please read this section in its en tirety before you begin the installation procedure outlined in the sections that follow Choosing a Setup Location Leave enough clearance in front of the rack to enable you to open the front door completely 725 inches and approximately 30 inches of clearance in the back of the rack to allow for sufficient airflow and ease in servicing This product is for installation only in a Restricted Access Location dedicated equipment rooms service closets and the like 2 1 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual This product is not suitable for use with visual display work place devices acccording to 2 of the the German Ordinance for Work with Visual Display Units AN Warnings and Precautions ZN Rack Precautions Ensure that the leveling jacks on the bottom of the rack are fully extended to the floor with the full weight of the rack resting on them In single rack installation stabilizers should be attached to the rack In multiple rack installations the racks should be coupled together Always make sure the rack is stable before extending a component from the rack You should extend only one component at a time exten
27. pins 2 3 will generate a non maskable interrupt signal for the application that hangs See the table on the right for jumper settings Watch Dog must also be enabled in BIOS 5 26 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual GLAN Enable Jumper Settings Jumper Setting Definition 1 2 Enabled default 2 3 Disabled FC to PCI E Slots Jumper Settings Jumper Setting Definition Pins 1 2 Enabled Pins 2 3 Disabled VGA Enable Disable Jumper Settings Jumper Setting Definition Pins 1 2 Enabled Pins 2 3 Disabled SAS Enable Jumper Settings Jumper Setting Definition 1 2 Enabled Default 2 3 Disabled Watch Dog Jumper Settings Jumper Setting Definition Pins 1 2 Reset Pins 2 3 NMI Open Disabled 5 10 Onboard Indicators LAN LEDs The Ethernet ports located beside the VGA port have two LEDs On each port the yellow LED flashes to indi cate activity while the other LED may be green amber or off to indicate the speed of the connection See the table on the right for the functions associ ated with the connection speed LED IPMI Dedicated LAN LEDs An additional IPM Dedicated LAN is also located on the I O backplane The amber LED on the right indicates activity while the green LED on the left indicates the speed of the connec tion See the table at right for more information Standby Power LED An St
28. previously saved in the system When the dialog box appears asking you if you want to restore user s defaults select Yes to restore the user s defaults previously saved in the system or select No to abandon the user s defaults that were previously saved Boot Override This feature allows the user to override the Boot Option Priorities setting in the Boot menu and instead boot the system with one of the listed devices This is a one time override 7 32 Appendix A BIOS Error Beep Codes Appendix A BIOS Error Beep Codes During the POST Power On Self Test routines which are performed at each system boot errors may occur Non fatal errors are those which in most cases allow the system to continue to boot The error messages normally appear on the screen Fatal errors will not allow the system to continue with bootup procedure If a fatal error occurs you should consult with your system manufacturer for possible repairs These fatal errors are usually communicated through a series of audible beeps The numbers on the fatal error list correspond to the number of beeps for the corresponding error BIOS Error Beep Codes Beep Code LED Error Message Description 1 beep Refresh Ready to boot 5 short beeps 1 long Memory error No memory detected in the beep system 5 beeps No Con In or No Con In USB or PS 2 key Con Out devices board PCI or Serial Console Redirection IPMI KVM or SOL Con Out Video Contro
29. 2 8226 3990 Fax 886 2 8226 3991 Web Site www supermicro com tw Technical Support Email support supermicro com tw Tel 886 2 8228 1366 ext 132 or 139 1 6 Chapter 2 Server Installation Chapter 2 Server Installation 2 1 Overview This chapter provides a quick setup checklist to get your SuperServer 6047R E1R24L up and running Following these steps in the order given should enable you to have the system operational within a minimum amount of time This quick setup assumes that your system has come to you with the processors and memory preinstalled If your system is not already fully integrated with a serverboard pro cessors system memory etc please turn to the chapter or section noted in each step for details on installing specific components 2 2 Unpacking the System You should inspect the box the SuperServer 6047R E1R24L was shipped in and note if it was damaged in any way If the server itself shows damage you should file a damage claim with the carrier who delivered it Decide on a suitable location for the rack unit that will hold the SuperServer 6047R E1R24L It should be situated in a clean dust free area that is well ventilated Avoid areas where heat electrical noise and electromagnetic fields are generated You will also need it placed near a grounded power outlet Read the Rack and Server Precautions in the next section 2 3 Preparing for Setup The box the SuperServer 6047R E1R24L was shipped
30. 47R E1R24L User s Manual When SEL is Full This feature allows the user to decide what the BIOS should do when the system event log is full Select Erase Immediately to erase all events in the log when the system event log is full The options are Do Nothing and Erase Immediately Custom EFI Logging Options Log EFI Status Codes Select Enabled to log EFI Extensible Firmware Interface Status Codes Error Codes or Progress Codes The options are Enabled and Disabled Note After making changes on a setting be sure to reboot the system for the changes to take effect gt BMC Network Configuration LAN Channel 1 This feature allows the user to configure the settings for LAN1 Port Update IPMI LAN Configuration This feature allows the BIOS to implement any IP MAC address changes at the next system boot If the option is set to Yes any changes made to the settings below will take effect when the system is rebooted The options are No and Yes Configuration Address Source This feature allows the user to select the source of the IP address for this computer If Static is selected you will need to know the IP address of this computer and enter it to the system manually in the field If DHCP is selected the BIOS will search for a DHCP Dynamic Host Configuration Protocol server in the network that is at tached to and request the next available IP address for this computer The options are DHCP and Static The following items are ass
31. 7 15 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual SERR Generation Select Enabled to allow a PCI device to generate an SERR number for a PCI Bus Signal Error Event The options are Enabled and Disabled Maximum Payload Select Auto to allow the system BIOS to automatically set the maximum payload value for a PCI E device to enhance system performance The options are Auto 128 Bytes and 256 Bytes Maximum Read Request Select Auto to allow the system BIOS to automatically set the maximum Read Request size for a PCI E device to enhance system performance The options are Auto 128 Bytes 256 Bytes 512 Bytes 1024 Bytes 2048 Bytes and 4096 Bytes ASPM Support This feature allows the user to set the Active State Power Management ASPM level for a PCI E device Select Force LOs to force all PCI E links to operate at LOs state Select Auto to allow the system BIOS to automatically set the ASPM level for the system Select Disabled to disable ASPM support The options are Disabled Force LOs and Auto A Warning Enabling ASPM support may cause some PCI E devices to fail CPU1 Slot 1 PCI E 3 0 x8 OPROM CPU1 Slot 2 PCI E 3 0 x8 OPROM CPU2 Slot 3 PCI E 3 0 x8 OPROM CPU2 Slot 4 PCI E 3 0 x8 OPROM CPU2 Slot 5 PCI E 3 0 x8 OPROM CPU1 Slot 6 PCI E 3 0 x 8 OPROM Select Enabled to enable Option ROM support to boot the computer using a de vice installed on the slot specified above The options are Enabled and Disabled Onboard LAN O
32. A 5 Key SGPIO Header Pin Definitions Pin Definition Pin Definition 1 Nc a wc 3 Ground 4 DATA Out 5 Load 6 Ground 7 Clock 8 NC NC No Connection DOM PWR Pin Definitions Pin Definition 1 5V 2 Ground 3 Ground OH Fan Fail LED Overheat LED States Pin Definitions State Message Pin Definition Solid Overheat 1 5vDC Blinking Fan Fail 2 OH Active 5 22 IPMB A System Management Bus header for IPMI 2 0 is located at IPMB Con nect the appropriate cable here to use the IPMB PC connection on your system Standby Power Header The 5V Standby Power header is located at JSTBY1 on the mother board See the table on the right for pin definitions You must also have a card with a Standby Power connector and a cable to use this feature LAN3 LAN4 LED Indicators The NIC Network Interface Control ler LED connections for LAN Port 3 are located on pins 3 and 4 of JF2 and the LED connections for LAN Port 4is on Pins 1 and 2 of JF2 Attach NIC LED cables here to display network activities Refer to the table on the right for pin definitions Power Supply SMBus I C Header The power System Management Bus header at JPI C1 is used to monitor the status of the power supply fan and system temperature See the table on the right for pin definitions 5 23 Chapter 5 Advanced Serverboard Setup IPMB Header Pin Definitions Pin Definition
33. L User s Manual 1 CPU 2 DIMMs Populate blue DIMM slots first then the rest in any order 5 12 Chapter 5 Advanced Serverboard Setup 2 CPU 4 DIMMs 2 CPU 6 DIMMs F B Lar 2 CPU 8 DIMMs 2 CPU 10 16 DIMMs Populate blue DIMM slots first then any memory pairs in the remaining slots For two CPUs and 16 DIMMs populate all DIMM slots 5 13 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 5 6 Adding PCI Add On Cards The 6047R E1R24L can accommodate up to six full height PCI E 3 0 x8 expansion add on cards Installing an Add on Card T Begin by removing the
34. SNK P0048PS Three 8 cm system fans FAN 0127L4 Two rear exhaust fans FAN 0125L4 One air shroud MCP 310 49003 0N SATA Accessories One SATA backplane BPN SAS2 846EL1 Twenty four drive carriers MCP 220 00075 OB JBOD Expansion Port CBL 0352L One rackmount kit MCP 290 00057 0N One CD containing drivers and utilities Note a complete list of safety warnings is provided on the Supermicro web site at http Awww supermicro com about policies safety_information cfm 1 1 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 1 2 Serverboard Features The 6047R E1R24L is built around the X9DRD 7LNAF JBOD a dual processor serverboard based on the Intel C602J chipset Below are the main features of the X9DRD 7LN4F JBOD See Figure 1 1 for a block diagram of the chipset Processors The X9DRD 7LN4F JBOD supports single or dual Intel Xeon E5 2600 Series processors Please refer to the serverboard description pages on our web site for a complete listing of supported processors www supermicro com Memory The X9DRD 7LN4F JBOD has 16 DIMM slots that can support 512 GB of ECC DDR3 Registered memory RDIMM or up to 128 GB of ECC non ECC DDR3 Unbuffered memory UDIMM See Chapter 5 for details SAS A SAS 2 0 controller is integrated into the serverboard providing 8x lanes of 6Gb s SAS with basic HBA ITMode controller functionality The controller supports the attachment of 122 SAS or SATA devices Serial ATA A
35. SUPERO SUPER STORAGE SYSTEM 6047R E1R24L USER S MANUAL 1 0 The information in this User s Manual has been carefully reviewed and is believed to be accurate The vendor assumes no responsibility for any inaccuracies that may be contained in this document makes no commitment to update or to keep current the information in this manual or to notify any person or organization of the updates Please Note For the most up to date version of this manual please see our web site at www supermicro com Super Micro Computer Inc Supermicro reserves the right to make changes to the product described in this manual at any time and without notice This product including software and docu mentation is the property of Supermicro and or its licensors and is supplied only under a license Any use or reproduction of this product is not allowed except as expressly permitted by the terms of said license IN NO EVENT WILL SUPERMICRO BE LIABLE FOR DIRECT INDIRECT SPECIAL INCIDENTAL SPECULATIVE OR CONSEQUENTIAL DAMAGES ARISING FROM THE USE OR INABILITY TO USE THIS PRODUCT OR DOCUMENTATION EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGES IN PARTICULAR SUPERMICRO SHALL NOT HAVE LIABILITY FOR ANY HARDWARE SOFTWARE OR DATA STORED OR USED WITH THE PRODUCT INCLUDING THE COSTS OF REPAIRING REPLACING INTEGRATING INSTALLING OR RECOVERING SUCH HARDWARE SOFTWARE OR DATA Any disputes arising between manufactur
36. Select Disabled to prevent the serial port from accessing any system resources When this option is set to Disabled the serial port becomes unavailable The options are Auto IO 3F8h IRQ 4 IO 3F8h IRQ 3 4 5 6 7 9 10 11 12 IO 2F8h IRQ 3 4 5 6 7 9 10 11 12 IO 3E8h IRQ 3 4 5 6 7 9 10 11 12 IO 2E8h and IRQ 3 4 5 6 7 9 10 11 12 Device Mode Use this feature to select the desired mode for a serial port specified The options are Normal and High Speed P Serial Port 2 Configuration Serial Port Select Enabled to enable serial port 2 The options are Enabled and Disabled Device Settings This item displays the settings of Serial Port 2 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Change Settings This option specifies the base I O port address and the Interrupt Request address of Serial Port 2 Select Disabled to prevent the serial port from accessing any system resources When this option is set to Disabled the serial port becomes unavailable The options are Auto IO 3F8h IRQ 4 lO 3F8h IRQ 3 4 5 6 7 9 10 11 12 IO 2F8h IRQ 3 4 5 6 7 9 10 11 12 IO 3E8h IRQ 3 4 5 6 7 9 10 11 12 and lO 2E8h and IRQ 3 4 5 6 7 9 10 11 12 Device Mode Use this feature to select the desired mode for a serial port specified The options are Normal and High Speed Serial Port 2 Attribute Use this feature to select the attribute for this serial port The options are SOL S
37. Setup This chapter covers the steps required to install components and perform main tenance on the SC846E16 R920B chassis For component installation follow the steps in the order given to eliminate the most common problems encountered If some steps are unnecessary skip ahead to the step that follows Tools Required The only tool you will need to install components and perform maintenance is a Philips screwdriver 6 1 Static Sensitive Devices Electrostatic discharge ESD can damage electronic components To prevent damage to any printed circuit boards PCBs it is important to handle them very carefully The following measures are generally sufficient to protect your equipment from ESD damage Precautions e Use a grounded wrist strap designed to prevent static discharge Touch a grounded metal object before removing any board from its antistatic bag Handle a board by its edges only do not touch its components peripheral chips memory modules or gold contacts When handling chips or modules avoid touching their pins Put the serverboard add on cards and peripherals back into their antistatic bags when not in use For grounding purposes make sure your computer chassis provides excellent conductivity between the power supply the case the mounting fasteners and the serverboard Unpacking The serverboard is shipped in antistatic packaging to avoid static damage When unpacking the board make sure the person h
38. a ENE era E E ad 5 8 5 5 Installing Memoty erret ten tene tnt ta enne prp e Ends 5 9 Memory Support nennen nenne nnne rennen enne nnne nnns 5 9 DIMM Installation 1 ete enitn eniin tuno enn rano tne inne 5 9 5 6 X Adding PCI Add On Cards 5 14 5 7 Servermboatrd Delt ils cie i cedri edet 5 15 X9DRD 7LN4F JBOD Quick Reference sse 5 16 5 8 Connector Definitions nitro tre vn tetti entra 5 18 5 9 4dumiper Settings Linee ibid eran 5 25 5 10 Onboard Indicators e midi a eia 5 27 5T SATA POMS ertet EUREN NEG MI MEMINI ILE 5 28 vii SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 5 12 6 1 6 2 6 3 6 4 6 5 6 6 Installing Software rero icr tarte eie 5 29 SUPSDOCHON i e tee 5 30 Chapter 6 Advanced Chassis Setup Static Sensitive DEVICES assetiat ete age ee dne 6 1 Precautions snina Heri rosea E c nr REA RA RECHT DU ee ER ENT EDR E Eae 6 1 Beide M 6 1 Control Pariel riori ee bo Rond pL eer Rede 6 2 Removing the Chassis Cover ucc deridet i ee rn edes 6 3 System Fans System Fan Failire ee tra eren re trie t he E SERIE ER E eaa T 6 4 Replacing System Faris i i ienai RERO ED REED rar e RAE M Ringe 6 4 Rear Exhaust Fansite reri dr rer reae 6 4 Drive Bay Installation Remowval sees 6 5 Accessing the Drive Bays rne re erre 6 5 SATA Drive Installatign oci eee reet
39. add color and function key support Select ANSI to use the extended ASCII character set Select VT UTF8 to use UTF8 encoding to map Unicode characters into one or more bytes The options are ANSI VT100 VT100 and VT UTF8 Bits Per Second This item sets the transmission speed for a serial port used in Console Redirec tion Make sure that the same speed is used in the host computer and the client computer A lower transmission speed may be required for long and busy lines The options are 9600 19200 57600 and 115200 bits per second Flow Control This feature allows the user to set the flow control for Console Redirection to prevent data loss caused by buffer overflow Send a Stop signal to stop send ing data when the receiving buffer is full Send a Start signal to start sending data when the receiving buffer is empty The options are None Hardware RTS CTS and Software Xon Xoff 7 20 Chapter 7 BIOS Data Bits Parity Stop Bits The status of these features is displayed gt ACPI Settings Use this feature to configure Advanced Configuration and Power Interface ACPI power management settings for your system ACPI Sleep State Use this feature to select the ACPI State when the system is in sleep mode Select S1 CPU Stop Clock to erase all CPU caches and stop executing instructions Power to the CPU s and RAM is maintained but RAM is refreshed Select Sus pend Disabled to use power reduced mode Power will
40. and save changes Save Options Save Changes Select this option and press lt Enter gt to save all changes you ve done so far and return to the AMI BIOS utility Program When the dialog box appears asking you if you want to save configuration select Yes to save the changes or select No to return to the BIOS without making changes 7 31 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Discard Changes Select this feature and press lt Enter gt to discard all the changes and return to the BIOS setup When the dialog box appears asking you if you want to load previ ous values select Yes to load the values previous saved or select No to keep the changes you ve made so far Restore Optimized Defaults Select this feature and press lt Enter gt to load the optimized default settings that help optimize system performance When the dialog box appears asking you if you want to load optimized defaults select Yes to load the optimized default settings or select No to abandon optimized defaults Save as User Defaults Select this feature and press lt Enter gt to save the current settings as the user s defaults When the dialog box appears asking you if you want to save values as user s defaults select Yes to save the current values as user s default settings or select No to keep the defaults previously saved as the user s defaults Restore User Defaults Select this feature and press lt Enter gt to load the user s defaults
41. andby Power LED is located at LE1 This LED Indicator is lit when the system is on Be sure to unplug the power cable before removing or adding any components See the table on the right for more details BMC Heartbeat LED A BMC Heartbeat LED is located at LEDM1 on the serverboard When blinking BMC is functioning normally 5 27 Chapter 5 Advanced Serverboard Setup Activity LED un Link Pc um LED JLAN1 2 LED Connection Speed Indicator LED Color Definition oft NC or 10 Mbps Green 100 Mbps Amber 1 Gbps IPMI LAN Link LED F Activity LED IPMI LAN Link LED amp Activity LED LED Status Definition Link Left Green Solid 100 Mbps Activity Right Amber Blinking Active Onboard PWR LED Indicator LED States LED Color Definition Off System Off PWR cable not connected Green System On Green ACPI S1 State Flashing Quickly BMC Heartbeat LED LED Definition D1 Blinking BMC Normal SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 5 11 SATA Ports Serial ATA Ports There are six Serial ATA Ports l SATA Port Pin Definitions SATAO I SATA 5 located on the em m Pin Definition Pin Definition serverboard including four SATA2 10 Ground 2 TP ports and two SATA3 ports These Beebe 3 TXN 4 Ground ports provide serial link signal con nections whi
42. andling it is static protected 6 1 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Figure 6 1 Front and Rear Chassis Views Control Panel Hard Drives 24 Power Supplies 2 Hardware RAID Add on Card and JBOD Expansion Ports DODO OOG00000005855 HEEIBBOBCGBBEBHHH SGG08000008S5 SGG08000008S5 DOC GG0000000 SSeS EISE ail willis S f i 1 e D d Optional Rear Hot Swap Drive Bays V O Ports PCI Expansion Slots 6 2 Control Panel The control panel located on the front of the chassis must be connected to the JF1 connector on the serverboard to provide you with system status indications A ribbon cable has bundled these wires together to simplify the connection Connect the cable from JF1 on the serverboard to the Control Panel PCB printed circuit board Make sure the red wire plugs into pin 1 on both connectors Pull all excess cabling out of the airflow path The LEDs inform you of system status See Chap ter 3 for details on the LEDs and the control panel buttons Details on JF1 can be found in Chapter 5 6 2 Chapter 6 Advanced Chassis Setup 6 3 Removing th
43. aring Available when supported by the motherboard Memory sparing enhances system reliability availability and serviceability 7 11 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual gt DIMM Information CPU Socket 1 DIMM Information CPU Socket 2 DIMM Information The status of the memory modules detected by the BIOS will be displayed as detected by the BIOS Memory Mode When Independent is selected all DIMMs are available to the operating system When Mirroring is selected the motherboard maintains two identical copies of all data in memory for data backup When Lock Step is selected the motherboard uses two areas of memory to run the same set of operations in parallel The options are Independent Mirroring and Lock Step DRAM RAPL Mode RAPL Running Average Power Limit provides mechanisms to enforce power consumption limits on supported processors The options are Disabled DRAM RAPL MODEO and DRAM RAPL MODE1 DDR Speed Use this feature to force a DDR3 memory module to run at a frequency other than what is specified in the specification The options are Force DDR3 800 Force DDR3 1066 Force DDR3 1333 Force DDR3 1600 and Force SPD and Auto Channel Interleaving This feature selects from the different channel interleaving methods The options are Auto 1 Way 2 Way 3 Way and 4 Way Rank Interleaving This feature allows the user to select a rank memory interleaving method The options are Auto 1 Way 2 Way
44. ate and remain on until the failed module has been replaced Replacements can be ordered directly from Supermicro see contact information in the Preface The power supply modules have a hot swap capability meaning you can replace the failed module without powering down the system Removing Replacing the Power Supply 1 First unplug the power cord from the failed power supply module 2 Push the release tab on the back of the power supply as illustrated 3 Pull the power supply out using the handle provided 4 Replace the failed power module with another of the same model 5 Push the new power supply module into the power bay until it clicks into the locked position 6 Plug the AC power cord back into the module 6 12 Chapter 6 Advanced Chassis Setup Figure 6 11 Replacing a Power Supply Module Release Tab 6 7 Attaching a JBOD Expansion Chassis The SSG 6047R E1R24L features dual JBOD expansion ports The Figure below illustrates the recommended expansion strategy The JBOD attachment will vary depending on the specific JBOD chassis that is being connected JBOD image provided for reference purposes port location and routing specifications are subject to change Please follow the instructions provided with the JBOD 6 13 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Figure 6 12 JBOD Expansion Port 2x JBOD OUT downstream ports
45. ation Intel VT d Select Enabled to enable Intel Virtualization Technology support for Direct I O VT d by reporting the I O device assignments to the VMM Virtual Machine Monitor through the DMAR ACPI Tables This feature offers fully protected I O resource sharing across Intel platforms providing greater reliability security and availability in networking and data sharing The options are Enabled and Disabled Intel OAT Select Enabled to enable Intel I OAT I O Acceleration Technology which sig nificantly reduces CPU overhead by leveraging CPU architectural improvements and freeing the system resource for other tasks The options are Disabled and Enabled DCA Support When set to Enabled this feature uses Intel s DCA Direct Cache Access Technology to improve data transfer efficiency The options are Enabled and Disabled IIO 1 PCle Port Bifurcation Control This submenu configures the following IO PCle Port Bifurcation Control settings for IIO 1 PCle ports to determine how the available PCI Express lanes to be distributed between the PCI Exp Root Ports CPU1 Slot1 PCI E 3 0 x8 Link Speed CPU1 Slot2 PCI E 3 0 x8 Link Speed CPU1 Slot6 PCI E 3 0 x8 Link Speed CPU2 Slot3 PCI E 3 0 x8 Link Speed CPU2 Slot4 PCI E 3 0 x8 Link Speed CPU2 Slot5 PCI E 3 0 x8 Link Speed Select GEN1 for the device installed on the slot specified to support PCI Exp Generation 1 Select GEN2 for the device installed on the slot specified to support
46. ation This feature allows the user to configure the settings for the Intel PCH chip PCH Information This feature displays the following PCH information Name This item displays the name of the PCH chip Stepping This item displays the status of the PCH stepping USB Devices This item displays the USB devices detected by the BIOS All USB Devices This feature enables all USB ports devices The options are Disabled and Enabled If set to Enabled EHCI Controller 1 and Controller 2 will appear EHCI Controller 1 EHCI Controller 2 Available when All USB Devices is set to Enabled Select Enabled to enable EHCI Enhanced Host Controller Interface Controller 1 or Controller 2 The options are Disabled and Enabled Legacy USB Support Available when USB Functions is not Disabled Select Enabled to support legacy USB devices Select Auto to disable legacy sup port if USB devices are not present Select Disabled to have USB devices available for EFI Extensive Firmware Interface applications only The settings are Enabled Disabled and Auto 7 13 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Port 60 64 Emulation Select Enabled to enable I O port 60h 64h emulation support for the legacy USB keyboard so that it can be fully supported by the operating systems that does not recognize a USB device The options are Disabled and Enabled EHCI Hand Off This item is for operating systems that do not support Enhanced Host
47. ch are faster than Paral 5 EUN RX lel ATA See the table on the right for T Ground pin definitions Note For more information on SATA HostRAID configuration please refer to the Intel SATA HostRAID User s Guide posted on our website 9 http www supermicro com SAS2 Ports SAS Port Eight Serial Attached SCSI Ports Pin Definitions SASO 3 4 7 located on the moth Pinf Definition Pin Definition erboard to provide serial link con 1 Ground 2 xe nections These ports are supported 3 TXN 4 Ground by the LSI SAS2 2308 Controller s RXN e me See the table on the right for pin 7 Ground definitions 5 28 Chapter 5 Advanced Serverboard Setup 5 12 Installing Software After the hardware has been installed you should first install the operating system and then the drivers The necessary drivers are all included on the Supermicro CDs that came packaged with your serverboard SUPERMICRO X9DRD 7LN4F Motherboard Drivers amp Tools WinXP xj Intel Chipset INF files SUPERMICR Matrox G200e Graphics Driver Drivers amp Tools Microsoft Net Framework Optional Intel C600 Chipset X9DRD 7LN4F LSI MegaRAID Storage Manager Intel Rapid Storage Technology Enterprise Intel PRO Network Connections Drivers Trusted Platform Module Driver Optional SUPERMICRO SuperDoctor III SUPERMICRO Computer Inc Build driver diskettes and manuals Browse CD I Auto Start Up Next Time For m
48. d and Enabled MECI Multiple Event Count Increment Enter the increment value for the multiple event counter Enter a number from 1 to 255 The default setting is 1 METW Multiple Event Count Time Window This item allows the user to decide how long in minutes should the multiple event counter wait before generating a new event log Enter a number from 0 to 99 The default setting is 60 View SMBIOS Event Log This item allows the user to view the event in the SMBIOS event log Select this item and press lt Enter gt to view the status of an event in the log Date Time Error Code Severity 7 26 Chapter 7 BIOS 7 5 IPMI Select the IPMI Intelligent Platform Management Interface tab to access the fol lowing submenu items IPMI Firmware Revision This item indicates the IPMI firmware revision used in your system IPMI Status This item indicates the status of the IPMI firmware installed in your system gt System Event Log Enabling Disabling Options SEL Components Select Enabled for all system event logging at bootup The options are Enabled and Disabled Erasing Settings Erase SEL Select Yes On next reset to erase all system event logs upon next system reboot Select Yes On every reset to erase all system event logs upon each system reboot Select No to keep all system event logs after each system reboot The options are No Yes On next reset and Yes On every reset 7 27 SUPERSTORAGESYSTEM 60
49. d to better cool and protect the system 5 1 Handling the Serverboard Electrostatic Discharge ESD can damage electronic components To prevent dam age to any printed circuit boards PCBs it is important to handle them very carefully see previous chapter To prevent the serverboard from bending keep one hand under the center of the board to support it when handling The following measures are generally sufficient to protect your equipment from electric static discharge Precautions Use a grounded wrist strap designed to prevent Electrostatic Discharge ESD Touch a grounded metal object before removing any board from its antistatic bag Handle a board by its edges only do not touch its components peripheral chips memory modules or gold contacts When handling chips or modules avoid touching their pins Put the serverboard add on cards and peripherals back into their antistatic bags when not in use For grounding purposes make sure your computer chassis provides excellent conductivity between the power supply the case the mounting fasteners and the serverboard 5 1 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Unpacking The serverboard is shipped in antistatic packaging to avoid electrical static dis charge When unpacking the board make sure the person handling it is static protected 5 2 Connecting Cables Several cables need to be connected to the serverboard These include the
50. data cables for the peripherals and control panel and the power cables Connecting Data Cables The cables used to transfer data from the peripheral devices have been carefully routed to prevent them from blocking the flow of cooling air that moves through the system from front to back If you need to disconnect any of these cables you should take care to keep them routed as they were originally after reconnecting them make sure the red wires connect to the pin 1 locations The following data cables with their locations noted should be connected See the layout on page 5 10 for connector locations Control Panel cable JF1 USB cable for front side access USB4 5 Important Make sure the the cables do not come into contact with the fans Connecting Power Cables The X9DRD 7LN4F JBOD has a 24 pin primary power supply connector JPW1 for connection to the ATX power supply In addition there are two 8 pin 12V processor power connectors JPW2 and JPW3 that must be connected to your power supply See Section 5 9 for power connector pin definitions Connecting the Control Panel JF1 contains header pins for various front control panel connectors See Figure 5 1 for the pin locations of the various front control panel buttons and LED indicators All JF1 wires have been bundled into a single cable to simplify this connection Make sure the red wire plugs into pin 1 as marked on the board The other end connects to the Control Panel
51. ding two or more si multaneously may cause the rack to become unstable Server Precautions Review the electrical and general safety precautions in Chapter 4 Determine the placement of each component in the rack before you install the rails Install the heaviest server components on the bottom of the rack first and then work up Use a regulating uninterruptible power supply UPS to protect the server from power surges voltage spikes and to keep your system operating in case of a power failure Allow any hot plug drives and power supply modules to cool before touching them Always keep the rack s front door and all panels and components on the servers closed when not servicing to maintain proper cooling 2 2 Chapter 2 Server Installation Rack Mounting Considerations Ambient Operating Temperature If installed in a closed or multi unit rack assembly the ambient operating tempera ture of the rack environment may be greater than the ambient temperature of the room Therefore consideration should be given to installing the equipment in an environment compatible with the manufacturer s maximum rated ambient tempera ture Tmra Reduced Airflow Equipment should be mounted into a rack so that the amount of airflow required for safe operation is not compromised Mechanical Loading Equipment should be mounted into a rack so that a hazardous condition does not arise due to uneven mechanical loading
52. drives The backplane is already preconfigured so there are no jumpers or switches present on it 6 7 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Changing the CD ROM or DVD ROM and HDD Trays The SC846 chassis supports the following drive configuration options Position Description Position A N A Default or single 3 5 HDD tray or dual 2 5 HDD tray Position B Dummy cover default or single 3 5 HDD tray single 2 5 HDD tray DVD or FDD After selecting one of the drive configuration options listed above use the following instructions to install the drives and their trays into the chassis Installing the Hard Drive Figure 6 6 Drive Location Options 1 Power down and unplug the system from the outlet 2 Remove the chassis cover 3 Install the HDD into the hard drive tray using four round head screws 6 32 and two Mylar washers Chapter 6 Advanced Chassis Setup Figure 6 7 Securing the HDD into the HDD Tray 4 Lower the drive and tray into the chassis carefully inserting the lower rubber lined holes onto the pins at the base of the chassis and aligning the upper rubber holes with the holes in the chassis 5 Use the two drive tray screws with Mylar washers to secure the hard drive and drive tray on the standoff power supply cage Figure 6 8 Installing the HDD and HDD Tray in the Chassis 6 9 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 6 Connect the pow
53. e Chassis Cover Remove this screw if necessary Figure 6 2 Removing the Chassis Cover Release Tab Removing the Chassis Cover You may need to gain access to the inside of the server to perform various main tenance tasks 1 Press the release tabs to remove the cover from the locked position Press both tabs at the same time 2 Once the top cover is released from the locked position slide the cover toward the rear of the chassis 3 Lift the cover off the chassis without the cover in place The chassis cover must be in place to allow Warning Except for short periods of time do NOT operate the server proper airflow and prevent overheating 6 3 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 6 4 System Fans Three 8 cm hot swap chassis fans and two 8 cm exhaust fans provide the cooling for the SuperServer 6047R E1R24L It is very important that the chassis top cover is properly installed and making a good seal in order for the cooling air to circulate properly through the chassis and cool the components See Figure 6 3 System Fan Failure Fan speed is controlled by system temperature via a BIOS setting If a fan fails the remaining fans will ramp up to full speed and the overheat fan fail LED on the control panel will turn on Replace any failed fan at your earliest convenience with the same type and model the system can continue to run with a failed fan Remove the top chassis cover while th
54. e a deren 6 6 Hard Drive Backplane siaii itte enters 6 7 Changing the CD ROM or DVD ROM and HDD Trays sss 6 8 Removing the Air Shroud Power SuUpDIY e Power Supply FalilutG ctr neret edet Attaching a JBOD Expansion Chassis seen 6 13 6 7 Chapter 7 BIOS 7 1 7 2 7 8 7 4 7 5 7 6 7 7 7 8 Introduction Starting BIOS Setup Utilily ttr nr eren tee 7 1 How To Change the Configuration Data see 7 2 Starting the Setup Utility esee 7 2 Main Setup errare Er e ee d PO e EUR ERE ees 7 2 Advanced Setup Configurations eese 7 4 Event Logs IPMES S eol nce EI MUI sl C Security REX dci MH 7 91 Appendix A BIOS Error Beep Codes Appendix B System Specifications viii Chapter 1 Introduction Chapter 1 Introduction 1 1 Overview The 6047R E1R24L is a high end storage system comprised of two main subsys tems the SC846E16 R920B 4U rack mount chassis and the X9DRD 7LNAF JBOD dual processor serverboard Please refer to our web site for information on operating systems that have been certified for use with the system www supermicro com In addition to the serverboard and chassis various hardware components have been included with the 6047R E1R24L as listed below e Two passive CPU heatsinks
55. e system is still running to determine which of the fans has failed Replacing System Fans Removing a Fan 1 Remove the top chassis cover while the system is still running to determine which of the fans has failed 2 Depress the tab on the side of the fan to unlock and remove the fan along with its housing The fan s power connections will automatically detach 3 System power does not need to be shut down since the fans are hot plugga ble 4 Replace the failed fan with an identical 8 cm 12 volt fan available from Supermicro 5 Position the new fan into the space vacated by the failed fan previously re moved A click can be heard when the fan is fully installed in place and the power connections are made 6 If the system power is on the hot plug feature will cause the fan to start im mediately upon being connected to its header on the serverboard Rear Exhaust Fans The two rear exhaust fans are also hot swappable To remove depress the tab on the side of the fan to unlock it then pull it staight up and out of the chassis 6 4 Chapter 6 Advanced Chassis Setup Figure 6 3 Replacing System Cooling Fans 6 5 Drive Bay Installation Removal Accessing the Drive Bays SATA Drives You do not need to access the inside of the chassis or remove power to replace or swap SATA drives Proceed to the next step for instructions Note You must use standard 1 high drives in the SuperServer 6047R E1R24L DVD ROM Fl
56. ect Enabled for extended terminal resolution support The options are Dis abled and Enabled Legacy OS Redirection Resolution Use this feature to select the number of rows and columns used in Console Redirection for legacy OS support The options are 80x24 and 80x25 7 19 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Putty KeyPad This feature selects Function Keys and KeyPad settings for Putty which is a terminal emulator designed for the Windows OS The options are VT100 LINUX XTERMR6 SCO ESCN and VT400 Serial Port for Out of Band Management Windows Emergency Management Services EMS The submenu allows the user to configure Console Redirection settings to support Out of Band Serial Port management Console Redirection for EMS Select Enabled to use a COM Port selected by the user for Console Redirection The options are Enabled and Disabled gt Console Redirection Settings for EMS This feature allows the user to specify how the host computer will exchange data with the client computer which is the remote computer used by the user Out of Band Management Port The feature selects a serial port used by the Microsoft Windows Emergency Management Services EMS to communicate with a remote server The options are COM1 and COM2 SOL Terminal Type This feature allows the user to select the target terminal emulation type for Con sole Redirection Select VT100 to use the ASCII character set Select VT100 to
57. ed to support Intel Virtualization Technology which will allow one platform to run multiple operating systems and applications in independent parti tions creating multiple virtual systems in one physical computer The options are Enabled and Disabled Note If there is any change to this setting you will need to power off and restart the system for the change to take effect Please refer to Intel s website for detailed information 7 7 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual gt CPU Power Management Configuration This submenu allows the user to configure the following CPU Power Manage ment settings Power Technology Select Energy Efficiency to support power saving mode Select Custom to cus tomize system power settings Select Disabled to disable power saving settings The options are Disabled Energy Efficient and Custom If the option is set to Custom the following items will display EIST Available when Power Technology is set to Custom EIST Enhanced Intel SpeedStep Technology allows the system to au tomatically adjust processor voltage and core frequency to reduce power consumption and heat dissipation The options are Disabled GV3 Disabled and Enabled GV3 Enabled Note GV3 is Intel Speedstep support used on older platforms Please refer to Intel s website for detailed information Turbo Mode Available when Power Technology is set to Custom Select Enabled to use the Turbo Mode to boost s
58. eeps standby power supplied to the system Therefore the system power cord should be unplugged before performing service 3 3 Control Panel LEDs The control panel located on the front of the chassis has several LEDs These LEDs provide you with critical information related to different parts of the system This section explains what each LED indicates when illuminated and any corrective action you may need to take 3 1 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual wily Wi Power Fail Indicates a power supply module has failed The second power supply module will take the load and keep the system running but the failed module will need to be replaced Refer to Chapter 6 for details on replacing the power supply This LED should be off when the system is operating normally 3 Overheat Fan Fail When this LED flashes it indicates a fan failure When on continuously it indicates an overheat condition which may be caused by cables obstructing the airflow in the system or the ambient room temperature being too warm Check the routing of the cables and make sure all fans are present and operating normally You should also check to make sure that the chassis covers are installed Finally verify that the heatsinks are installed properly see Chapter 5 This LED will remain flashing or on as long as the indicated condition exists ES NIC1 Indicates network activity on the LAN1 port when flashing Eri NIC2 Indicates ne
59. er and customer shall be governed by the laws of Santa Clara County in the State of California USA The State of California County of Santa Clara shall be the exclusive venue for the resolution of any such disputes Super Micro s total liability for all claims will not exceed the price paid for the hardware product FCC Statement This equipment has been tested and found to comply with the limits for a Class A digital device pursuant to Part 15 of the FCC Rules These limits are designed to provide reasonable protection against harmful interference when the equipment is operated in a commercial environ ment This equipment generates uses and can radiate radio frequency energy and if not installed and used in accordance with the manufacturer s instruction manual may cause harmful interference with radio communications Operation of this equipment in a residential area is likely to cause harmful interference in which case you will be required to correct the interference at your own expense California Best Management Practices Regulations for Perchlorate Materials This Perchlorate warn ing applies only to products containing CR Manganese Dioxide Lithium coin cells Perchlorate Material special handling may apply See www dtsc ca gov hazardouswaste perchlorate WARNING Handling of lead solder materials used in this product may expose you to lead a chemical known to the State of California to cause birth defects and other repro ductive harm
60. er and data cables from the drive to other chassis compo nents including the motherboard and power distributor board Figure 6 9 Hard Drive and Hard Drive Tray Installed in the Chassis 6 10 Chapter 6 Advanced Chassis Setup Removing the Air Shroud Under most circumstances you will not need to remove the air shroud to perform any service on the system However if you need to temporarily remove it the air shroud sould always be in place when the system is operating please follow this procedure Air shrouds concentrate airflow to maximize fan efficiency The SC846 chassis air shroud does not require screws to set up Installing the Air Shroud 1 Confirm that your air shroud matches your chassis model Each shroud is labeled SC846LP SC846RC or SC846U 2 Place air shroud in the chassis The air shroud fits behind the two fans clos est to the power supply Figure 6 10 Removing the Air Shroud 8 8 9 4 4 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 6 6 Power Supply The SuperServer 6047R E1R24L has an 920 watt redundant power supply con sisting of two power modules Each power supply module has an auto switching capability which enables it to automatically sense and operate at a 100V 240V input voltage Power Supply Failure If either of the two power supply modules fail the other will take the full load and allow the system to continue operation without interruption The Power Fail LED will illumin
61. erial Over LAN and COM P Serial Port Console Redirection COM1 COM2 SOL These two submenus allow the user to configure the following Console Redirection settings for a COM Port specified by the user Console Redirection Select Enabled to use a COM Port selected by the user for Console Redirection The options are Enabled and Disabled The default setting for COM1 is Disabled and for COM2 SOL is Enabled P Console Redirection Settings This feature allows the user to specify how the host computer will exchange data with the client computer which is the remote computer used by the user Terminal Type This feature allows the user to select the target terminal emulation type for Con sole Redirection Select VT100 to use the ASCII Character set Select VT100 to add color and function key support Select ANSI to use the Extended ASCII Char acter Set Select VT UTF8 to use UTF8 encoding to map Unicode characters into one or more bytes The options are VT100 VT100 VT UTF8 and ANSI Bits Per second Use this feature to set the transmission speed for a serial port used in Console Redirection Make sure that the same speed is used in the host computer and the 7 18 Chapter 7 BIOS client computer A lower transmission speed may be required for long and busy lines The options are 9600 19200 38400 57600 and 115200 bits per second Data Bits Use this feature to set the data transmission size for Console Redirection
62. etwork activ ity system overheat fan fail and power supply failure A main power button and a system reset button are also included In addition two USB ports and a COM port have been incorporated into the front of the chassis for convenient access Cooling System The SC846E16 R920B chassis includes three 8 cm hot plug system cooling fans located in the middle section of the chassis An air shroud channels the airflow from the system fans to efficiently cool the processors and memory Two additional 8 cm fans are located at the back of the chassis to expel hot air from the system Each power supply module also includes a cooling fan 1 3 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Figure 1 1 Intel C602J Chipset System Block Diagram Note This is a general block diagram Please see Chapter 5 for details SATA GenB ea SATA bps TA SATA Gera eSATA cbos Q1 23 EE gz REAR REAR 45 6 89 Chapter 1 Introduction Figure 1 2 X9DRD 7LN4F JBOD Serverboard USB6 ib SUPER X9DRD 7 J
63. g Memory Modules CPU Corresponding DIMM Modules CPU1 P1 P1 P1 P1 P1 P1 P1 P1 DIMMA1 DIMMB1 DIMMC1 DIMMD1 DIMMA2 DIMMB2 DIMMC2 DIMMD2 CPU2 P2 P2 P2 P2 P2 P2 P2 P2 DIMME DIMMF1 DIMMG1 DIMMH1 DIMME2 DIMM F2 DIMMG2 DIMMH2 Processor and Memory Module Population for Optimal Performance Number of CPU and Memory Population Configuration Table CPUs DIMMs For memory to work properly please follow the instructions below 1 CPU amp CPU1 2 DIMMs P1 DIMMA1 P1 DIMMB1 1CPU amp CPU1 4 DIMMs P1 DIMMA1 P1 DIMMB1 P1 DIMMC1 P1 DIMMD1 1 CPU amp CPU1 5 8 DIMMs P1 DIMMA1 P1 DIMMB1 P1 DIMMC1 P1 DIMMD1 Any memory pairs in P1 DIMMA2 P1 DIMMB2 P1 DIMMC2 P1 DIMMD2 slots 2 CPUs amp CPU1 CPU2 4 DIMMs P1 DIMMA1 P1 DIMMB1 P2 DIMME1 P2 DIMMF1 2 CPUs amp CPU1 CPU2 6 DIMMs P1 DIMMA1 P1 DIMMB1 P1 DIMMC1 P1 DIMMD1 P2 DIMME1 P2 DIMMF1 2 CPUs amp CPU1 CPU2 8 DIMMs P1 DIMMA1 P1 DIMMB1 P1 DIMMC1 P1 DIMMD1 P2 DIMME1 P2 DIMMF1 P2 DIMMG1 P2 DIMMH1 2 CPUs amp CPU1 CPU2 10 16 DIMMs P1 DIMMA1 P1 DIMMB1 P1 DIMMC1 P1 DIMMD1 P2 DIMME1 P2 DIMMF 1 P2 DIMMG1 P2 DIMMH1 Any memory pairs in P1 P2 DIMM slots 2 CPUs amp CPU1 CPU2 16 DIMMs P1 DIMMA1 P1 DIMMB1 P1 DIMMC1 P1 DIMMD1 P2 DIMME1 P2 DIMMF 1 P2 DIM MG1 P2 DIMMH1 P1 DIMMA2 P1 DIMMB2 P1 DIMMC2 P1 DIMMD2 P2 DIMME2 P2 DIMMF2 P2 DIMMG2 P2 DIMMH2 Intel E5 2600 Series Processor UDIMM Memory Support Ranks Per Memory Capacity Speed MT s and Voltage Validated by Slot per C
64. h the installation by fully tightening all four screws Screw 3 Screw 2 Motherboard 5 7 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Removing the Heatsink Warning We do not recommend that the CPU or the heatsink be removed AN However if you do need to uninstall the heatsink please follow the instruc tions below to uninstall the heatsink to prevent damage done to the CPU or the CPU socket 1 Unscrew the heatsink screws from the serverboard in the sequence as shown in the illustration below 2 Gently wriggle the heatsink to loosen it from the CPU Do not use excessive force when wriggling the heatsink 3 Once the heatsink is loosened remove it from the CPU 4 Remove the used thermal grease and clean the surface of the CPU and the heatsink Reapply the proper amount of thermal grease on the surface before reinstalling the heatsink Do not reuse old thermal grease Loosen screws Screw 1 in sequence as shown Screw 4 Screw 3 AN Warning Do not reuse old thermal grease 5 8 Chapter 5 Advanced Serverboard Setup 5 5 Installing Memory CAUTION Exercise extreme care when installing or removing DIMM modules to prevent any possible damage Memory Support The X9DRD 7LN4F JBOD has 16 DIMM slots that can support 512 GB of ECC DDR3 Registered memory RDIMM or up to 128 GB of ECC non ECC DDR3 Unbuf fered memory UDIMM For best performance install pairs of memory modules of
65. hannel DIMM amp Per DIMM SPC and DIMM Per Channel DPC Data Width See the Note below 1 Slot Per Channel 2 Slots Per Channel 1DPC 1DPC 2DPC 1 35V 1 5V 1 35V 1 5V 1 35V 1 5V SRx8 1GB 2GB 4GB NA 1066 1333 NA 1066 NA 1066 Non ECC 1600 1333 1333 DRx8 2GB 4GB 8GB NA 1066 1333 NA 1066 NA 1066 Non ECC 1600 1333 1333 SRx16 512MB 1GB 2GB NA 1066 1333 NA 1066 NA 1066 Non ECC 1600 1333 1333 SRx8 ECC 1GB 2GB 4GB 1066 1066 1333 1066 1066 1066 1066 1333 1600 1333 1333 1333 DRx8 ECC 2GB 4GB 8GB 1066 1066 1333 1066 1066 1066 1066 1333 1600 1333 1333 1333 Note For detailed information on memory support and updates please refer to the SMC Recommended Memory List posted on our website at http www supermicro com support resources mem cfm 5 10 Chapter 5 Advanced Serverboard Setup Intel E5 2600 Series Processor RDIMM Memory Support Ranks Memory Capacity Speed MT s and Voltage Validated by Slot per Channel SPC and Per Per DIMM DIMM Per Channel DPC DIMM amp Data See the Note Below 1 Slot Per Channel 2 Slots Per Channel Width 1DPC 1DPC 2DPC 1 35V 1 5V 1 35V 1 5V 1 35V 1 5V SRx8 1GB 2GB 4GB 1066 1066 1333 1066 1066 1333 1066 1066 1333 1333 1600 1333 600 1333 1600 DRx8 2GB 4GB 8GB 1066 1066 1333 1066 11066 1333 1066 1066 1333 1333 1600 1333 1600 1333 1600 SRx4 2GB 4GB 8GB 1066 1066 1333 1066
66. he drive carrier straight out Installing a Hard Drive to the Hard Drive Tray 1 Remove the two screws securing the dummy drive to the drive tray and remove the dummy drive Place the hard drive tray on a flat surface such as a desk table or work bench see Figure 6 4 2 Slide the hard drive into the tray with the printed circuit board side facing down 3 Carefully align the mounting holes in both the drive tray and the hard drive 4 Secure the hard drive to the tray using six screws 5 Replace the drive tray into the chassis Make sure to close the drive tray handle to lock the drive tray into place see Figure 6 5 Warning Enterprise level hard disk drives are recommended for use in AN Supermicro chassis and servers For information on recommended HDDs visit the Supermicro Web site at http www supermicro com products nfo files storage SAS 1 CompList 110909 pdf VAN Important Regardless of how many hard drives are installed all drive carriers must remain in the drive bays to maintain proper airflow 6 6 Chapter 6 Advanced Chassis Setup Figure 6 4 Mounting a SATA Drive in a Carrier Figure 6 5 Installing a Drive Carrier Hard Drive Backplane The hard drives plug into a backplane that provides power drive ID and bus termi nation A RAID controller can be used with the backplane to provide data security The operating system you use must have RAID support to enable the hot swap capability of the SATA
67. iate sections of the manual for their installation Chapter 3 System Interface Refer here for details on the system interface which includes the functions and information provided by the control panel on the chassis as well as other LEDs located throughout the system Chapter 4 System Safety You should thoroughly familiarize yourself with this chapter for a general overview of safety precautions that should be followed when installing and servicing the 6047R E1R24L SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Chapter 5 Advanced Serverboard Setup Chapter 5 provides detailed information on the XYDRD 7LN4F JBOD serverboard including the locations and functions of connections headers and jumpers Refer to this chapter when adding or removing processors or main memory and when reconfiguring the serverboard Chapter 6 Advanced Chassis Setup Refer to Chapter 6 for detailed information on the SC846E16 R920B chassis You should follow the procedures given in this chapter when installing removing or reconfiguring SATA or peripheral drives and when replacing system power supply units and cooling fans Chapter 7 BIOS The BIOS chapter includes an introduction to BIOS and provides detailed informa tion on running the CMOS Setup Utility Appendix A BIOS Error Beep Codes Appendix B System Specifications Preface Notes SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Table of Contents Chapter 1 Introduction
68. igned IP addresses automatically if DHCP is selected or can be configured manually if Static is selected Station IP Address This item displays the Station IP address for this computer This should be in decimal and in dotted quad form i e 192 168 10 253 Subnet Mask This item displays the sub network that this computer belongs to The value of each three digit number separated by dots should not exceed 255 Station MAC Address This item displays the Station MAC address for this computer Mac addresses are 6 two digit hexadecimal numbers 7 28 Chapter 7 BIOS Gateway IP Address This item displays the Gateway IP address for this computer This should be in decimal and in dotted quad form i e 192 168 10 253 7 6 Boot This submenu allows the user to configure the following boot settings for the system Boot Option Priorities Boot Option 1 Boot Option 2 Boot Option 3 etc Use this feature to specify the sequence of boot device priority Network Devices Hard Disk Drives Use these options to set the order of the legacy network and hard drive devices detected by the motherboard gt Delete Boot Option This feature allows the user to select a EFI boot device to delete from the boot priority list Delete Boot Option Select the desired boot device to delete 7 29 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 7 7 Security This menu allows the user to configure the following security se
69. ils Installing the Chassis into a Rack Installing the Chassis into a Rack 1 Confirm that chassis includes the inner rails A also confirm that the outer rails B are installed on the rack Align chassis rails A with the front of the rack rails B Slide the chassis rails into the rack rails keeping the pressure even on both sides you may have to depress the locking tabs when inserting When the server has been pushed completely into the rack you should hear the locking tabs click into the locked position Tighten up all the screws on the front side and rear side of both outer rails Optional Insert and tightening the thumbscrews that hold the front of the server to the rack 2 8 Chapter 3 System Interface Chapter 3 System Interface 3 1 Overview There are several LEDs on the control panel as well as others on the SCSI drive carriers to keep you constantly informed of the overall status of the system as well as the activity and health of specific components There are also two buttons on the chassis control panel 3 2 Control Panel Buttons The two push buttons located on the front of the chassis are in order from left to right a reset button and a power on off button RESET Reset Use the reset button to reboot the system Power This is the main power button which is used to apply or turn off the main system power Turning off system power with this button removes the main power but k
70. indirect special incidental or consequential damage arising from a BIOS update If you have to update the BIOS do not shut down or reset the system while the BIOS is being updated to avoid possible boot failure 7 2 Main Setup When you first enter the AMI BIOS Setup utility you will enter the Main setup screen You can always return to the Main setup screen by selecting the Main tab on the top of the screen The Main BIOS Setup screen is shown below Chapter 7 BIOS The AMI BIOS Main menu displays the following information System Date System Time Use this option to change the system time and date Highlight System Time or System Date using the arrow keys Enter new values through the keyboard and press lt Enter gt Press the lt Tab gt key to move between fields The date must be entered in Day MM DD YY format The time is entered in HH MM SS format Note The time is in the 24 hour format For example 5 30 P M appears as 17 30 00 Supermicro X9DRD 7LN4F JBOD Version This item displays the SMC version of the BIOS ROM used in this system Build Date This item displays the date that the BIOS Setup utility was built Memory Information Total Memory This displays the amount of memory that is available in the system 7 3 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 7 8 Advanced Setup Configurations Select the Advanced tab to access the following submenu items gt Boot Feature Quiet Boot
71. ity uses a key based navigation system called hot keys Most of the AMI BIOS setup utility hot keys can be used at any time during setup navigation These keys include F3 F4 Enter lt ESC gt arrow keys etc Note 1 Options printed in Bold are default settings Note 2 F3 is used to load optimal default settings F4 is used to save the settings and exit the setup utility 7 1 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual How To Change the Configuration Data The configuration data that determines the system parameters may be changed by entering the AMI BIOS Setup utility This Setup utility can be accessed by pressing lt Delete gt at the appropriate time during system boot Note For AMI UEFI BIOS Recovery please refer to the UEFI BIOS Re covery User Guide posted Qhttp www supermicro com support manuals Starting the Setup Utility Normally the only visible Power On Self Test POST routine is the memory test As the memory is being tested press the Delete key to enter the main menu of the AMI BIOS Setup utility From the main menu you can access the other setup screens An AMI BIOS identification string is displayed at the left bottom corner of the screen below the copyright message Warning Do not upgrade the BIOS unless your system has a BIOS related issue Flashing the wrong BIOS can cause irreparable damage to the sys tem In no event shall the manufacturer be liable for direct
72. lent metal conductors that can create short circuits and harm you if they come into contact with printed circuit boards or areas where power is present 4 2 Chapter 4 System Safety e After accessing the inside of the system close the system back up and secure it to the rack unit with the retention screws after ensuring that all connections have been made 4 3 ESD Precautions A Electrostatic discharge ESD is generated by two objects with different electrical charges coming into contact with each other An electrical discharge is created to neutralize this difference which can damage electronic components and printed circuit boards The following measures are generally sufficient to neutralize this difference before contact is made to protect your equipment from ESD e Use a grounded wrist strap designed to prevent static discharge Keep all components and printed circuit boards PCBs in their antistatic bags until ready for use Touch a grounded metal object before removing the board from the antistatic bag Do not let components or PCBs come into contact with your clothing which may retain a charge even if you are wearing a wrist strap Handle a board by its edges only do not touch its components peripheral chips memory modules or contacts When handling chips or modules avoid touching their pins Put the serverboard and peripherals back into their antistatic bags when not in use For grounding
73. ller PCI or Serial Console Redirection IPMI SOL X9 IPMI Error Codes 1 Continuous Beep System OH System Overheat A 1 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Notes Appendix B System Specifications Appendix B System Specifications Processors Single or dual Intel Xeon E5 2600 Series processors Note Please refer to our web site for a complete listing of supported processors Chipset Intel C602J chipset BIOS 128 Mb AMI SPI Flash ROM Memory Capacity Sixteen DIMM sockets supporting up to 512 GB of registered ECC DDR3 1333 1066 800 Registered memory RDIMM or up to 128 GB of ECC non ECC DDR3 Unbuffered memory UDIMM Note see Section 5 6 for details Drive Bays Sixteen hot swap drive bays to house SATA drives Peripheral Drive Bays One slim DVD ROM drive Expansion Slots Four PCI E 3 0 x16 slots one PCI E 3 0 x8 slot and one PCI E 3 0 x4 in a x8 slot Serverboard Chassis SUPERSTORAGESYSTEM 6047R E1R24L User s Manual SC846E R920B 4U rackmount Dimensions WxHxD 17 2 x 7 x 26 in 437 x 178 x 660 mm Weight Gross Bare Bone 78 Ibs 35 5 kg System Cooling Three 8 cm system fans Two 8 cm exhaust fans One air shroud System Input Requirements AC Input Voltage 100 240V AC auto range Rated Input Current 13 4A max Rated Input Frequency 50 to 60 Hz Power Supply Rated Output Power 920W Part PWS 920P 1R Rated Output Voltages 12V 75A 5Vsb 4A
74. lly or vertically and do not rub the CPU against any pins of the socket which may damage the CPU or the socket SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Warning You can only install the CPU to the socket in one direction Make sure that the CPU is properly inserted into the socket before closing the AN load plate If it doesn t close properly do not force it as it may damage your CPU Instead open the load plate again and double check that the CPU is aligned properly 7 With the CPU in the socket in spect the four corners of the CPU Gently close the load plate to make sure that they are flush with the socket 8 Close the load plate Lock the lever labeled Close 1st then lock the lever labeled Open 1st Use your thumb to gently push the load levers down until the lever locks Push down and lock the level labeled Close 1st Push down and lock the lever labeled Open 1st 5 6 Chapter 5 Advanced Serverboard Setup Installing a Passive CPU Heatsink 1 Do not apply any thermal grease to the heatsink or the CPU die the re quired amount has already been applied 2 Place the heatsink on top of the CPU so that the four mounting holes are aligned with those on the Serverboard s and the Heatsink Bracket underneath 3 Screw in two diagonal screws i e the 1 and the 2 screws until just snug do not over tighten the screws to avoid possible damage to the CPU 4 Finis
75. m Do not work alone when working with high voltage components Power should always be disconnected from the system when removing or in stalling main system components such as the serverboard memory modules and floppy drive When disconnecting power you should first power down the system with the operating system first and then unplug the power cords of all the power supply units in the system When working around exposed electrical circuits another person who is familiar with the power off controls should be nearby to switch off the power if neces sary Use only one hand when working with powered on electrical equipment This is to avoid making a complete circuit which will cause electrical shock Use extreme caution when using metal tools which can easily damage any electrical components or circuit boards they come into contact with Do not use mats designed to decrease static electrical discharge as protection from electrical shock Instead use rubber mats that have been specifically designed as electrical insulators The power supply power cords must include a grounding plug and must be plugged into grounded electrical outlets 4 1 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Serverboard Battery CAUTION There is a danger of explosion if the onboard battery is installed upside down which will reverse its polarites see Figure 4 1 This battery must be replaced only with the same or an equivalent type recom me
76. n Definitions TPM Header Port 80 Pin Definition Pin Definition 1 LCLK 2 GND A Trusted Platform Module Port 80 3 LERAME 4 KEY header is located at JTPM1 to provide 5 LRESET 6 45V X TPM support and a Port 80 connec 7 LAD3 8 LAD 2 tion Use this header to enhance 9 43 3V 10 LADI system performance and data secu 11 LADO 12 GND rity See the table on the right for pin 13 SMB CLK4 14 SMB DAT4 definitions 15 43V DUAL 16 SERIRQ 17 GND 18 CLKRUN X 19 LPCPD 20 LDRQ X 5 24 Chapter 5 Advanced Serverboard Setup 5 9 Jumper Settings Explanation of Jumpers To modify the operation of the serverboard jumpers can be used to choose between optional settings Jumpers create shorts between two pins to change the function of the con nector Pin 1 is identified with a square solder pad on the printed circuit board See the serverboard layout pages for jumper locations Note On a two pin jumper Closed means the jumper is on both pins and Open means the jumper is either on only one pin or completely removed Pins Jumper CMOS Clear JBT1 is used to clear CMOS which will also clear any passwords Instead of pins this jumper consists of contact pads to prevent accidentally clearing the contents of CMOS To clear CMOS 1 First power down the system and unplug the power cord s 2 With the power disconnected short the CMOS pads with a metal object such as
77. nded by the manufacturer CR2032 Dispose of used batteries according to the manufacturer s instructions DVD ROM Laser CAUTION this server may have come equipped with a DVD ROM drive To prevent direct exposure to the laser beam and hazardous radiation exposure do not open the enclosure or use the unit in any uncon ventional way Mainboard replaceable soldered in fuses Self resetting PTC Positive Tempera ture Coefficient fuses on the mainboard must be replaced by trained service technicians only The new fuse must be the same or equivalent as the one replaced Contact technical support for details and support 4 2 General Safety Precautions A Follow these rules to ensure general safety Keep the area around the 6047R E1R24L clean and free of clutter The 6047R E1R24L weighs approximately 75 lbs 34 1 kg when fully loaded When lifting the system two people at either end should lift slowly with their feet spread out to distribute the weight Always keep your back straight and lift with your legs Place the chassis top cover and any system components that have been re moved away from the system or on a table so that they won t accidentally be stepped on While working on the system do not wear loose clothing such as neckties and unbuttoned shirt sleeves which can come into contact with electrical circuits or be pulled into a cooling fan Remove any jewelry or metal objects from your body which are excel
78. nections for JLAN1 are on pins 11 and 12 of JF1 Attach an LED cable to display network activ ity See the table on the right for pin definitions HDD LED The HDD LED connection is located on pins 13 and 14 of JF1 This LED is used to display all IDE SAS SATA activity See the table on the right for pin definitions Chapter 5 Advanced Serverboard Setup PWR Fail LED Pin Definitions JF1 5 Vec Pin Definition 6 Ground OH Fan Fail LED Pin Definitions JF1 OH Fan Fail Indicator Status Pin Definition State Definition Off Normal 7 Vcc On Overheat 8 Ground Flash Fan Fail ing NIC2 LED Pin Definitions JF1 Pin Definition 9 Vcc 10 Ground NIC1 LED Pin Definitions JF1 Pin Definition 11 Vcc 12 Ground HDD LED Pin Definitions JF1 Pin Definition 13 Vec 14 HD Active 5 19 Power On LED The Power On LED connector is lo cated on pins 15 and 16 of JF1 use JLED for a 3 pin connector This connection is used to provide LED indication of power being supplied to the system See the table on the right for pin definitions NMI Button The non maskable interrupt button header is located on pins 19 and 20 of JF1 Refer to the table on the right for pin definitions Fan Headers There are eight fan headers on the serverboard all of which are 4 pin fans Pins 1 3 of
79. on nected to the power supply See the ile Ground table on the right for pin definitions 5 8 12V Required Connection Power Button Power Button The Power On connection is on pins Pin Definitions JF1 1 and 2 of JF1 These should be Pinf Definition connected to the chassis power but 1 Power Signal ton See the table on the right for pin 2 Ground definitions Reset Button Reset Button The Reset Button connection is Pin Definitions JF 1 located on pins 3 and 4 of JF1 and Pin Definition attaches to the reset switch on the 3 Reset computer chassis See the table on d Ground the right for pin definitions 5 18 Power Fail LED The Power Fail LED connection is located on pins 5 and 6 of JF1 Re fer to the table on the right for pin definitions Overheat Fan Fail PWR Fail LED Connect an LED to the OH connection on pins 7 and 8 of JF1 for the Over heat Fan Fail Power Fail and UID LED connections The red LED on pin 7 provides warning of overheat fan failure or power failure The blue LED on pin 8 works as the front panel UID LED indicator The red LED takes precedence over the blue LED by default Refer to the table on the right for pin definitions NIC2 JLAN2 LED The LED connections for JLAN2 are on pins 9 and 10 of JF1 Attach an LED cable to display network activ ity See the table on the right for pin definitions NIC1 JLAN1 LED The LED con
80. only be supplied to limited components such as RAMs to maintain the most critical functions of the system The options are Suspend Disabled and S1 CPU Stop Clock NUMA NON Uniform Memory Access This feature enables the Non Uniform Memory Access ACPI support The options are Enabled and Disabled High Precision Event Timer Select Enabled to activate the High Precision Event Timer HPET that produces periodic interrupts at a much higher frequency than a Real time Clock RTC does in synchronizing multimedia streams providing smooth playback reducing the de pendency on other timestamp calculation devices such as an x86 RDTSC Instruc tion embedded in the CPU The High Performance Event Timer is used to replace the 8254 Programmable Interval Timer The options are Enabled and Disabled P Trusted Computing Available when a TPM device is detected by the BIOS Configuration TPM Support Select Enabled on this item and enable the TPM jumper on the motherboard to enable TPM support to improve data integrity and network security The options are Enabled and Disabled TPM State Select Enabled to enable TPM security settings to improve data integrity and network security The options are Disabled and Enabled 7 21 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Pending Operation Use this item to schedule an operation for the security device The options are None Enable Take Ownership Disable Take Ownership and TPM Clea
81. oot when a non recoverable error occurs that lasts for more than five minutes The options are Enabled and Disabled Power Button Function If this feature is set to Instant Off the system will power off immediately as soon as the user presses the power button If this feature is set to 4 Seconds Override the system will power off when the user presses the power button for 4 seconds or longer The options are Instant Off and 4 Seconds Override Restore on AC Power Loss Use this feature to set the power state after a power outage Select Stay Off for the system power to remain off after a power loss Select Power On for the system power to be turned on after a power loss Select Last State to allow the system to resume its last state before a power loss The options are Stay Off Power On and Last State CPU Configuration This submenu displays the information of the CPU as detected by the BIOS It also allows the user to configure CPU settings P Socket 1 CPU Information Socket 2 CPU Information This submenu displays the following information regarding the CPUS installed in Socket 1 Socket 2 Type of CPU CPU Signature Microcode Patch CPU Stepping Maximum Minimum CPU Speed 7 5 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Processor Cores Intel HT Hyper Threading Technology Intel VT x Technology Intel SMX Technology L1 Data Cache L1 Code Cache 2 Cache e L3 Cache CPU Speed
82. oppy Disk Drive For installing removing the DVD ROM or floppy disk drive you will need to gain access to the inside of the server by removing the top cover of the chassis Proceed to the DVD ROM and Floppy Drive Installation section later in this chapter for instructions 5 25 Drive Bay For installing removing a component in the 5 25 drive bay proceed to the 5 25 Drive Bay Installation section later in this chapter for instructions plane with any metal objects and make sure no ribbon cables touch the Use caution when working around the backplane Do not touch the back backplane or obstruct the holes which aid in proper airflow 6 5 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual SATA Drive Installation Mounting a SATA Drive in a Drive Carrier The SATA drives are mounted in drive carriers to simplify their installation and removal from the chassis These carriers also help promote proper airflow for the drives For this reason even empty carriers without SATA drives installed must re main in the chassis To add a new SATA drive install a drive into the carrier with the printed circuit board side facing down so that the mounting holes align with those in the carrier Secure the drive to the carrier with four screws as shown in Figure 6 3 Installing Removing SATA Drives 1 To remove a SATA drive carrier first push the release button located beside the drive s LEDs 2 Swing the handle fully out and use it to pull t
83. ore information please visit SUPERMICRO s web site LEE Driver Tool Installation Display Screen Note Click the icons showing a hand writing on paper to view the readme files for each item Click the computer icons to the right of these items to install each item from top to the bottom one at a time After installing each item you must re boot the system before moving on to the next item on the list The bottom icon with a CD on it allows you to view the entire contents of the CD 5 29 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual SuperDoctor III The SuperDoctor III program is a Web base management tool that supports remote management capability It includes Remote and Local Management tools The local management is called SD III Client The SuperDoctor III program included on the CD ROM that came with your serverboard allows you to monitor the environment and operations of your system SuperDoctor III displays crucial system information such as CPU temperature system voltages and fan status See the Figure below for a display of the SuperDoctor Ill interface Note The default User Name and Password for SuperDoctor III is ADMIN ADMIN Note When SuperDoctor is first installed it adopts the temperature threshold set tings that have been set in BIOS Any subsequent changes to these thresholds must be made within SuperDoctor as the SuperDoctor settings override the BIOS settings To set the BIOS temperature threshold
84. ption ROM Select Select iSCSI to use the iSCSI Option ROM to boot the computer using a network device Select PXE Preboot Execution Environment to use an PXE Option ROM to boot the computer using a network device The options are PXE and iSCSI Load Onboard LAN1 LAN4 Option ROM Select Enabled to enable the onboard LAN1 Option ROM LAN4 Option ROM This is to boot the computer using a network device The default setting for LAN1 Option ROM is Enabled and the default setting for LAN2 LAN4 Option ROM is Disabled Load Onboard SAS Option ROM Select Enabled to use the onboard SAS Option ROM to boot the computer using a SAS device The options are Enabled and Disabled 7 16 Chapter 7 BIOS VGA Priority This feature allows the user to select the graphics adapter to be used as the primary boot device The options are Onboard and Offboard Network Stack Select Enabled enable PXE Preboot Execution Environment or UEFI Unified Extensible Firmware Interface for network stack support The options are Enabled and Disabled gt Super IO Configuration Super IO Chip This item displays the Super IO chip used in the motherboard P Serial Port 1 Configuration Serial Port Select Enabled to enable serial port 1 The options are Enabled and Disabled Device Settings This item displays the settings of Serial Port 1 Change Settings This option specifies the base I O port address and the Interrupt Request address of Serial Port 1
85. purposes make sure your computer chassis provides excellent conductivity between the power supply the case the mounting fasteners and the serverboard 4 3 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual 4 4 Operating Precautions A Care must be taken to assure that the chassis cover is in place when the 6047R E1R24L is operating to assure proper cooling Out of warranty damage to the system can occur if this practice is not strictly followed Figure 4 1 Installing the Onboard Battery LITHIUM BATTERY BATTERY HOLDER L Please handle used batteries carefully Do not damage the battery in any way a damaged battery may release hazardous materials into the environment Do not discard a used battery in the garbage or a public landfill Please comply with the regulations set up by your local hazardous waste management agency to dispose of your used battery properly Note a complete list of safety warnings is provided on the Supermicro web site at http super dev about policies safety_information cfm 4 4 Chapter 5 Advanced Serverboard Setup Chapter 5 Advanced Serverboard Setup This chapter covers the steps required to connect the data and power cables and install add on cards All serverboard jumpers and connections are also described A layout and quick reference chart are included in this chapter for your reference Remember to completely close the chassis when you have finished working with the serverboar
86. r Note During restart the computer will reboot in order to execute the pend ing operation and change the state of the security device Current Status Information This item displays the information regarding the current TPM status TPM Enable Status This item displays the status of TPM Support to indicate if TPM is currently enabled or disabled TPM Active Status This item displays the status of TPM Support to indicate if TPM is currently ac tive or deactivated TPM Owner Status This item displays the status of TPM Ownership gt Intel TXT LT SX Configuration Intel TXT LT SX Hardware Support This feature indicates if the following hardware components support the Intel Trusted Execution Technology CPU TXT Trusted Execution Technology Feature Chipset TXT Trusted Execution Technology Feature Intel TXT LT SX Configuration This feature displays the following TXT configuration setting TXT LT SX Support This item indicates if the Intel TXT support is enabled or disabled The default setting is Disabled Intel TXT LT SX Dependencies This feature displays the features that need to be enabled for the Intel Trusted Execution Technology to work properly in the system VT d Support Intel Virtualization Technology with Direct I O support VT Support Intel Virtualization Technology support 7 22 Chapter 7 BIOS TPM Support Trusted Platform support TPM State Trusted Platform state ME S
87. r sell such products for use in such ultra hazardous applications it does so entirely at its own risk Furthermore buyer agrees to fully indemnify defend and hold Supermicro harmless for and against any and all claims demands actions litigation and proceedings of any kind arising out of or related to such ultra hazardous use or sale B 4
88. re 2 2 Installing the Rails Installing the Inner Rails on the Chassis Installing the Inner Rails 1 Place the inner rails on the side of the chassis aligning the hooks of the chas sis with the inner rail holes Make sure that the rail faces outward so that it will fit with the rack s mounting bracket 2 Slide the rail toward the front of the chassis 3 Secure the rail to the chassis with four screws as illustrated 4 Repeat steps 1 3 for the other inner rack rail SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Secure to the Front of the Rack Secure to the Attach Outer Racks Together Rear ot me aes Figure 2 3 Assembling the Outer Rails Installing the Outer Rails onto a Rack Installing the Outer Rails 1 Attach the short bracket to the outside of the long bracket You must align the pins with the slides Also both bracket ends must face the same direction 2 Adjust both the short and long brackets to the proper distance so that the rail fits snugly into the rack 3 Secure the long bracket to the front side of the outer rail with two M5 screws and the short bracket to the rear side of the outer rail with three M5 screws 4 Repeat steps 1 4 for the remaining outer rail 2 6 Chapter 2 Server Installation Figure 2 4 Installing the Outer Rails to the Server Rack SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Figure 2 5 Installing the Rack Ra
89. rolled by the firmware management via IPMI 2 0 The options are Performance Balanced Performance Balanced Energy and Energy Efficient Factory Long Duration Power Limit This item displays the power limit in watts set by the manufacturer during which long duration power is maintained Long Duration Power Limit This item displays the power limit in watts set by the user during which long duration power is maintained The default setting is 0 Factory Long Duration Maintained This item displays the period of time in seconds set by the manufacturer during which long duration power is maintained Long Duration Maintained This item displays the period of time in seconds during which long duration power is maintained The default setting is 0 Recommended Short Duration Power This item displays the short duration power settings in watts recommended by the manufacturer Short Duration Power Limit During Turbo Mode the system may exceed the processors default power setting and exceed the Short Duration Power limit By increasing this value the proces sor can provide better performance for short duration This item displays the time period during which short duration power is maintained The default setting is 0 7 9 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual gt Chipset Configuration gt North Bridge This feature allows the user to configure the settings for the Intel North Bridge gt Integrated IO Configur
90. sembly 5 rrr ener eio tenerent Identifying the Inner Rack Falls i retener neta rere nenes Installing the Inner Rails on the Chassis Installing the Outer Rails onto a Rack sssss Installing the Chassis into a Rack aene Chapter 3 System Interface 3 1 nu meeatey te 3 2 Control Panel Buttons vi Table of Contents 9 4 Drive Carrier EBDS e iiie endet tete as 3 3 Chapter 4 System Safety 4 1 Electrical Safety Precautions ricette re bien 4 1 4 2 General Safety Precautions esee 4 2 4 3 ESD Preca tions oiecni ere ato mete iie aae 4 3 4 4 Operating Precautiors conten dra ettet e t ed cas 4 4 Chapter 5 Advanced Serverboard Setup 5 1 Handling thi S rverboard o itt ied de eres diens P Hn Unpacklng nter rn tri entere rere ER Re 52 Connecting Cabl88 e i eee neta eerie rbi hm emis Connecting Data Cables tiroir ete aues p ipd Eee La Connecting Power Cables sssssseeeeeeneeeeneee emen Connecting the Control Panel 5 3 Rear W O Potts eite b idis iei air HERES ERR nenstesces 5 4 Installing the Processor and Heatsink seeeeee 5 4 Installing an LGA2011 Processor sssssseeemee e 5 4 Installing a Passive CPU Heatsink 4 2 nennt 5 7 Removing the FHeatsink ocior rete rt tr rix ero Fe ces cobs nt
91. settings again you would first need to uninstall SuperDoctor Supero Doctor Ill Interface Display Screen Health Information SuperDoctor III Remote Management System Info Health Info Performance 1 Health Information Ren Fan1 CPU Fan3 5 30 Chapter 5 Advanced Serverboard Setup Supero Doctor Ill Interface Display Screen Remote Control SuperDoctor III Remote Management ystem Info Health Info Performance 1 Remote Control Graceful power control cancelable Supero Doctor III allows a user to inform the OS to reboot or shut down the system within 30 seconds On the system console a pop up window will appear with a message telling the local user to save his working files Before the system reboots or shuts down it s allowed to cancel the action either locally or remotely Power control noncancelable Supero Doctor III allows a user to inform the OS to reboot or shut down the system right away The system will reboot or shut down without any warning messages It s not allowed to cancel the action il Note The SuperDoctor IIl program and User s Manual can be downloaded from the Supermicro web site at http www supermicro com products accessories software SuperDoctorlll cfm For Linux we recommend using SuperDoctor II 5 31 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Notes 5 32 Chapter 6 Advanced Chassis Setup Chapter 6 Advanced Chassis
92. shield for the PCI slot you wish to populate Fully seat the card into the slot pushing down with your thumbs evenly on both sides of the card Finish by using a screw to secure the top of the card shield to the chassis The PCI slot shields protect the serverboard and its components from EMI and aid in proper ventilation so make sure there is always a shield covering each unused slot 5 14 Chapter 5 Advanced Serverboard Setup 5 7 Serverboard Details Figure 5 4 XYDRD 7LN4F JBOD Layout em Em di a B b b d Pm 1j El Pren E g Sog uoisuedx3 GOP SX OE HOA ZIONS Thd gt COE TE SUPER X9DRD 7 J LNAF Rev LOL EO 9 LSASA LSASO 3 Pema Hiat 4 2 i Ei Baca Iz Txula UBAT LIGOLI uda Yd URW ud DDBOOBBOOBBSg LIOGOBUCBDBOLCUD G
93. the fan headers are backward compatible with the traditional 3 pin fans Fan speed control is supported with 4 pin fans only See the table on the right for pin definitions The onboard fan speeds are controlled by IPMI ATX PS 2 Keyboard and PS 2 Mouse Ports The ATX PS 2 keyboard and the PS 2 mouse are located beside the USBO 1 ports The mouse port is above the keyboard port See the table on the right for pin definitions Chassis Intrusion The Chassis Intrusion header is des ignated JL1 Attach an appropriate cable from the chassis to inform you of a chassis intrusion when the chas sis is opened 5 20 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Power LED Pin Definitions JF1 Pin Definition 15 sv Stby 16 Control NMI Button Pin Definitions JF1 Pin Definition 19 Control 20 Ground Fan Header Pin Definitions FAN1 8 Pin Definition 1 Ground Black 12V Red 2 3 Tachometer 4 PWR Modulation PS 2 Keyboard and Mouse Port Pin Definitions Pin Definition 1 Data NC Ground VCC Clock o a A CQ m NC Chassis Intrusion Pin Definitions Pin Definition il Intrusion Input 2 Ground Chapter 5 Advanced Serverboard Setup Ethernet Ports Four Ethernet ports are located on the I O backplane A dedicated IPMI LAN port is also included to provide KVM support for IPMI 2 0 These ports ac
94. the same type and speed Please refer to our web site for any updates to supported memory All channels will run at the fastest common frequency DIMM Installation Installing Memory Modules 1 Insert the desired number of DIMMs into the memory slots starting with P1 DIMMA1 See the Memory Installation Tables on the following pages 2 Insert each DIMM module vertically into its slot Pay attention to the notch along the bottom of the module to avoid installing incorrectly see Figure 5 3 3 Use your thumbs to gently press down on both ends of the DIMM module until it snaps into place in the slot Repeat for all modules 4 Press the release tabs to the locked positions to secure the DIMM module into the slot Figure 5 3 DIMM Installation Notch Notch To Install Insert module vertically and press down until it snaps into place Pay attention to the alignment notch at Front View the bottom Y To Remove Use your thumbs to Notch should align with the receptive key point on the gently push the release slot tabs near both ends of Release Tab Release Tab the module This should Y release it from the slot Top View of DDR3 Slot 5 9 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual DIMM Module Population Tables Processors and their Correspondin
95. ttings for the system Password Check Use this feature to determine when a password entry is required Select Setup to require the password only when entering setup Select Always to require the pass word when entering setup and on each boot The options are Setup and Always Administrator Password Use this feature to set the Administrator Password which is required to enter the BIOS setup utility The length of the password should be from 3 to 20 characters long 7 30 Chapter 7 BIOS 7 8 Save amp Exit This submenu allows the user to configure the Save and Exit settings for the system Discard Changes and Exit Select this option to quit the BIOS Setup without making any permanent changes to the system configuration and reboot the computer Select Discard Changes and Exit and press lt Enter gt When the dialog box appears asking you if you want to exit the BIOS setup without saving select Yes to quit BIOS without saving the changes or select No to quit the BIOS and save changes Save Changes and Reset When you have completed the system configuration changes select this option to save the changes and reboot the computer so that the new system configuration settings can take effect Select Save Changes and Exit and press lt Enter gt When the dialog box appears asking you if you want to exit the BIOS setup without sav ing select Yes to quit BIOS without saving the changes or select No to quit the BIOS
96. twork activity on the LAN2 port when flashing 3 2 Chapter 3 System Interface 0 HDD Indicates IDE channel activity On the SuperServer 6047R E1R24L this LED indicates hard and or DVD ROM drive activity when flashing lt gt S Power Indicates power is being supplied to the system s power supply units This LED should normally be illuminated when the system is operating 3 4 Drive Carrier LEDs Each drive carrier has two LEDs Green When illuminated the green LED on the front of the drive carrier indi cates drive activity A connection to the backplane enables this LED to blink on and off when that particular drive is being accessed Red The SAF TE compliant backplane activates the red LED to indicate a drive failure If one of the drives fail you should be notified by your system management software Please refer to Chapter 6 for instructions on replacing failed drives 3 3 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Notes Chapter 4 System Safety 4 1 Chapter 4 System Safety Electrical Safety Precautions A Basic electrical safety precautions should be followed to protect yourself from harm and the SuperServer 6047R E1R24L from damage Be aware of the locations of the power on off switch on the chassis as well as the room s emergency power off switch disconnection switch or electrical outlet If an electrical accident occurs you can then quickly remove power from the syste
97. ubsystem This feature displays the following ME Subsystem Configuration settings ME BIOS Interface Version ME Version iSCSI Configuration This item displays iSCSI configuration information iSCSI Initiator Name This item displays the name of the iSCSI Initiator which is a unique name used in the world The name must use IQN format The following actions can also be performed Add an Attempt Delete Attempts Commit Discard Changes and Exit Change Attempt Order Commit Discard Changes and Exit Intel Ethernet Controller 1350 Gigabit Network Connection These items display the following information on the Intel I350 Gigabit network connections FP NIC Configuration Link Speed Use this feature to change the link speed and duplex for the current port The op tions are AutoNeg 10Mbps Half 10Mbps Full 100Mbps Half and 100Mbps full Wake on LAN Select enabled to wake the system with a magic packet The options are En abled and Disabled 7 23 SUPERSTORAGESYSTEM 6047R E1R24L User s Manual Blink LEDs This feature allows the user to specify the duration for LEDs to blink The range is from 0 15 seconds The default setting is 0 PORT CONFIGURATION INFORMATION This section displays the following port information UEFI Driver Adapter PBA Chip Type PCI Device ID PCI Bus Device Function Link Status Factory MAC Address Alternate MAC Address 7 24 Chapter 7 BIOS 7 4 Event
98. will allow the user to change a hardware component or device without shutting down the system The options are Enabled and Disabled Staggered Spin Up Select Enabled to enable Staggered Spin up support to prevent excessive power consumption caused by multiple HDDs spinning up simultaneously The options are Enabled and Disabled RAID Mode The following items are displayed when RAID Mode is selected SATA RAID Option ROM Use this feature to determine which SATA RAID device the system will boot from The options are Legacy and EFI Port 0 5 Hot Plug Select Enabled to enable hot plug support for the particular port The options are Enabled and Disabled gt PCle PCI PnP Configuration PCI ROM Priority Use this feature to select the Option ROM to boot the system when there are multiple Option ROMs available in the system The options are Legacy ROM and EFI Compatible ROM PCI Latency Timer Use this feature to set the latency Timer of each PCI device installed on a PCI bus Select 64 to set the PCI latency to 64 PCI clock cycles The options are 32 64 96 128 160 192 224 and 248 Above 4G Decoding Available if the system supports 64 bit PCI decoding Select Enabled to decode a PCI device that supports 64 bit in the space above 4G Address The options are Enabled and Disabled PERR Generation Select Enabled to allow a PCI device to generate a PERR number for a PCI Bus Signal Error Event The options are Enabled and Disabled
99. ystem performance The options are Enabled and Disabled C1E Support Available when Power Technology is set to Custom Select Enabled to enable Enhanced C1 Power State to boost system per formance The options are Enabled and Disabled CPU C3 Report Available when Power Technology is set to Custom Select Enabled to allow the BIOS to report the CPU C3 State ACPI C2 to the operating system During the CPU C3 State the CPU clock generator is turned off The options are Enabled and Disabled CPU C6 Report Available when Power Technology is set to Custom Select Enabled to allow the BIOS to report the CPU C6 State ACPI C3 to the operating system During the CPU C6 State the power to all cache is turned off The options are Enabled and Disabled CPU C7 Report Available when Power Technology is set to Custom Select Enabled to allow the BIOS to report the CPU C7 State ACPI C3 to the operating system CPU C7 State is a processor specific low C State The options are Enabled and Disabled 7 8 Chapter 7 BIOS Package C State limit Available when Power Technology is set to Custom This feature allows the user to set the limit on the C State package register The options are CO C2 C6 and No Limit Energy Performance Bias Use this feature to select an appropriate fan setting to achieve maximum system performance with maximum cooling or maximum energy efficiency with maxi mum power saving The fan speeds are cont

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